Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00920 ATGGTTTCGCCCGAAAGTACCAATTGGCTCTTTGACTACGGATTGATCGACGATATCCCTGTCTCGGATGCGGCTTTCCCCTTCGCGAATTCCAGTTTCTCTTGGTCTTTGCAGCCTCTCGACGGCTCCTCTAGTGCCAGTTTGGAAATTGAAGGATCTCTAGGGGAAACAGATTGCCTCAAGGAACCGGGCTCAAAGAAGAGAGTCAGACCAGAATCCAATTGTGCATCTAGCTCCAAGGCATGTAGAGAGAAGTTGCGGAGGGACAAGCTGAATGACAAGTTCCTGGAATTGGGTGCTATATTGGAGCCTGGAAGGCCGCCCAAAACAGACAAGGTAGCTATATTGAACGATGCCATCCGAATGGTAACCCAGATGAGGACTGAAGCTCAGAAGCTGAAAGACTCAAATTCAAGTCTACAGGAGAAGATTAAAGAGCTGAAGGTGGAGAAAAATGAGCTTCGTGATGAGAAACAAAGGCTAAAAGTAGAGAAGGAGAAACTGGAGCAACAAATGAAATCTATGAATACCCCGCCCAGCTTCATGTCACCTACTGCAATTTCAGCGGCATTTGGTGCTCCTGGCCAAGCTCCTGGCAATAAGTTGGTGCCTTTCATGGGGTACCCAGGAGTTGCCATGCTAGAAGTGGGCTGGGCGTGCAACTGGGACATGGAAATGGGTTGGCCCTGGGCTTGGATTCGGGCTGGACATACTGGATTGAAGTCTGCTGAATTGGCTTGGGCTGGCCTTGGTATACAATGGGCTGAGACGAGTAAAAGTGGGTTTGCTGGGTTCAGCATGAAAGTCAGCTGGGCTCTTCCTCCAATTGGGCTGTTGGGCATGGAATTGGGACGTTGGCAGGGGTTTTTTATGTGTTGGTCGTGTTCTTGGGTAGGCATGAATTGGGCTGAAACGTGGAGTACAATGGACTGGGCATGGAGCTGGGTGACTTGGGATACAAGTGGTTTGGGCTTAGGGATGAAGATGTCTGGGCATGGCATTGTATTGGAGTTGGCTGGGTGTGGAAGTGGCTGGCTGTTATTGGAAAGGATGTGGGCTTGA 1062 49.91 MVSPESTNWLFDYGLIDDIPVSDAAFPFANSSFSWSLQPLDGSSSASLEIEGSLGETDCLKEPGSKKRVRPESNCASSSKACREKLRRDKLNDKFLELGAILEPGRPPKTDKVAILNDAIRMVTQMRTEAQKLKDSNSSLQEKIKELKVEKNELRDEKQRLKVEKEKLEQQMKSMNTPPSFMSPTAISAAFGAPGQAPGNKLVPFMGYPGVAMLEVGWACNWDMEMGWPWAWIRAGHTGLKSAELAWAGLGIQWAETSKSGFAGFSMKVSWALPPIGLLGMELGRWQGFFMCWSCSWVGMNWAETWSTMDWAWSWVTWDTSGLGLGMKMSGHGIVLELAGCGSGWLLLERMWA 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28223111 28226070 - BLOR18852 Blo07g00920 63444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00920 353 CDD bHLH_AtILR3_like 80 155 - -
Blo07g00920 353 PANTHER TRANSCRIPTION FACTOR ILR3 1 214 - -
Blo07g00920 353 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Blo07g00920 353 PANTHER BHLH TRANSCRIPTION FACTOR 1 214 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Blo07g00920 353 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 80 151 IPR036638 GO:0046983
Blo07g00920 353 SMART finulus 81 132 IPR011598 GO:0046983
Blo07g00920 353 Coils Coil 116 174 - -
Blo07g00920 353 Gene3D - 77 153 IPR036638 GO:0046983
Blo07g00920 353 CDD bZIP 141 173 - -
Blo07g00920 353 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Blo07g00920 353 MobiDBLite consensus disorder prediction 57 79 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01435 Blo07g00920 CCT
Blo03g01435 Blo07g00920 ECH
Blo07g00920 Blo10g00804 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01435 Blo-Chr3:40925272 Blo07g00920 Blo-Chr7:28223111 1.47E-108 dispersed
Blo07g00920 Blo-Chr7:28223111 Blo15g00649 Blo-Chr15:18034416 2.47E-19 dispersed
Blo02g00106 Blo-Chr2:755710 Blo07g00920 Blo-Chr7:28223111 1.22E-64 transposed
Blo10g00804 Blo-Chr10:25399348 Blo07g00920 Blo-Chr7:28223111 3.04E-129 wgd
Blo07g00920 Blo-Chr7:28223111 Blo08g00166 Blo-Chr8:1909684 2.54E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12644 PF00010 HLH 8.30E-09 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00920 - - pper:18778871 323.553