Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00982 ATGAATCGCTGCTTCTCCACTCCACTCCAATTCCTGGTTCTTTCTCTCTCCATCAGCTTCTTCCTCGCCACACCTGTCTTCTCCGCCGTTCTTCCTCCCGAAGAAGACAGTGATCTCACCCGGAACTATCTGAACGGCTCAATTCCGCCGGAATGGGGAAACTCCATGACTCTCCTCGCCATTTCTCTTCTTGGCAACCGTTTGACTGGTTCGGTGCCAAAAGAGCTCGGAAAGATCCTCACTCTTCAAAGCCTGGTGCTCCAAGCGAGTGGACTCAGTGGGCCAATTCCTTCTGGCATATCACTTTTGAGCAAAGTGACTGATTTGAGGATCAGTGACTTCATTGGATCTGCAGAATCTTTTCCTCCCATTAGTAATATGAAGCAATTGAAAATACTAGACCTTAGCTTTAACATGCTACAAGGGCCAATTCCTAGTGACTATGTTGCTCTTCGAAAAGTGGATAATTTGAAAGGTCTTGATGTTGTGATAGTATGTTATTCCGTTGATAGGATTTTAACTGGAAACATGCTCAATGGATCAGTGCCTGATTGGATGCTCCAAGGAAGTACAGATAGCTTGGTACTAACCTGGTTTCTGTTTACAGCTATTTATTCAGTGCATATAAATTGTGGTGGAAAGCAAACAACAATCAATGGAACTATTGTTTTTGTCGATGATATGAATGATATTAGATCAACAGGGTTTGTTGAAAGTAGTTACAATTGGGGAATTAGTAATACGGCTATCTTCATGGACGATGACCGCTCACCTGACTCCTACATTTGGACAAACTCATCTGTGCTCTCAGTGACAACCAATCCTCAACTATATACAACAGCACGCCTCTCTGCGCTCTCTCTTACATATTATGGGTATTGTCTTGGAAATGGACCGTACACTGTTCAACTCCACTTTGCTGAGATAATGTTTACTAATGGTATGACATTTAGCAGTCTTGGTAGGCGCATATTTGATGTTTACATTCAGGGAAAGCTGGTGCTGGGGAATTTTGATATTGCAAGGGAAGCAGGTGGAGTTGGCATGGCAGTGGTGAAAAGCTTTCCCATCAATATTACAGATGGTACCTTTGAGATTCGTTTCTATTGGGCCGGAAAGGGGACAAATGCTATTCCAGTGAGAGGAGTCTATGGCCCTCTAATTTCAGCCATTTCAGTAGTTTCTGACTCTGAGCCTCCAGCACAAGCAGAAGAAGATAGCAATAGAATGTCAGCCGGGGTGGTTGTTGGAATTGTAGCTGCAGTGCTAGTCATGATATTGCTCATTCTAGGAGTCTTGTGGTGGAAAGGCTGTATTGGAAAGAAAAACACAATGGACGAAGGTAATTAA 1350 43.41 MNRCFSTPLQFLVLSLSISFFLATPVFSAVLPPEEDSDLTRNYLNGSIPPEWGNSMTLLAISLLGNRLTGSVPKELGKILTLQSLVLQASGLSGPIPSGISLLSKVTDLRISDFIGSAESFPPISNMKQLKILDLSFNMLQGPIPSDYVALRKVDNLKGLDVVIVCYSVDRILTGNMLNGSVPDWMLQGSTDSLVLTWFLFTAIYSVHINCGGKQTTINGTIVFVDDMNDIRSTGFVESSYNWGISNTAIFMDDDRSPDSYIWTNSSVLSVTTNPQLYTTARLSALSLTYYGYCLGNGPYTVQLHFAEIMFTNGMTFSSLGRRIFDVYIQGKLVLGNFDIAREAGGVGMAVVKSFPINITDGTFEIRFYWAGKGTNAIPVRGVYGPLISAISVVSDSEPPAQAEEDSNRMSAGVVVGIVAAVLVMILLILGVLWWKGCIGKKNTMDEGN 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29321187 29330158 - BLOR18914 Blo07g00982 63506

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00982 449 Pfam Malectin domain 206 391 IPR021720 -
Blo07g00982 449 Gene3D Ribonuclease Inhibitor 9 206 IPR032675 -
Blo07g00982 449 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 87 - -
Blo07g00982 449 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 82 135 - -
Blo07g00982 449 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 203 364 - -
Blo07g00982 449 Gene3D - 207 398 - -
Blo07g00982 449 SUPERFAMILY L domain-like 38 199 - -
Blo07g00982 449 PANTHER BNAA01G29140D PROTEIN 29 87 - -
Blo07g00982 449 PANTHER BNAA01G29140D PROTEIN 82 135 - -
Blo07g00982 449 PANTHER BNAA01G29140D PROTEIN 203 364 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00982 - - - sind:105165468 377.096
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00982 Blo-Chr7:29321187 Blo13g00311 Blo-Chr13:17001392 9.47E-94 dispersed
Blo07g00981 Blo-Chr7:29286025 Blo07g00982 Blo-Chr7:29321187 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g892 . . . . . . . . . . . . . . . . . Bhi09g03561 . . . . . . . . . . . . . . . . . . . . . Blo07g00982 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0014720 0 0 2 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 3 2 0 0 0 0 5 15
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo07g00982 Blo_Chr07 FPKM 0.60781 1.019162 0.0 0.0 3.091877 0.955863 1.545194 0.0 0.0 0.0