Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00988 ATGATGGTTCTGCTTCATGCATACGTGCATAATGATGATTCTGCTTTGATCGCTCTGTTTCAAATATACGTGCAGGGATTTAAACCTGTTGAAAGAATAGATCTTGTAGGTGGATTGCCAGCAACTGCCTCCTCATCTCAGCATCACAGTCCATATGCTTCCTTCAATCCGAGCCCCAGTTCGTCCTCTTTTCCTAGTCCAGTCTCATCATCGTATACTGCTGCTAATCCTACAACGGATGGAAATTCCCTCATCCCTTGGCTTAAAAATCTTTCATCTGCCTCATCATCGGCCTCCTCTTCCAAGCGGCCCCACCTCTATATCCATGGAGGCTCTGTCAGTGCTCCAGTTACCCCACCCTTGAGCTCACCAAGTGCCAAAACACCCCGAATTAAAGCGAATTGGGAAGAACAGACCACACCCCCTGGTTGGACTGCTCAACACTACTCGATCCTACCATCTTCTACTCTACCAAGCCCTCCGTCTTCCACTCCACCAAGCCCTGGCCGCCAGATTTTTCCGGATCCAGAATGGTTTTCTGGAATTAGAATTCCTTACAGTGGACCAACTTCTCCAACATTCAGCCTTGTCTCTTCAAACCCATTTGGCTTTAAGGAAGAGGCTTTAACTGGTGGTGGATCGCGCATGTGGACTCCCGGGCAAAGCGGGACATGCTCTCCTGCCATTGCAGCAGGCTCTGATCACACTGCAGACATTCCAATGTCTGAACTTATTTCAGATGAGTTTGCATTTGGAAGCAATGCAGCTGGGATAGTTAAGCCTTGGGAAGGAGAGAGGATCCATGAAGATTCTGGATCGGATGATCTCGAGCTGACCCTTGGGAGTTCAAGGACAAGGTTTGATCTCACAACTGCTATTTCAAAGTCTTGA 891 48.15 MMVLLHAYVHNDDSALIALFQIYVQGFKPVERIDLVGGLPATASSSQHHSPYASFNPSPSSSSFPSPVSSSYTAANPTTDGNSLIPWLKNLSSASSSASSSKRPHLYIHGGSVSAPVTPPLSSPSAKTPRIKANWEEQTTPPGWTAQHYSILPSSTLPSPPSSTPPSPGRQIFPDPEWFSGIRIPYSGPTSPTFSLVSSNPFGFKEEALTGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSELISDEFAFGSNAAGIVKPWEGERIHEDSGSDDLELTLGSSRTRFDLTTAISKS 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29406779 29407669 - BLOR18920 Blo07g00988 63512

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00988 296 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 26 160 - -
Blo07g00988 296 Pfam BES1/BZR1 plant transcription factor, N-terminal 23 92 IPR008540 -
Blo07g00988 296 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 161 287 - -
Blo07g00988 296 MobiDBLite consensus disorder prediction 138 157 - -
Blo07g00988 296 MobiDBLite consensus disorder prediction 158 172 - -
Blo07g00988 296 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 161 287 IPR033264 GO:0003700|GO:0006351|GO:0009742
Blo07g00988 296 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 26 160 IPR033264 GO:0003700|GO:0006351|GO:0009742
Blo07g00988 296 MobiDBLite consensus disorder prediction 138 172 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00988 - - - tcc:18594295 392.119
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00988 Blo-Chr7:29406779 Blo10g00726 Blo-Chr10:22920767 3.74E-130 dispersed
Blo10g00723 Blo-Chr10:22876017 Blo07g00988 Blo-Chr7:29406779 8.92E-27 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo01g01552 . 122 407 BZR Transcription Factor Family AT1G75080 66.2 4.0e-90 328.6
Blo06g00124 . 28 307 BZR Transcription Factor Family AT1G75080 55.1 6.2e-75 278.1
Blo01g01552 . 122 405 BZR Transcription Factor Family AT1G19350 64.9 1.1e-90 330.5
Blo06g00124 . 28 304 BZR Transcription Factor Family AT1G19350 57.8 5.3e-74 275.0
Blo06g00124 . 2 301 BZR Transcription Factor Family AT3G50750 56.5 3.3e-74 275.4
Blo01g01552 . 90 404 BZR Transcription Factor Family AT3G50750 50.5 2.1e-60 229.6
Blo11g00263 BCT 112 363 BZR Transcription Factor Family AT4G18890 55.6 5.3e-56 214.5
Blo07g00988 . 76 286 BZR Transcription Factor Family AT4G18890 50.5 7.9e-44 174.1
Blo10g00726 . 173 377 BZR Transcription Factor Family AT4G18890 52.6 1.9e-42 169.5
Blo11g00263 BCT 1 363 BZR Transcription Factor Family AT1G78700 62.1 3.4e-102 368.6
Blo01g00870 BCT 1 355 BZR Transcription Factor Family AT1G78700 55.7 3.9e-98 355.1
Blo10g00726 . 1 377 BZR Transcription Factor Family AT1G78700 60.4 6.6e-98 354.4
Blo07g00988 . 28 286 BZR Transcription Factor Family AT1G78700 60.8 2.3e-66 249.6
Blo06g00124 . 28 201 BZR Transcription Factor Family AT4G36780 74.6 1.7e-59 226.5
Blo01g01552 . 122 301 BZR Transcription Factor Family AT4G36780 57.0 5.7e-39 158.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000940 3 4 6 4 3 2 4 2 2 2 2 2 4 2 2 4 2 3 4 2 2 2 2 2 2 2 2 6 3 3 85
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12649 PF05687 BES1_N 8.90E-08 No_clan Blo TF