Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01108 ATGGAGGGAGATAGCAGCGAAGGAAAAGAGGGCAAGAAGCGTCTTCCTTTGGCAGAGGTTGTGGCCAATTGCATCAAAAGGTGGTTCAAGGATGCGCTGAAGGAGGCTAAAGGAGGGGATATCAACATGCAGGTCTTGGTTGGTCAGATGTACCACAGTGGTTATGGAGTTTCTTGTTATGGTGGTGTACTCAAACAGCCTAGGGAAGATATTGGATTACAAAAGCATCAAGGACTCGATCTTCAGCATGGGGAGTTTGTGATAAACATCCAGGTTACAATGCCAGTGATTCCGACTCTGATGACACGAAGGTTGATTCTTGAAAATATCAGACCGCCCGGTTTTGAACCTCTCTCCCCTTTTCTTTCCTATCTCCTCTGGTTTCACCCTAACTGCGCCCACAAAATGGAAGAGATGTTCTTCTCGAGCGTTAAGAGGCAAAGATCGGTCGATATCTCTAACTCTTTCGATCTGCTCTCTGATGAAATTATTTTTACAATCCTTGATGTTCTGAACCCAAATCCGTCTGACAAGAAGTCCTTCTCCTTAGTCTGTAAGTCGTTCTACGCCATCGAATCGAAGCACCGCAAATCTCTGAAACCCCTTCGACCGGAGCACCTCCCCTCAATTCTTAAGCGATACCCAAATGTGACTGATATCGATCTTTCCCTCTGCCGTAGAATCACAAACAATGACATGAACATTATTTCAGATTCTTGCAACTCCTCGCTCCTCCGTATCAACCTTTCGAGGTCTGGGTTCTTTTCAGGCTCTGGGATGCTGAGTTTGGCTTTCAATTGTAAGAACTTGGTGGAGATTAACTTGTCCAACTCCACAGAGCTGAGAGACTCGGCAGCGACTGCAATTAGGGAGGCAAAGAATTTGGAGAAGTTGTGGTTAGCGAGGTGTAAATTGGTTACGGATGTGGGAATCACGTGTATCGCGGTTGGGTGTAGAAAGTTGAGGCTGATTAGCTTAAAGTGGTGTTTGGGTGTTGGAGATCGAGGGGTGGGTTCGATTGCTTTCAATTGTCAAGAAATTCGTAGCCTCGATCTCTCATACTTGCCGATTACAGATAAATGTTTGCCATCTATATTGAAACTGAAGTATCTCGACGATCTGTCGCTCGAGGGATGCTATGGCATCGACGATCAAAGACTGTCCCTCCTCGAAGTTGGATGCCGGTCCCCAAAGAAACTTGATATGTCAAGTTGTCGGAACATTACTCATGTTGGTCTGTCTTTCCTTACAAGTGGTATCGAATATGTTGAGCAGCTTTCTCTAGCATATGGCTCTAATGTGACTCTTGCTCTTGCCAACAGATTGGGGCAGCTCTCCAAGTTACAATCAGTCAAGTTAGATGGCTGCTTGGTTACTTCTGCCGGGTTAAAAGCAATTGGAAATCAGTGTATATCGCTGAAAGAGCTCAGCTTAAGTAAATGCTCAGGAGTTTCAGACGAAGGTCTCTCCTTGCTTGTGTCGAAGCACAAGGACTTGAGGAAGCTTGACCTCACTTGTTGTCGAACGATAACCGCTGTTTCGGTTGCTCAAATTGCAAATTCATGCACTTCATTAACTTCTCTTCGGATGGAATCTTGTTTACTTGTATCCGCCGAAGCATTTATCTCAATCGGACGGCGATGCCATGCTCTCGAGGAGCTTGATCTGACCGAAAATGAAATTACCGATGAAGCTCTAAAATCCATTTCAGAGTGTGCAAAACTCTCCATCCTAAAGCTCGGAATTTGCCTCGACATTAGTGACGAGGGGCTTGACCGCATTGGCAGATGCTGCTCAAAGCTTGTGGAGCTGGATTTGTACAGGTCGGACGGAATAACAGATTCTAGCCTTATATCGATTGCCCATGGTTGTCCTCGACTCGAAATGATAAATATTGCCTACTGTAAAAACATTACCGATCCCTCCTTTTCAGCTCTGTCAAAATGCTCGAAATTACACACGATCGAAGCTCGAGGATGTCCTCTTATCACATCGTTGGGTTTAGCAGATATCAGTGTTGGATGCAAGCAACTCACCAAGCTAGATGTGAAAAGTTGTAACCGAATTGACGATGCCGGAATGATCGGGATTGCCCAATTTTCGCAAAATCTCAGACAGATAAATTTGTCATATACCTCAGTTACAGAAGTAGGACTCCTGTCTCTTGCCAATCTTAGCTGCCTACAGAATCTCACTATCTTGCACTCAAAAGGGTTGACTCCGAGCGGATTATCCGCTTGCTTACTGTCCTGTGGAGGATTGATGAGAGCGAAGCTGCATATATCATTTAAATCCCGTCTTCCCCGACCTCTTCTTGATTATTTAGAAGCAAGGGGTTGTGTTATTCAATGGCGAGATAAAATGTTCAAAGCTGAGGTAGACCCAAAGTTTTGGAAGCTGAGGTTGGAAGACATGGCGGCCATATCTTGA 2430 45.06 MEGDSSEGKEGKKRLPLAEVVANCIKRWFKDALKEAKGGDINMQVLVGQMYHSGYGVSCYGGVLKQPREDIGLQKHQGLDLQHGEFVINIQVTMPVIPTLMTRRLILENIRPPGFEPLSPFLSYLLWFHPNCAHKMEEMFFSSVKRQRSVDISNSFDLLSDEIIFTILDVLNPNPSDKKSFSLVCKSFYAIESKHRKSLKPLRPEHLPSILKRYPNVTDIDLSLCRRITNNDMNIISDSCNSSLLRINLSRSGFFSGSGMLSLAFNCKNLVEINLSNSTELRDSAATAIREAKNLEKLWLARCKLVTDVGITCIAVGCRKLRLISLKWCLGVGDRGVGSIAFNCQEIRSLDLSYLPITDKCLPSILKLKYLDDLSLEGCYGIDDQRLSLLEVGCRSPKKLDMSSCRNITHVGLSFLTSGIEYVEQLSLAYGSNVTLALANRLGQLSKLQSVKLDGCLVTSAGLKAIGNQCISLKELSLSKCSGVSDEGLSLLVSKHKDLRKLDLTCCRTITAVSVAQIANSCTSLTSLRMESCLLVSAEAFISIGRRCHALEELDLTENEITDEALKSISECAKLSILKLGICLDISDEGLDRIGRCCSKLVELDLYRSDGITDSSLISIAHGCPRLEMINIAYCKNITDPSFSALSKCSKLHTIEARGCPLITSLGLADISVGCKQLTKLDVKSCNRIDDAGMIGIAQFSQNLRQINLSYTSVTEVGLLSLANLSCLQNLTILHSKGLTPSGLSACLLSCGGLMRAKLHISFKSRLPRPLLDYLEARGCVIQWRDKMFKAEVDPKFWKLRLEDMAAIS 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30985269 30995747 + BLOR19040 Blo07g01108 63632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01108 809 PANTHER F-BOX/LRR-REPEAT PROTEIN 3 152 750 - -
Blo07g01108 809 Coils Coil 808 809 - -
Blo07g01108 809 SUPERFAMILY RNI-like 586 756 - -
Blo07g01108 809 SUPERFAMILY RNI-like 393 640 - -
Blo07g01108 809 Pfam Leucine Rich repeat 470 492 IPR001611 GO:0005515
Blo07g01108 809 Pfam Leucine Rich repeat 548 570 IPR001611 GO:0005515
Blo07g01108 809 Pfam Leucine Rich repeat 677 698 IPR001611 GO:0005515
Blo07g01108 809 Gene3D Ribonuclease Inhibitor 366 541 IPR032675 -
Blo07g01108 809 Gene3D Ribonuclease Inhibitor 151 345 IPR032675 -
Blo07g01108 809 Gene3D Ribonuclease Inhibitor 542 783 IPR032675 -
Blo07g01108 809 PANTHER UNCHARACTERIZED 152 750 - -
Blo07g01108 809 SUPERFAMILY RNI-like 207 426 - -
Blo07g01108 809 SMART LRR_CC_2 548 572 IPR006553 -
Blo07g01108 809 SMART LRR_CC_2 318 343 IPR006553 -
Blo07g01108 809 SMART LRR_CC_2 624 649 IPR006553 -
Blo07g01108 809 SMART LRR_CC_2 241 266 IPR006553 -
Blo07g01108 809 SMART LRR_CC_2 650 674 IPR006553 -
Blo07g01108 809 SMART LRR_CC_2 292 317 IPR006553 -
Blo07g01108 809 SMART LRR_CC_2 214 239 IPR006553 -
Blo07g01108 809 SMART LRR_CC_2 701 725 IPR006553 -
Blo07g01108 809 SMART LRR_CC_2 522 547 IPR006553 -
Blo07g01108 809 SMART LRR_CC_2 496 521 IPR006553 -
Blo07g01108 809 SMART LRR_CC_2 470 495 IPR006553 -
Blo07g01108 809 SMART LRR_CC_2 344 368 IPR006553 -
Blo07g01108 809 SMART LRR_CC_2 675 700 IPR006553 -
Blo07g01108 809 SMART LRR_CC_2 598 623 IPR006553 -
Blo07g01108 809 SMART LRR_CC_2 394 419 IPR006553 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g01108 Blo09g00290 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01108 Blo-Chr7:30985269 Blo12g01077 Blo-Chr12:28486689 1.97E-11 dispersed
Blo17g00273 Blo-Chr17:2875946 Blo07g01108 Blo-Chr7:30985269 6.55E-11 dispersed
Blo05g00145 Blo-Chr5:1329374 Blo07g01108 Blo-Chr7:30985269 2.83E-08 transposed
Blo05g00149 Blo-Chr5:1365589 Blo07g01108 Blo-Chr7:30985269 6.19E-10 transposed
Blo05g00151 Blo-Chr5:1383129 Blo07g01108 Blo-Chr7:30985269 2.13E-11 transposed
Blo05g00385 Blo-Chr5:4718247 Blo07g01108 Blo-Chr7:30985269 7.95E-06 transposed
Blo07g00485 Blo-Chr7:11120874 Blo07g01108 Blo-Chr7:30985269 1.35E-06 transposed
Blo09g00291 Blo-Chr9:12402027 Blo07g01108 Blo-Chr7:30985269 1.28E-24 transposed
Blo09g00511 Blo-Chr9:16271783 Blo07g01108 Blo-Chr7:30985269 1.19E-09 transposed
Blo11g00028 Blo-Chr11:239365 Blo07g01108 Blo-Chr7:30985269 5.43E-06 transposed
Blo11g00652 Blo-Chr11:6835408 Blo07g01108 Blo-Chr7:30985269 1.32E-08 transposed
Blo12g00553 Blo-Chr12:23544493 Blo07g01108 Blo-Chr7:30985269 1.81E-06 transposed
Blo07g01108 Blo-Chr7:30985269 Blo09g00290 Blo-Chr9:12361948 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01108 K10268 - rcu:8278933 923.309