Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00935 GAAGAAGAAGAGGAGGAGGAAGAAGAAGAAAGTTACCGAAGTGGAGACAGCAAAAAGAGAAATTGTTACAAAAATGAGTGGTCATTAGGAGGTGTTTTGGATCCAAGAGCCAGATGGGTTCAAGACTGGAATAGGGTTTTCCTCCTAGTCTGCGCCACAGGCCTCTTTGTGGACCCACTTTTTTTCTACGCCCTGTCAATAAGCGACGCCTATATGTGTCTCTTCATCGATGGCTGGTTTGCCATCACCGTGACGGCGCTCAGGTGCATGACGGATGCCCTGCACGTGTGGAACATGTGGTTGCAGCTGAAAATGGTGAAGAGGTTCTCGTTTGGCAATATAGGAGCTGTGGAAGAAGCGGAAAGTGGTGGAATTATGAGGGATTATGGAAGTCCTCGCTCTGTCGCTCTTCGTTACCTGAAGGCTAAAAAGGGTTTCTTCTTTGATCTCTTTGTTATTCTTCCGCTACCCCAGTTGGTATTATGGGTAGCAATTCCAAGGCTGTTGAAAAGAGGATCAGTAACAATGGTGATGACAGTCTTTCTAATAATATTTCTCTTCCAATACCTTCCCAAAATCTATCATTCTGTCTGTCTCTTACGTCGCATGCAGAATCTCTCTGGCTACATTTTCGGAACTGTCTGGTGGGGTATTGCATTAAATATGATAGCCTATTTTGTTGCTGCCCATGCAGCAGGAGCGTGTTGGTATCTGCTAGGGATTCAAAGGGCAGATAAGTGTTTGAAAGAGGAATGCAGAGAAGCAGAAGGGTCGTGTAATCCAAGAGTGTTGGCTTGTAAAGAAGCCATTTTTTATGGGGCAACGAGCATGGTGGGAGAGAGGTCAGAGAGATTTGCATGGGCTGTGAACAAGAAAGCAAGGTCTATGTGTTTGGAAAGTGCAGAGAACTATAACTATGGAGCTTATAAATGGAGTGTTCAGCTTGTCACTAATGATAGTCGCTTGGAGAAGATTCTTTTCCCAATCTTTTGGGGTTTGATGACTCTCAGCACATTTGGGAACTTGGAAAGCACGACAGAATGGCTAGAAATTGTCTTCAACGTCATTGTATTAACGAGTGGGCTACTTTTAGTGACCATGTTGATCGGAAATATTAAGGTGTTTTTACATGCAACTACGTCCAAGAAACAAGCCATGCAGTTAAAGATGAGGAATATAGAGTGGTGGATGAGGAAGAGGTACTTGCCTCATGGATTCCGGCAACGTGTTCGGAACTACGAGCGGCAAAGATGGGCAGCCATGCGTGGAGTTGACGAGTGTGAGATGATCAGAAACCTGCCAGAGGGCCTACGGAGAGATATCAAGTACCATTTGTGCTTGGATTTGGTGAGACAGGTGCCATTATTCCAACACATGGATGATCTAGTTCTTGAAAACATTTGTGACCGAGTAAAGTCTCTCATTTTCACCAAGGGTGAAACGATAGCCAGAGAAGGAGACCCAGTTCAAAGAATGTTGTTTGTAGTAAGAGGCCATCTTCAGAGCAGCCAAGTTCTAAGAGATGGAGTCAAAAGTTGTTGCATGTTAGGCCCTGGAAATTTCAGTGGAGATGAGCTTCTCTCATGGTGTCTTAGAAGACCATTTATGGAAAGATTACCTCCATCGTCCTCGACTCTCGTCACTCTCGAGACCACCGAGGCCTTCGGCCTGGAGGCCAAAGACGTAAAATACGTGACCCAACATTTTCGTTACACATTCATGAACGAAAAAGTCAAGCGAAGTGCGAGATATTACTCGCCCGGCTGGAGGACTTGGGCTGCAGTTGCAATTCAGCTAGCTTGGAGAAGATACAAGCATAGATTGACGCTTTCATCCTTGTCGTTTATTCGCCCTCGTCGGCCGCTGTCTCGATCATCATCGAAAAGCGAAGACAGGCTGAGGCTCTACACTGCTTTGCTCACTTCTCCGAAGCCTAATCAAGAAGACAATGATTTT 1956 45.4 EEEEEEEEEESYRSGDSKKRNCYKNEWSLGGVLDPRARWVQDWNRVFLLVCATGLFVDPLFFYALSISDAYMCLFIDGWFAITVTALRCMTDALHVWNMWLQLKMVKRFSFGNIGAVEEAESGGIMRDYGSPRSVALRYLKAKKGFFFDLFVILPLPQLVLWVAIPRLLKRGSVTMVMTVFLIIFLFQYLPKIYHSVCLLRRMQNLSGYIFGTVWWGIALNMIAYFVAAHAAGACWYLLGIQRADKCLKEECREAEGSCNPRVLACKEAIFYGATSMVGERSERFAWAVNKKARSMCLESAENYNYGAYKWSVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTEWLEIVFNVIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRYLPHGFRQRVRNYERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFMERLPPSSSTLVTLETTEAFGLEAKDVKYVTQHFRYTFMNEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLSSLSFIRPRRPLSRSSSKSEDRLRLYTALLTSPKPNQEDNDF 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28557646 28577482 - BLOR18867 Blo07g00935 63459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00935 652 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 2 649 - -
Blo07g00935 652 CDD CAP_ED 455 561 IPR000595 -
Blo07g00935 652 SUPERFAMILY cAMP-binding domain-like 381 569 IPR018490 -
Blo07g00935 652 ProSiteProfiles cAMP/cGMP binding motif profile. 455 565 IPR000595 -
Blo07g00935 652 Pfam Cyclic nucleotide-binding domain 476 563 IPR000595 -
Blo07g00935 652 Gene3D Helix hairpin bin 380 446 - -
Blo07g00935 652 Gene3D Jelly Rolls 453 571 IPR014710 -
Blo07g00935 652 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 649 - -
Blo07g00935 652 Pfam Ion transport protein 43 372 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Blo07g00935 652 SUPERFAMILY Voltage-gated potassium channels 35 376 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00935 Blo-Chr7:28557646 Blo14g00625 Blo-Chr14:11893334 2.57E-124 dispersed
Blo07g00935 Blo-Chr7:28557646 Blo11g00564 Blo-Chr11:5370958 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00935 K05391 - zju:107430493 1076.23