Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00980 ATGAAGATTCAATGCAACGTCTGTGAGACGGCGGAGGCGCACGTTCTATGTTGCGCTGACGAGGCGGCGCTATGCTGGGCTTGCGACATGAAGGTTCACGCAGCCAACAAACTGGCTAGCAAGCACCAGAGGGTTCCTCTCTCTGGCTCTTCTTCCCAAATGCCCAAATGCGACATTTGCCAGGAGATGGGTGGCTACATCTTCTGTTTGGAGGATCGAGCTTTACTCTGCCGAAAATGTGATGTCGCCATCCACACGGTGAATACATATGTGTCGGCACATCAGAGGTTTCTTCTCACTGGTGTCAAAGTCAGTCTTGAACCCGCCGGACCTCCTACTTCCTCTTCTGAATCAAAGCCTCAGACGGGAGAGAAAGTGTTGGAACCGAAGTCTGGCTCAGGGCCTCCGATGAGCTTCTCAATGGCATCAGTTGGTGAATTCGGTCAACAGTTGCCTGTAAGTTCTCGTGGGGTAGGGGACTACACGCAGACTAAGGTCACAACACATAATGGAGGATTCGTATCGGGTGGGATTCATCAGTGGCAATTAGACGAGTTAATGGGGATGACGGGATTCAGTCAAAATTATGGCTTGGGCTATATGGACAATGATTCATCAAAGGCTGATAGCGGTAAGCTCGGGGACTCTGATTCGTCCATTCTAAGAACTGGCGAGGAAGATATTGAAGATGACGAGTGCTTGGGTCAGGTGCCGGATGCTTTGTGGGCGGTTCCTCACAACCCGTCTCCGCCTACTGCCTCCGGCCTGTATTGGCCAAGAAATTACAACACTTTGTTGGATAGCTCGGTCTATGTTCCTGACATATACAGCTCACCCGAGCAAAGGCCCCACCATCATCGACGAAATGGTGAAAGAGGGAGGAAGAAGATGGTTGAATATCAGATGAATCTTACAGATTGTTGGGAATTTGTGTCGATTTATGTGGTAGAGAGAGCAACATTCTCAAAACTTAGCTCAAGTTTTAACCTTTTTTCCTTGTGA 1002 49.2 MKIQCNVCETAEAHVLCCADEAALCWACDMKVHAANKLASKHQRVPLSGSSSQMPKCDICQEMGGYIFCLEDRALLCRKCDVAIHTVNTYVSAHQRFLLTGVKVSLEPAGPPTSSSESKPQTGEKVLEPKSGSGPPMSFSMASVGEFGQQLPVSSRGVGDYTQTKVTTHNGGFVSGGIHQWQLDELMGMTGFSQNYGLGYMDNDSSKADSGKLGDSDSSILRTGEEDIEDDECLGQVPDALWAVPHNPSPPTASGLYWPRNYNTLLDSSVYVPDIYSSPEQRPHHHRRNGERGRKKMVEYQMNLTDCWEFVSIYVVERATFSKLSSSFNLFSL 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29282753 29284668 + BLOR18912 Blo07g00980 63504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00980 333 Pfam B-box zinc finger 53 94 IPR000315 GO:0008270
Blo07g00980 333 MobiDBLite consensus disorder prediction 108 139 - -
Blo07g00980 333 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 291 - -
Blo07g00980 333 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Blo07g00980 333 PANTHER B-BOX ZINC FINGER PROTEIN 18 1 291 - -
Blo07g00980 333 SMART bboxneu5 4 47 IPR000315 GO:0008270
Blo07g00980 333 SMART bboxneu5 52 99 IPR000315 GO:0008270
Blo07g00980 333 CDD Bbox1_BBX-like 5 47 - -
Blo07g00980 333 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Blo07g00980 333 Gene3D Classic Zinc Finger 1 93 - -
Blo07g00980 333 CDD Bbox1_BBX-like 56 99 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01583 Blo-Chr1:55642228 Blo07g00980 Blo-Chr7:29282753 2.97E-07 dispersed
Blo04g00532 Blo-Chr4:4583064 Blo07g00980 Blo-Chr7:29282753 2.80E-43 dispersed
Blo06g00321 Blo-Chr6:18407264 Blo07g00980 Blo-Chr7:29282753 4.55E-22 dispersed
Blo07g00980 Blo-Chr7:29282753 Blo18g00789 Blo-Chr18:22814417 1.20E-35 dispersed
Blo07g00980 Blo-Chr7:29282753 Blo07g00983 Blo-Chr7:29356810 2.39E-117 proximal
Blo01g00195 Blo-Chr1:2610431 Blo07g00980 Blo-Chr7:29282753 1.87E-42 transposed
Blo07g00112 Blo-Chr7:1568502 Blo07g00980 Blo-Chr7:29282753 4.79E-44 transposed
Blo10g00720 Blo-Chr10:22822165 Blo07g00980 Blo-Chr7:29282753 1.34E-154 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12648 PF00643 zf-B_box 8.70E-06 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00980 - - jre:109011878 379.022