Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01064 ATGGCGGTTTCTCTGAGATCATTCTCTGCTTGTTCGTTGTTGCTTCTTCTTATCCAACTTCTGCTGAACTTCAAATTTGCTCAGTCAAGGTGGATTGAAGGTCTAAATGAGCACGCAGTTAAAGATCCAGAGGAGGTTGCATCCATGGTTAACATGCGGATCCGCAACAGCACGGAGAGGAGAAACCTGGGATTCTTTTCGTGCGGAACGGGAAATCCGATTGATGACTGTTGGCGGTGTGACACACGTTGGCAGATGCGCCGAAAGCGCCTGGCCGACTGTGGCATTGGGTTTGGACGCAATGCCGTCGGAGGTCGAGATGGTCGATTCTACGTAGTCTCTGATCCTGGAGACGATGACCCTGTCAGTCCAAGACCCGGCACCCTTCGCCACGCTGTCATTCAGGATGAACCACTGTGGATCGTCTTCAAGCGAGACATGGTGATCACTTTAAAGCAAGAGCTTATTATGAACAGCTTTAAGACGATTGATGGTCGAGGAGTAAACGTTCATATTGCTAATGGGGCTTGCATTACGATTCAATTCATTACCAACGTAATTATCCACGGCCTCCACATTCACGACTGCAAGCCGACCGGAAATGCGATGGTTAGAAGCTCACCCAGCCACTACGGGTGGAGGACTATGGCCGATGGGGATGGCATTTCCATTTTCGCATCGAGTCATATTTGGATCGACCACAACTCTCTTTCTAATTGCGCAGATGGCCTAGTCGATGCTGTCATGGGTTCCACCGCCATTACCATCTCCAACAACTACTTCACTCATCACAACGAGGTAATTCTACTGGGTCACAGTGACTCGTACACAAACGACAAACAAATGCAAGTGACAATCGCCTACAATCATTTTGGAGAGGGTCTTATCCAAAGAATGCCAAGGTGTAGGCATGGATATTTTCATGTGGTAAACAATGACTACACCCACTGGGAAATGTATGCCATTGGCGGAAGTGCTGATCCCACAATTAACAGCCAGGGAAACAGATACTTAGCCCCTGCAAACCCTTTCGCAAAAGAGGTTACTAAGCGGGTTGATACAAACTCATACGAGTGGAAACACTGGAACTGGAGATCAGAAGGAGACCTGTTGCTAAACGGAGCCTACTTCGTCCCATCAGGAGGTGGTGCCGGAGCAAGTTATGCAAGAGCATCCAGCTTGGGAGCCAAGTCTTCCTCCTTGGTCGCCTCCATTACCTCCGGTGCAGGCGCTCTTTCATGCCGCCGTGGTTCCCAGTGCTAA 1263 49.41 MAVSLRSFSACSLLLLLIQLLLNFKFAQSRWIEGLNEHAVKDPEEVASMVNMRIRNSTERRNLGFFSCGTGNPIDDCWRCDTRWQMRRKRLADCGIGFGRNAVGGRDGRFYVVSDPGDDDPVSPRPGTLRHAVIQDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFASSHIWIDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVILLGHSDSYTNDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYLAPANPFAKEVTKRVDTNSYEWKHWNWRSEGDLLLNGAYFVPSGGGAGASYARASSLGAKSSSLVASITSGAGALSCRRGSQC 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30485130 30488898 - BLOR18996 Blo07g01064 63588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01064 420 SUPERFAMILY Pectin lyase-like 48 415 IPR011050 -
Blo07g01064 420 PANTHER PECTATE LYASE 27 417 - -
Blo07g01064 420 Gene3D - 71 413 IPR012334 -
Blo07g01064 420 PRINTS Pollen allergen Amb family signature 298 317 IPR018082 -
Blo07g01064 420 PRINTS Pollen allergen Amb family signature 362 386 IPR018082 -
Blo07g01064 420 PRINTS Pollen allergen Amb family signature 320 339 IPR018082 -
Blo07g01064 420 PRINTS Pollen allergen Amb family signature 118 143 IPR018082 -
Blo07g01064 420 PRINTS Pollen allergen Amb family signature 218 239 IPR018082 -
Blo07g01064 420 PRINTS Pollen allergen Amb family signature 94 111 IPR018082 -
Blo07g01064 420 PRINTS Pollen allergen Amb family signature 154 170 IPR018082 -
Blo07g01064 420 PRINTS Pollen allergen Amb family signature 391 414 IPR018082 -
Blo07g01064 420 PANTHER PECTATE LYASE 18-RELATED 27 417 IPR045032 GO:0030570
Blo07g01064 420 SMART amb_all 146 343 IPR002022 -
Blo07g01064 420 Pfam Pectate lyase 154 335 IPR002022 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00696 Blo-Chr2:21029835 Blo07g01064 Blo-Chr7:30485130 0 dispersed
Blo07g01064 Blo-Chr7:30485130 Blo12g00125 Blo-Chr12:8720829 0 dispersed
Blo01g00317 Blo-Chr1:3884213 Blo07g01064 Blo-Chr7:30485130 0 wgd
Blo10g00608 Blo-Chr10:18580162 Blo07g01064 Blo-Chr7:30485130 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01064 K01728 - nnu:104587909 741.88