Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01176 GCCGTGACTGTGAAAATGCTCTGTATGGTTACTCTGCTCTCCCTTTTTGCAGTTTCAAATGCCAGAATCCCCGGTACTTACGGCGGCGGGCAGTGGCAGACTGCCCACGCCACTTTCTACGGCGGCAGTGACGCCTCTGGAACCATGGGCGGTGCTTGTGGTTACGGTAATTTGTACAGCCAGGGCTACGGCGTAAACACGGCGGCGTTGAGCACAGCTTTATTCAACAACGGGCTGAGCTGCGGCGCTTGCTTCGAAATTAAGTGCGATAACGACCCAAAATGGTGCCACCCTGGAAGTCCTTCAATCTTGGTCACTGCCACTAACTTCTGCCCTCCTAACTACGCTCTTCCGAATGATAACGGCGGTTGGTGCAACCCTCCTCGGCCTCACTTCGACCTCGCCATGCCTATGTTTCTGAAGATCGCCGAGTACCGCGCCGGTATTGTCCCCGTTGCCTTTCGCCGCGTTCCATGTAGAAGGCCAGGCGGAATCAGATTCACAATCAACGGCTTCCGTTACTTCAACCTGGTTCTGATCACCAACGTCGCGGGTGCTGGAGACCTCGTGTGGGTGAGCGTAAAGGGCACAAAGGCTGGTTGGATGAACATGAGCCGGAACTGGGGCCAGAACTGGCAGTCCAACGCCGTCTTGGTCGGCCAGTCCCTTTCCTTCAGAGTAACCGGCAGCGACAGACGCACCTCCACATCGTGGAACGTGGCACCATCCAATTGGCAGTTCGGCCAGACTTTCGCCGGAAAGAATTTCCGCGTC 774 56.33 AVTVKMLCMVTLLSLFAVSNARIPGTYGGGQWQTAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCDNDPKWCHPGSPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRRPGGIRFTINGFRYFNLVLITNVAGAGDLVWVSVKGTKAGWMNMSRNWGQNWQSNAVLVGQSLSFRVTGSDRRTSTSWNVAPSNWQFGQTFAGKNFRV 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31647090 31648570 + BLOR19108 Blo07g01176 63700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01176 258 Pfam Expansin C-terminal domain 165 242 IPR007117 -
Blo07g01176 258 SUPERFAMILY PHL pollen allergen 161 252 IPR036749 -
Blo07g01176 258 PANTHER EXPANSIN-A15 3 257 IPR002963 GO:0009664
Blo07g01176 258 Gene3D - 165 256 IPR036749 -
Blo07g01176 258 SMART dpbb_1 67 154 IPR007112 -
Blo07g01176 258 PRINTS Expansin signature 89 100 IPR002963 GO:0009664
Blo07g01176 258 PRINTS Expansin signature 163 175 IPR002963 GO:0009664
Blo07g01176 258 PRINTS Expansin signature 175 196 IPR002963 GO:0009664
Blo07g01176 258 PRINTS Expansin signature 62 76 IPR002963 GO:0009664
Blo07g01176 258 PRINTS Expansin signature 122 139 IPR002963 GO:0009664
Blo07g01176 258 PRINTS Expansin signature 103 113 IPR002963 GO:0009664
Blo07g01176 258 PRINTS Expansin signature 210 231 IPR002963 GO:0009664
Blo07g01176 258 PRINTS Expansin signature 139 152 IPR002963 GO:0009664
Blo07g01176 258 PRINTS Expansin signature 239 255 IPR002963 GO:0009664
Blo07g01176 258 PRINTS Expansin/Lol pI family signature 147 163 IPR007118 GO:0005576
Blo07g01176 258 PRINTS Expansin/Lol pI family signature 201 215 IPR007118 GO:0005576
Blo07g01176 258 PRINTS Expansin/Lol pI family signature 239 253 IPR007118 GO:0005576
Blo07g01176 258 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Blo07g01176 258 PRINTS Expansin/Lol pI family signature 31 46 IPR007118 GO:0005576
Blo07g01176 258 PRINTS Expansin/Lol pI family signature 49 67 IPR007118 GO:0005576
Blo07g01176 258 PANTHER EXPANSIN 3 257 - -
Blo07g01176 258 SUPERFAMILY Barwin-like endoglucanases 11 182 IPR036908 -
Blo07g01176 258 Gene3D - 17 160 IPR036908 -
Blo07g01176 258 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 50 164 IPR007112 -
Blo07g01176 258 Pfam Lytic transglycolase 67 153 IPR009009 -
Blo07g01176 258 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 174 253 IPR007117 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01112 Blo07g01176 CCT
Blo01g01112 Blo07g01176 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01176 Blo-Chr7:31647090 Blo13g00884 Blo-Chr13:31385612 2.11E-154 dispersed
Blo16g01112 Blo-Chr16:39592483 Blo07g01176 Blo-Chr7:31647090 4.96E-124 dispersed
Blo01g01112 Blo-Chr1:39657479 Blo07g01176 Blo-Chr7:31647090 1.03E-158 wgd
Blo12g00426 Blo-Chr12:21683742 Blo07g01176 Blo-Chr7:31647090 7.63E-138 wgd
Blo13g01073 Blo-Chr13:32906708 Blo07g01176 Blo-Chr7:31647090 3.48E-139 wgd
Blo13g00766 Blo-Chr13:30398246 Blo07g01176 Blo-Chr7:31647090 4.97E-163 wgd
Blo14g00114 Blo-Chr14:820763 Blo07g01176 Blo-Chr7:31647090 1.83E-139 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01176 - - csin:114261994 490.345