Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01031 ATGGATTTCGAATTCCCACCTGAATCCCTGTTCGGCTTGCCGGAATCGTTTTCCTGGAAAGAGCTCTTCGATCACCAAACCTCTCTCCCGTTCAACCTGAATGACTCGGAGGAAATGCTACTGTTCGAAGCAGTTGCAGAGGGAATAAATCTGGAAGTTTCAGAGAAGAGCTCTTTCGGAGCGATTAAGGAGGAAGAAGTGAGCTCCTGTAATGACCAAGTGCAGCCAGTGAAGGAGAAGTCCTACAGAGGGGTGAGAAGGCGGCCGTGGGGAAAGTACGCCGCGGAAATCAGGGATTCCACCAGGCATGGGATAAGGGTCTGGCTGGGGACTTTCGACAGCGCCGAGGCAGCCGCTCTGGCCTACGATCAAGCGGCATTTTCGATGAGAGGGTCAATGGCAGTTCTTAATTTTCCGGTGGAAATAGTTAGACAGTCTCTTCAGGAAATCAAGTTCGGATTTGAAGAAGGGTGTTCCCCTGTTATGGCTCTCAAGAGGAAGCACTCCATGAGAAGAAGGGCGTTTCCAAACAAAAGCAAAGGAGTAGAGAAAAGAAAGAAGAATGTAGTGGTTTTGGAGGATCTTGGGGCTGAATATTTGGACCAACTTTTGAGTTTAAGCTCTTCTCAAAGCCCAAATCCTTGGTGA 648 48.92 MDFEFPPESLFGLPESFSWKELFDHQTSLPFNLNDSEEMLLFEAVAEGINLEVSEKSSFGAIKEEEVSSCNDQVQPVKEKSYRGVRRRPWGKYAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSMAVLNFPVEIVRQSLQEIKFGFEEGCSPVMALKRKHSMRRRAFPNKSKGVEKRKKNVVVLEDLGAEYLDQLLSLSSSQSPNPW 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30140539 30141186 + BLOR18963 Blo07g01031 63555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01031 215 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Blo07g01031 215 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Blo07g01031 215 Gene3D AP2/ERF domain 80 141 IPR036955 GO:0003700|GO:0006355
Blo07g01031 215 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
Blo07g01031 215 PANTHER DNA-BINDING DOMAIN 21 206 IPR044808 GO:0003700|GO:0009873
Blo07g01031 215 CDD AP2 80 140 IPR001471 GO:0003700|GO:0006355
Blo07g01031 215 SMART rav1_2 81 145 IPR001471 GO:0003700|GO:0006355
Blo07g01031 215 SUPERFAMILY DNA-binding domain 81 141 IPR016177 GO:0003677
Blo07g01031 215 ProSiteProfiles AP2/ERF domain profile. 81 139 IPR001471 GO:0003700|GO:0006355
Blo07g01031 215 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 21 206 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g00405 Blo07g01031 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00736 Blo-Chr2:23863779 Blo07g01031 Blo-Chr7:30140539 3.04E-61 dispersed
Blo07g00494 Blo-Chr7:11623085 Blo07g01031 Blo-Chr7:30140539 2.64E-28 dispersed
Blo07g01031 Blo-Chr7:30140539 Blo11g00448 Blo-Chr11:3962976 3.23E-62 dispersed
Blo06g00405 Blo-Chr6:23378165 Blo07g01031 Blo-Chr7:30140539 5.02E-59 transposed
Blo10g00644 Blo-Chr10:20106488 Blo07g01031 Blo-Chr7:30140539 4.76E-103 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12657 PF00847 AP2 8.10E-15 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01031 K14516 - jre:108994448 259.996