Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01119 ATGTCAACACCATCAGATCAGATAGTTACTGCAACTCCAATTTGGCTCAACAATGGCGACAACGCGTGGCAATTGACGTCCGCTACGCTTGTTGGTCTGCAAAGCATGCCGGGTCTGGTGATTCTCTACGGCAGCATCGTGAAGAAGAAATGGGCGGTGAACTCGGCTTTCATGGCCCTCTATGCCTTCGCCGCAACCCTCATATGCTGGGTTCTCGTCGGCTACCGTATGGCCTTTGGGGACGAATTGCTTCCACTCTGGGGCAAAGGGGCGCCTGCTCTCGGCCAACACTACCTCACGAACCGAGCCCAAATCCCGGAGAGCACACAATATCGAGAAGATGGATCGATTGAGGCTCCGAAGATCGAGCCCTTTTATCCAATGGCGTCGCTCGTTTACTTCCAGTTTACATTTGCCGCAATTACGCTTGTTTTACTGGCTGGATCTGTTCTTGGGCGGATGAACATCAAAGCTTGGATGGCTTTTGTCCCTCTTTGGCTTCTTTTCTCCTACACGGTCGGAGCCTACAGTTTATGGGGCGGAGGGTTTCTCTTTCACTGGGGCGTCATCGATTATTCCGGCGGCTATGTCATCCACCTCTCCTCCGGGATCGCCGGCTTCACCGCTGCTTATTGGGTCGGTCCGAGAATAAAGAGCGATAGGGAGAGATTTCCACCCAACAACGTCTTGCTCACGCTCGCCGGGGCTGGGCTGCTTTGGATGGGCTGGTCAGGGTTCAACGGCGGTGCGCCGCGGGCAGCGAACGTTGTGGCCTCAATTGCAGTGTTGAACACAAACATAAGTGCAGCGACGAGCCTGCTTGTGTGGACCACTTTGGACGTGATTGTATTCGGAAAACCATCGGTGATCGGAGCAGTTCAGGGCATGATCACCGGCCTCGCTTGCGTCACTCCGGGAGCAGGATTAGTTCAACCATGGGCAGCCATAGTAATGGGAATCCTCGCTGGCAGCATTCCATGGGTGTCTATGATGATTCTTCACAAAAAGTCCACTCTTCTACAAAAGGTGGATGACACTCTAGGAGTATTCTACACACATGGAGTTGCAGGAATTTTAGGCGGTCTTCTAACAGGGCTCTTGGCAGAGCCATCGCTGTGCAGGCTCAGCCTCCCAGTGAGCAACACAAGAGGCGCATTTTATGGAGATGGTGGGGGAATGCTGTTTTTCAAACAATTGGTTGCGGCCATGTTTATCATAGGGTGGAACATAGTCTCCACCACAATCATACTCTTGTTTATAAGAGTTTTCATTCCGTTGAGAATGCCCGAGGAGGAGCTGATGGTCGGAGATGATGCGGTTCACGGGGAGGAGGCTTACGCTCTTTGGGGAGACGGAGAGAAATTCGACCCAAACAAACACGGGTGGAATATGGGTTCTCATGCAGAGGAATTGGCTCCTTCTCCATATGTCCATGGTGCTAGAGGTGTGACCATTGTTTTATAA 1464 52.19 MSTPSDQIVTATPIWLNNGDNAWQLTSATLVGLQSMPGLVILYGSIVKKKWAVNSAFMALYAFAATLICWVLVGYRMAFGDELLPLWGKGAPALGQHYLTNRAQIPESTQYREDGSIEAPKIEPFYPMASLVYFQFTFAAITLVLLAGSVLGRMNIKAWMAFVPLWLLFSYTVGAYSLWGGGFLFHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRIKSDRERFPPNNVLLTLAGAGLLWMGWSGFNGGAPRAANVVASIAVLNTNISAATSLLVWTTLDVIVFGKPSVIGAVQGMITGLACVTPGAGLVQPWAAIVMGILAGSIPWVSMMILHKKSTLLQKVDDTLGVFYTHGVAGILGGLLTGLLAEPSLCRLSLPVSNTRGAFYGDGGGMLFFKQLVAAMFIIGWNIVSTTIILLFIRVFIPLRMPEEELMVGDDAVHGEEAYALWGDGEKFDPNKHGWNMGSHAEELAPSPYVHGARGVTIVL 487
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 31092759 31094756 + BLOR19051 Blo07g01119 63643
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01119 487 Pfam Ammonium Transporter Family 22 446 IPR024041 GO:0008519|GO:0016020|GO:0072488
Blo07g01119 487 Gene3D Ammonium transporter AmtB like domains 1 449 IPR029020 -
Blo07g01119 487 PRINTS Rhesus blood group protein signature 230 248 IPR002229 GO:0005887
Blo07g01119 487 PRINTS Rhesus blood group protein signature 261 283 IPR002229 GO:0005887
Blo07g01119 487 PRINTS Rhesus blood group protein signature 316 334 IPR002229 GO:0005887
Blo07g01119 487 PRINTS Rhesus blood group protein signature 354 370 IPR002229 GO:0005887
Blo07g01119 487 PRINTS Rhesus blood group protein signature 135 151 IPR002229 GO:0005887
Blo07g01119 487 SUPERFAMILY Ammonium transporter 15 428 - -
Blo07g01119 487 TIGRFAM amt: ammonium transporter 20 446 IPR001905 GO:0008519|GO:0016020|GO:0072488
Blo07g01119 487 PANTHER AMMONIUM TRANSPORTER 8 484 - -
Blo07g01119 487 PANTHER AMMONIUM TRANSPORTER MEP2 8 484 IPR001905 GO:0008519|GO:0016020|GO:0072488
Blo07g01119 487 ProSitePatterns Ammonium transporters signature. 191 216 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00139 Blo-Chr7:1877222 Blo07g01119 Blo-Chr7:31092759 1.23E-178 dispersed
Blo07g00141 Blo-Chr7:1892938 Blo07g01119 Blo-Chr7:31092759 2.72E-162 dispersed
Blo07g01055 Blo-Chr7:30354247 Blo07g01119 Blo-Chr7:31092759 2.68E-18 dispersed
Blo07g01119 Blo-Chr7:31092759 Blo11g00430 Blo-Chr11:3750084 1.03E-26 dispersed
Blo07g01119 Blo-Chr7:31092759 Blo09g00283 Blo-Chr9:12124845 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01119 K03320 - zju:107405371 848.195