Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01027 ATGGCGAACCCTCAGAAACCATGGAAACTGGAGTACGCTAAGTCGTCTCGATCCTCGTGTAAAACCTGCAAGAAAACCATTGACAAGGAGAAGCTCCGACTGGGTAAAATGGTTCAGGCCACTCAATTCGACGGCTTCATGCCTATGTGGAACCATGCTGACTGCATATTGAAGAAATCAAAGCAGATAAAATCAGTTGATGATGTTGAAGGAATTGAGTCGGTTCGATGGGAAGATCAGCAAAAGATTAGGAAATATGTGGAGGGAAATGAATCTTCAACTACAACTCCTGTCACACTGTTAGAGTGTGGAATTGAAGTTTCACATACTTCTCGTGCTGCTTGCAAGCACTGCAACCAAAAGATTATGAAAGGAGAGATTCGTGTGTACACAAAGTCTGATGGAAAAGGATCTAAAGCTCTGGGTTGGCATCATGTTAACTGCTTCATAGAACAGTCTCCATCTACCCAACTTGAGAAGTTATCTGGATGGGAGAGCCTCTCAGTCTCTGATCAGGCGTCTGTTACTTCCTTGGCTAAAAAGGTTCCTTCAACTGGGGAAAACGATCACAAGCAGCAACAGTCTGCTACTAAACCAACTACTAAACGTAGAAAAGATGAAGAAATTGCGAAGTCTAAATTTGGTAAAGTTGAAGGAGATGTGTCGGTGAGCAGGGTTGTGTCAGGTAACAATGCTCGAGATATGGGAGATCCAAATCCACAGTTAGCTGATTTAGAACAGAAACTGGAGGCTCAAACTAAAGCACTATGGGATCTGAAAGATGATCTGAAAAAGCATGTGCAAGTGGCAGAGCTGCGGGAAATACTTGAAATGAATGGTCAAGACTCAACAGGATCAGAACTTGATTTGCGTGATCGTTGTGCTGATGGGATGGTGTTTGGAGCTCTTGCTAGCTGCCCTATCTGTTCAGGGTCGCTTCGTTATTCTGGAGGAAGGTATGGTTGTCACGCCTATCAGTCTGCATGGAGCAAGTGTTCTTACTTGACTCGTGAGCCTGAACGTATAAAAGGAAGGTGGAAAGTCCCAGAAAACACAACTAATGAATATCTTCTCAAGTGGTTTAAATCACAAAAAGGTGTGAAGCCTGTTCGGATACTGCCTCCACAATTTTCTAGTTGTTCTTATAGAACGCTGGCCACTGACAGTCGGTCTCAAATATTGAAGAATGAAAGCTTGGCAGAGTTGAAAGATGAATGGAAAAGAAAAATTGAGGAGGAAGGAGGAGTTGTTCATTCCAAGATTAAGAAAGATACTAATTGCTTGGTTGTAAATGAAGCACAGGGTTCTTCGGACTCTGAGAAAATGAAGGCGAAGAGGATGAAAATACCAGTTGTGAGGGAGGAATATTTGGTAGAATGCTTTAAAAGAAAGCAGAAGCTTCCATTTGATTTTTACAAAATAGAATCCATCAGTGAGACCTCTAGTATGGTGACTACCATAAAAGTGAAAGGGCGAAGTGCTGTGCATGAAAATTCTGGTATGCAGGAGACAGGTCACGTACTTGAGGATGGTAAAAGTATTTACAATACAACATTGAACATGTCTGACTTATCAACTGGTATTAACAGCTATTATATCCTCCAAATCATCCAAGATGATAGAAGTTCAGATTGCTTTGTCTTCCGCAAATGGGGTCGAGTTGGGAATGAAAAGATTGGAGGAAACAAGATAGAAGAATTTTCAAAGTCTGATGCAATTCGTGAATTCAAGCGATTATTCCTTGAGAAGACGGGAAATTCATGGGAGGCTTGGGAAAAGAAACAAAATTTTCAGAAACAACCTGGAAGATTCTTCCCATTGGACATTGATTATGGGGTGAACAAACAAATGCAAAAGAAAAATGGCAAAGTGACAGAAAGTAAACTGCCGCCTTCATTAGCTCAGTTGATGAAGATGCTCTTCAATGTTGAAACATACAGAGCTGCCATGATGGAGTTTGAGATCAATTTGGCCGAGATGCCTCTGGGAAAACTCAGCAAAAATAATATACAGAAGGGTTTTGAGGCATTAACAGAAATACAGAATCTGTTAAACAGTAATATCCATGAACCTTCCATCAAAGAAAGCTTGATCATTGATGCCAGCAATCAGTTTTTCACCGTTATCCCTTCTATTCATCCGCACATAATCCGGGATGAGAATGATTTTAAATCTAAGGTAAAAATGTTAGAAGCTCTCCAGGACATCGAGATTGCTTCTCGATTAGTAGGTTTTGATGTTGATAATGATGACTCCCTTGATGAAAAGTATAAGAAGCTTCAATGTGATATCACTCCAATTCCCCATGATAGTGAAGATTATGAGTTAATTGAGAAGTATCTTCTCACTACTCACGCCCCAACTCATACGGAATGGTCTCTTGAGCTTGAAGAAGTTTTTACCCTTGATAGAGAGGGGGAATTGGATAAGTTTGCTCCTTATCGAGAGAAACTTAAGAACAGAATGCTCCTTTGGCATGGGTCACGATTAACAAACTTTATCGGAATACTTAGCCAAGGGCTGAGAATAGCCCCCCCTGAAGCCCCCGCTACTGGTTATATGTTTGGTAAAGGAATTTACTTTGCTGACTTGGTCAGCAAAAGCGCTCAGTATTGCTATACTAACAAGTCAAATCCTGTTGGGCTCATGCTTTTGAGTGAAGTAGCCTTGGGTGAGGTCTATGAACTCAAAAATGCTCAATATATGGAAAAGCCACCTGCAGGAAAGCATTCTACAAAAGGACTTGGAAAGAAAATACCTGCAGAATCCGAGCATGTAAAATGGAAGGACAATATCGTCGTTCCTTGTGGAAAACCAGTGGCATCGAAAGTTAGAGCTTCTGAATTGATGTATAATGAATATGTTGTCTATGAGACGGCTCAATTTCCAGCTGTTTCTTGTTCTGTTCTTGTAAACACAAAACTGGGTTCCCCTTCCATGGCGTCCAGCGCTGGCTCTCCTTGCGGAGCCTGCAAGTTTCTGAGGCGAAAGTGCGCGGCTGATTGCATATTTGCGCCACACTTTTGCTCTGAACAAGGGCCTGCTCGATTCGCTGCCATCCATAAAGTGTTTGGAGCGAGCAATGTTGCGAAGCTTTTGTTGCATGTTCCTGTTCCTGATCGGTGTGAGGCTGTTGTTACTATTTCTTATGAAGCTCAAGCTAGAATTAGAGATCCCGTTTATGGCTGTGTTTCTCATATCTTTGCCTTGCAACAACAGGTTGCATGCTTGCAAGCTCAACTAGCCCAAGCTAAGGCTCAACTGGCTCAAAAACTGAATGATCCTCACAAAGTAGAGAATCAATGGACTCTGAACGATTATGTTAATGGAGTTTCAAATTTTCCGACTTATCCTTCTTGCCTAGCAAACCCTATTTCCCCGCAGAGTTCAGTTGAATCCATGGATCACAGCAGTGAAGCGATGAATCTGCAGGAAATACAAAGCAGATCAGCAGAAGAGTTTCAGTTCCAGTCCTTCCGTAAGAAAAGGCCTTGTAATAGTGATGAACTTCAAGCATTGGCTTTCAGAATGATGAGGAGTTAA 3543 41.77 MANPQKPWKLEYAKSSRSSCKTCKKTIDKEKLRLGKMVQATQFDGFMPMWNHADCILKKSKQIKSVDDVEGIESVRWEDQQKIRKYVEGNESSTTTPVTLLECGIEVSHTSRAACKHCNQKIMKGEIRVYTKSDGKGSKALGWHHVNCFIEQSPSTQLEKLSGWESLSVSDQASVTSLAKKVPSTGENDHKQQQSATKPTTKRRKDEEIAKSKFGKVEGDVSVSRVVSGNNARDMGDPNPQLADLEQKLEAQTKALWDLKDDLKKHVQVAELREILEMNGQDSTGSELDLRDRCADGMVFGALASCPICSGSLRYSGGRYGCHAYQSAWSKCSYLTREPERIKGRWKVPENTTNEYLLKWFKSQKGVKPVRILPPQFSSCSYRTLATDSRSQILKNESLAELKDEWKRKIEEEGGVVHSKIKKDTNCLVVNEAQGSSDSEKMKAKRMKIPVVREEYLVECFKRKQKLPFDFYKIESISETSSMVTTIKVKGRSAVHENSGMQETGHVLEDGKSIYNTTLNMSDLSTGINSYYILQIIQDDRSSDCFVFRKWGRVGNEKIGGNKIEEFSKSDAIREFKRLFLEKTGNSWEAWEKKQNFQKQPGRFFPLDIDYGVNKQMQKKNGKVTESKLPPSLAQLMKMLFNVETYRAAMMEFEINLAEMPLGKLSKNNIQKGFEALTEIQNLLNSNIHEPSIKESLIIDASNQFFTVIPSIHPHIIRDENDFKSKVKMLEALQDIEIASRLVGFDVDNDDSLDEKYKKLQCDITPIPHDSEDYELIEKYLLTTHAPTHTEWSLELEEVFTLDREGELDKFAPYREKLKNRMLLWHGSRLTNFIGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCYTNKSNPVGLMLLSEVALGEVYELKNAQYMEKPPAGKHSTKGLGKKIPAESEHVKWKDNIVVPCGKPVASKVRASELMYNEYVVYETAQFPAVSCSVLVNTKLGSPSMASSAGSPCGACKFLRRKCAADCIFAPHFCSEQGPARFAAIHKVFGASNVAKLLLHVPVPDRCEAVVTISYEAQARIRDPVYGCVSHIFALQQQVACLQAQLAQAKAQLAQKLNDPHKVENQWTLNDYVNGVSNFPTYPSCLANPISPQSSVESMDHSSEAMNLQEIQSRSAEEFQFQSFRKKRPCNSDELQALAFRMMRS 1180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30084584 30095679 + BLOR18959 Blo07g01027 63551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01027 1180 Coils Coil 242 262 - -
Blo07g01027 1180 MobiDBLite consensus disorder prediction 199 214 - -
Blo07g01027 1180 SUPERFAMILY BRCT domain 401 474 IPR036420 -
Blo07g01027 1180 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 100 191 - -
Blo07g01027 1180 Gene3D BRCT domain 392 486 IPR036420 -
Blo07g01027 1180 Gene3D - 233 301 - -
Blo07g01027 1180 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 103 183 IPR001510 GO:0003677|GO:0008270
Blo07g01027 1180 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 626 760 IPR036616 GO:0003950
Blo07g01027 1180 Pfam Lateral organ boundaries (LOB) domain 987 1085 IPR004883 -
Blo07g01027 1180 Gene3D - 761 965 - -
Blo07g01027 1180 SMART PADR1_2 290 343 IPR012982 -
Blo07g01027 1180 Gene3D - 302 363 IPR038650 -
Blo07g01027 1180 Gene3D - 617 760 IPR036616 GO:0003950
Blo07g01027 1180 Pfam Poly(ADP-ribose) polymerase catalytic domain 771 962 IPR012317 GO:0003950
Blo07g01027 1180 ProSiteProfiles PARP catalytic domain profile. 751 982 IPR012317 GO:0003950
Blo07g01027 1180 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 8 91 IPR001510 GO:0003677|GO:0008270
Blo07g01027 1180 Gene3D - 99 194 IPR036957 GO:0003677|GO:0008270
Blo07g01027 1180 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 92 - -
Blo07g01027 1180 SMART WGR_cls 515 598 IPR008893 -
Blo07g01027 1180 Pfam BRCA1 C Terminus (BRCT) domain 402 461 IPR001357 -
Blo07g01027 1180 CDD WGR_PARP1_like 505 611 - -
Blo07g01027 1180 SMART zf_PARP_3 11 88 IPR001510 GO:0003677|GO:0008270
Blo07g01027 1180 SMART zf_PARP_3 106 180 IPR001510 GO:0003677|GO:0008270
Blo07g01027 1180 PANTHER DNA LIGASE 48 961 - -
Blo07g01027 1180 ProSiteProfiles LOB domain profile. 986 1088 IPR004883 -
Blo07g01027 1180 PANTHER POLY [ADP-RIBOSE] POLYMERASE 1 48 961 - -
Blo07g01027 1180 MobiDBLite consensus disorder prediction 178 195 - -
Blo07g01027 1180 Gene3D - 2 98 IPR036957 GO:0003677|GO:0008270
Blo07g01027 1180 CDD parp_like 626 962 - -
Blo07g01027 1180 ProSiteProfiles WGR domain profile. 504 604 IPR008893 -
Blo07g01027 1180 ProSiteProfiles PARP alpha-helical domain profile. 626 744 IPR004102 GO:0003950
Blo07g01027 1180 Pfam WGR domain 515 594 IPR008893 -
Blo07g01027 1180 SUPERFAMILY ADP-ribosylation 760 962 - -
Blo07g01027 1180 Pfam PADR1 (NUC008) domain 292 341 IPR012982 -
Blo07g01027 1180 MobiDBLite consensus disorder prediction 178 214 - -
Blo07g01027 1180 Coils Coil 1067 1094 - -
Blo07g01027 1180 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 106 177 IPR001510 GO:0003677|GO:0008270
Blo07g01027 1180 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 11 87 IPR001510 GO:0003677|GO:0008270
Blo07g01027 1180 SMART BRCT_7 391 464 IPR001357 -
Blo07g01027 1180 Pfam Poly(ADP-ribose) polymerase, regulatory domain 627 757 IPR004102 GO:0003950
Blo07g01027 1180 SUPERFAMILY WGR domain-like 482 609 IPR036930 -
Blo07g01027 1180 ProSiteProfiles BRCT domain profile. 389 474 IPR001357 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00299 Blo07g01027 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00299 Blo-Chr5:3360435 Blo07g01027 Blo-Chr7:30084584 7.31E-101 dispersed
Blo07g01027 Blo-Chr7:30084584 Blo10g00076 Blo-Chr10:729405 2.00E-63 dispersed
Blo10g00649 Blo-Chr10:20319321 Blo07g01027 Blo-Chr7:30084584 2.58E-74 transposed
Blo14g00228 Blo-Chr14:2011430 Blo07g01027 Blo-Chr7:30084584 6.25E-109 transposed
Blo19g00024 Blo-Chr19:347024 Blo07g01027 Blo-Chr7:30084584 4.70E-06 transposed
Blo10g00648 Blo-Chr10:20312376 Blo07g01027 Blo-Chr7:30084584 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12656 PF00644 PARP 5.70E-68 CL0084 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01027 K24070 - qsu:111987540 1463.74