Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo07g01162 | TTTGGACCTGGGAAATTATCGGTTCTTGAAATGTCCCACATTGATCTGGAATCGGGCGGACATCTACGCTCGGTAACGGGAAGTGACATAAGCGTCGAGGATAGCGTCTGTTTCTCCGATGCCGATGAGGGTTCCTGCTATTCTCAGTTCTTTTCGCCGAACGGCGGCTCTTACGATGAGTACAGGTTCGCCTTCGTTTCCGAGCCCGAAGCCGGAATCGTTTTGAACTCTCAAAGAGCTTCATCGGCGTCGGATTCTTCGGTGGAGGGCGAAATTGAAATTGGGATGCCGGAGATTAAGGTGCATTTGGCTAAAGTAGAAAGAGATTGCAGAATTTGTCATTTGGGTTTGGAGAGTAATAGACGCGAGTCTGGTGTTCCGATTGAATTGGGTTGTTCTTGCAAGGATGATTTGGCTGCTGCTCATAAGCACTGTGCTGAGACCTGGTTCAAAATTAAAGGAAATAAGACCTGCGAGATTTGTCATTCTGTTGCTCGGAATGTGGCTGGAGCTCACGAGATTGAGGTGGTGGAGCAAAGCACTGAGACCGGCAATGCCTCGTTGACTGCACCAGCGCCTGCGCCTACTGCAGAGACTCAAAGCTTCTGGCGTGGACATAGGTTCCTAAATTTTCTTCTTGCTTGTATGGTTTTTGCATTTGTAATTTCATGGCTCTTCCACTTCAATGTTTCATCA | 696 | 47.99 | FGPGKLSVLEMSHIDLESGGHLRSVTGSDISVEDSVCFSDADEGSCYSQFFSPNGGSYDEYRFAFVSEPEAGIVLNSQRASSASDSSVEGEIEIGMPEIKVHLAKVERDCRICHLGLESNRRESGVPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSVARNVAGAHEIEVVEQSTETGNASLTAPAPAPTAETQSFWRGHRFLNFLLACMVFAFVISWLFHFNVSS | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 31465903 | 31467022 | + | BLOR19094 | Blo07g01162 | 63686 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo07g01162 | 232 | CDD | RING_CH-C4HC3_MARCH | 110 | 162 | - | - | |
| Blo07g01162 | 232 | Pfam | RING-variant domain | 110 | 161 | IPR011016 | GO:0008270 | |
| Blo07g01162 | 232 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 99 | 171 | IPR013083 | - | |
| Blo07g01162 | 232 | PANTHER | OS01G0850200 PROTEIN | 11 | 232 | - | - | |
| Blo07g01162 | 232 | SMART | ringv_2 | 109 | 162 | IPR011016 | GO:0008270 | |
| Blo07g01162 | 232 | PANTHER | ZINC FINGER, RING-CH-TYPE | 11 | 232 | - | - | |
| Blo07g01162 | 232 | SUPERFAMILY | RING/U-box | 107 | 165 | - | - | |
| Blo07g01162 | 232 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 102 | 168 | IPR011016 | GO:0008270 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo07g01162 | Blo09g00251 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo03g01223 | Blo-Chr3:38489521 | Blo07g01162 | Blo-Chr7:31465903 | 1.07E-27 | dispersed | |
| Blo07g01162 | Blo-Chr7:31465903 | Blo02g00064 | Blo-Chr2:439004 | 1.29E-18 | dispersed | |
| Blo14g00871 | Blo-Chr14:32255385 | Blo07g01162 | Blo-Chr7:31465903 | 9.23E-32 | transposed | |
| Blo13g00786 | Blo-Chr13:30606425 | Blo07g01162 | Blo-Chr7:31465903 | 2.41E-44 | wgd | |
| Blo07g01162 | Blo-Chr7:31465903 | Blo09g00251 | Blo-Chr9:11365096 | 9.95E-119 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo07g01162 | - | - | csv:101218915 | 343.584 |