Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01073 ATGGGTGGTGAAGCTGGCAAGGTATACAGTTTGGGTGAGGTAGCAGCCCACAACTCTAAAAACGACTGCTGGATTCTCATCGACGGCAAGGTGTACGATGTGACAAAGTTTTTGGACGATCATCCGGGCGGGGACGAGGTACTGTTGTTAGCCACAGGGAAGGACGCAAGTGACGACTTTGCGGATGTGGGTCACGGAAGCACAGCCTATGCGATGATGGCTGATTACTATGTCGGAGACATGGACCTATCGTCCATTCCGGCAAAGGTTAAGAGCAGCCCATCGGCCTTGCCGCCGCACGAGGAGCAGGGCCCAGGCGAAAGGCAGCATTTCAGTTGGCAGCTCCTCCAATATCTACTTCCTCTCATGCTCTTGGGATTGGCTTTGGGAGTTGGCTCCTATACCAAGAGTAGAGAATAA 420 53.1 MGGEAGKVYSLGEVAAHNSKNDCWILIDGKVYDVTKFLDDHPGGDEVLLLATGKDASDDFADVGHGSTAYAMMADYYVGDMDLSSIPAKVKSSPSALPPHEEQGPGERQHFSWQLLQYLLPLMLLGLALGVGSYTKSRE 139
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30552710 30553880 - BLOR19005 Blo07g01073 63597

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01073 139 PANTHER CYTOCHROME B5 ISOFORM B 5 135 - -
Blo07g01073 139 PANTHER CYTOCHROME B5 5 135 - -
Blo07g01073 139 PRINTS Cytochrome B5 signature 56 63 IPR001199 -
Blo07g01073 139 PRINTS Cytochrome B5 signature 31 41 IPR001199 -
Blo07g01073 139 PRINTS Cytochrome B5 signature 41 55 IPR001199 -
Blo07g01073 139 PRINTS Cytochrome B5 signature 69 81 IPR001199 -
Blo07g01073 139 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 37 44 IPR018506 GO:0020037
Blo07g01073 139 Pfam Cytochrome b5-like Heme/Steroid binding domain 12 81 IPR001199 -
Blo07g01073 139 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 7 88 IPR036400 -
Blo07g01073 139 Gene3D - 3 84 IPR036400 -
Blo07g01073 139 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 6 82 IPR001199 -
Blo07g01073 139 SMART Cyt_b5_2 9 82 IPR001199 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01073 K23490 CYB5; cytochrome b5 - cit:102616688 157.532
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01073 Blo-Chr7:30552710 Blo09g00007 Blo-Chr9:61155 4.90E-46 dispersed
Blo07g01073 Blo-Chr7:30552710 Blo16g00687 Blo-Chr16:26502338 1.29E-50 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo09g00007 . 31 164 NADPH P450 reductases AT5G53560 81.3 2.7e-61 231.5
Blo16g00687 . 1 134 NADPH P450 reductases AT5G53560 69.4 6.0e-53 203.8
Blo02g00229 . 16 121 NADPH P450 reductases AT5G53560 69.8 7.6e-40 160.2
Blo16g00687 . 1 134 NADPH P450 reductases AT5G48810 66.9 2.6e-51 198.4
Blo09g00007 . 31 164 NADPH P450 reductases AT5G48810 62.5 1.8e-47 185.7
Blo07g01073 . 1 138 NADPH P450 reductases AT5G48810 56.7 7.9e-40 160.2
Blo16g00687 . 22 133 NADPH P450 reductases AT2G32720 83.0 3.6e-50 194.5
Blo02g00229 . 16 120 NADPH P450 reductases AT2G32720 84.8 1.7e-47 185.7
Blo09g00007 . 52 163 NADPH P450 reductases AT2G32720 67.9 9.0e-41 163.3
Blo07g01200 . 399 723 NADPH P450 reductases AT5G17770 68.9 1.4e-123 439.5
Blo08g00150 . 8 278 NADPH P450 reductases AT5G17770 76.0 1.8e-120 429.1
Blo09g00346 . 2 251 NADPH P450 reductases AT5G17770 80.0 2.3e-115 412.1
Blo09g00007 . 31 164 NADPH P450 reductases AT5G53560 81.3 2.7e-61 231.5
Blo16g00687 . 1 134 NADPH P450 reductases AT5G53560 69.4 6.0e-53 203.8
Blo02g00229 . 16 121 NADPH P450 reductases AT5G53560 69.8 7.6e-40 160.2
Blo16g00687 . 1 134 NADPH P450 reductases AT5G48810 66.9 2.6e-51 198.4
Blo09g00007 . 31 164 NADPH P450 reductases AT5G48810 62.5 1.8e-47 185.7
Blo07g01073 . 1 138 NADPH P450 reductases AT5G48810 56.7 7.9e-40 160.2
Blo16g00687 . 22 133 NADPH P450 reductases AT2G32720 83.0 3.6e-50 194.5
Blo02g00229 . 16 120 NADPH P450 reductases AT2G32720 84.8 1.7e-47 185.7
Blo09g00007 . 52 163 NADPH P450 reductases AT2G32720 67.9 9.0e-41 163.3
Blo07g01200 . 399 723 NADPH P450 reductases AT5G17770 68.9 1.4e-123 439.5
Blo08g00150 . 8 278 NADPH P450 reductases AT5G17770 76.0 1.8e-120 429.1
Blo09g00346 . 2 251 NADPH P450 reductases AT5G17770 80.0 2.3e-115 412.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0021203 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3