Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01109 ATGAACCAGAAACCTACTGGAGTCTGTTGGGGATCTTCTGCCATTAAAACTAACAAATATGCAGAAGAAATTCCAAAGACGAAGACTTTACCTCTTCCTCTCTCTCCTCCACCAGATTCTCCTTCTACTTACTTACTTCTCCCAAATGGTTCCACCTCCAATGAAGTCCCCTATTCCCCTGTTTTTCTCACCTCCCCTGATATTTTTCCATCTCCAACAACTGGGTTTTTTCCTGGATCGGATTTCGATTGGAAGAGTAATAATCAGCAGCAATTCAGTGGGAAAATGGAAACTTTCTCTGACTTTTCATTCCAACCACAAGGGCGTGATTCAGCTTCGTCTTCATCGTCCTCCTTCTTTCAGCCTCACTCAACAATGGTTTCAGCGCAACAATCATGGAACTCCGGCCAACCCACAAACAAAGTCAATGTCTTCTCCGACAAAATGAAAATAAAATCAGAAAATTTCCCTTCAGAAGCAAACCTGCCTCAGACGAATTTGCAGTCCGGTCAAAACCATCAAACTCAACAACTAAAGTACGCGAGGCCGCATCGGAGTTCAGACGATGGATACAACTGGAGAAAATATGGGCAAAAGCAGGTGAAAGGAAGCGAAAACCCTCGCAGTTACTACAAATGCACGTATCCGAATTGCCCAACGAAGAAGAAAGTGGAAAGGTCTTTAGAGGGTCAGATCACTGAGATCGTTTACAAGGGAAGCCATAGCCATCCAAAGCCAACTAGGCAGTTGTCTTCCCAGTTATTCCAATCTTGTTCTACCACCAACTCTGTGACGTTGCAAGAGGACTCTTCTGCCTCAGCCGGAGAGGAAGAATTCGAATCGAATTATCCGATAAGTAATTCTGCAGGAGATGATGAAATCGAGCCCGAAGCTAAAAGATGGAGAGGAGATGATCAAAACGAGGCTGTTTGTAGTTCATCTTCTTCTGGAAATAGAACTGTTAGAGAGCCGAGAGTGGTGGTTCAAACAAGAAGTGAAATTGATGTTCTTGACGATGGGTATAGATGGAGGAAATATGGACAAAAAGTAGTCAAGGGAAACCCAAATCCCAGGTACTACAAATGCACATCCGCCGGTTGTCCGGTGAGGAAACACGTAGAGCGATCAGCCAACGACGCGATAGCTGTGATCACCACCTACGAGAGCAAGCACAACCACGACGTTCCGGCAGCTCGAGGCAGCGGTGGCTACGCTCTCAACAGACCTCCACCGCCGGGGGCCGTGCCTGTGAGGCCTTCCGCTCTGTCCATCCATTCTAACCACTGGTCTTACACAATCACACCCCAACCATTGCCGTCTGAAATCCTGCAGCCCGGAGAGTTTGGATTGTTGGGGTATGGATCAATACCCAGTAACTCTCATATGGGTCACGATCCATCAATGGTGTATTCTCAGCCATTTTTGCCCAGAGCCAAGGACGAACCCAAGGATGATATGGATTTTCTCGACTCGTTTCTTTCCTAG 1485 46.6 MNQKPTGVCWGSSAIKTNKYAEEIPKTKTLPLPLSPPPDSPSTYLLLPNGSTSNEVPYSPVFLTSPDIFPSPTTGFFPGSDFDWKSNNQQQFSGKMETFSDFSFQPQGRDSASSSSSSFFQPHSTMVSAQQSWNSGQPTNKVNVFSDKMKIKSENFPSEANLPQTNLQSGQNHQTQQLKYARPHRSSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLEGQITEIVYKGSHSHPKPTRQLSSQLFQSCSTTNSVTLQEDSSASAGEEEFESNYPISNSAGDDEIEPEAKRWRGDDQNEAVCSSSSSGNRTVREPRVVVQTRSEIDVLDDGYRWRKYGQKVVKGNPNPRYYKCTSAGCPVRKHVERSANDAIAVITTYESKHNHDVPAARGSGGYALNRPPPPGAVPVRPSALSIHSNHWSYTITPQPLPSEILQPGEFGLLGYGSIPSNSHMGHDPSMVYSQPFLPRAKDEPKDDMDFLDSFLS 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30996380 30998242 + BLOR19041 Blo07g01109 63633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01109 494 MobiDBLite consensus disorder prediction 95 120 - -
Blo07g01109 494 Pfam WRKY DNA -binding domain 338 393 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo07g01109 494 Pfam WRKY DNA -binding domain 188 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo07g01109 494 SMART WRKY_cls 337 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo07g01109 494 SMART WRKY_cls 187 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo07g01109 494 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 428 IPR044810 GO:0003700
Blo07g01109 494 MobiDBLite consensus disorder prediction 464 494 - -
Blo07g01109 494 MobiDBLite consensus disorder prediction 158 181 - -
Blo07g01109 494 MobiDBLite consensus disorder prediction 292 306 - -
Blo07g01109 494 ProSiteProfiles WRKY domain profile. 332 396 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo07g01109 494 Gene3D WRKY domain 322 397 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo07g01109 494 Gene3D WRKY domain 172 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo07g01109 494 ProSiteProfiles WRKY domain profile. 188 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo07g01109 494 SUPERFAMILY WRKY DNA-binding domain 329 396 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo07g01109 494 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 24 428 - -
Blo07g01109 494 MobiDBLite consensus disorder prediction 307 325 - -
Blo07g01109 494 MobiDBLite consensus disorder prediction 158 192 - -
Blo07g01109 494 MobiDBLite consensus disorder prediction 28 48 - -
Blo07g01109 494 MobiDBLite consensus disorder prediction 266 288 - -
Blo07g01109 494 MobiDBLite consensus disorder prediction 266 325 - -
Blo07g01109 494 SUPERFAMILY WRKY DNA-binding domain 183 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00034 Blo-Chr7:592191 Blo07g01109 Blo-Chr7:30996380 3.91E-12 dispersed
Blo07g01109 Blo-Chr7:30996380 Blo13g01025 Blo-Chr13:32591734 1.87E-116 dispersed
Blo07g01109 Blo-Chr7:30996380 Blo09g00290 Blo-Chr9:12361948 1.26E-171 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12665 PF03106 WRKY 5.30E-25 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01109 K13424 - tcc:108662306 451.825