Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01231 ATGGCCTACGCTTGTGCTTCTTCTGCCGTTACGGCTGTGGGCATGTCTTCTTCTTCGTCTTCTTCCTCTCCCAGGCAACTAATGAACATTATAGTACACTGTTTACAGTTTAGGTCTTCATCTAAAATGAAGTATATTAACATGGCAGTTGCATTGCAGTTTGCAGAAGGGCTGCGCTTTTCTGACGGGAAGCAAATTGAGAGTGACGAAGGGGAAGGCTGTTTGCAACTCTGCTGCAGCGTGATCCGTCGCTGGTCTGATCCGGAGAGTCTGAGATGGAACCAGCAAGCGGAGATAGTTCACTGCCGATGGGCGATGTTAGGCGCCGCCGGTATTTTCATCCCGGAGTTTCTCACTAAGATCGGCATCCTCAACGCCCCATCGTGGTATACTGCCGGAGAGCTAAACTACTTCACCGACACGACCACCCTCTTCATAATTGAGCTCATTTTGATCGGATGGGCGGAGGGGAGAAGATGGGCCGACATCCTCAAGCCTGGAAGCGTCAACACCGACCCCATCTTCTCCAACAACAAGCTCACCGGCACTGACGTCGGCTACCCCGGTGGCCTCTGGTTCGACCCTCTCGGGTGGGGATCTGGGTCGCCAGAGAAGATCAAGGAGTTGAGAACCAAGGAGATCAAGAACGGTAGACTGGCTATGTTGGCCGTGATGGGGGCGTGGTTCCAACACATCTACACCGGAACTGGCCCTATCGACAACCTCTTTGCCCACCTTTCCGATCCCGGCCATGCCACCGTTTTCGCTGTAAGTAGATTATCATCTCTCAAACAAACTCTTCGCCCTCACCATTATGCTCTTACATCTGCTCACTTCATTCTTCTGGCTGTGTTTCTGTGCAGGCTTTCACACCCAAGTGAGGAAGCAAGGGGACCGCCGGGGGAGAGGAGAGTAAATGACTTGTACACTACCCTTTGTTAA 942 52.23 MAYACASSAVTAVGMSSSSSSSSPRQLMNIIVHCLQFRSSSKMKYINMAVALQFAEGLRFSDGKQIESDEGEGCLQLCCSVIRRWSDPESLRWNQQAEIVHCRWAMLGAAGIFIPEFLTKIGILNAPSWYTAGELNYFTDTTTLFIIELILIGWAEGRRWADILKPGSVNTDPIFSNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLSDPGHATVFAVSRLSSLKQTLRPHHYALTSAHFILLAVFLCRLSHPSEEARGPPGERRVNDLYTTLC 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32374725 32375850 + BLOR19163 Blo07g01231 63755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01231 313 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 257 IPR001344 GO:0009765|GO:0016020
Blo07g01231 313 SUPERFAMILY Chlorophyll a-b binding protein 86 256 - -
Blo07g01231 313 Pfam Chlorophyll A-B binding protein 86 231 IPR022796 -
Blo07g01231 313 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 257 - -
Blo07g01231 313 Gene3D Chlorophyll a/b binding protein domain 58 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00576 Blo-Chr1:6296913 Blo07g01231 Blo-Chr7:32374725 4.30E-69 dispersed
Blo07g01231 Blo-Chr7:32374725 Blo13g00003 Blo-Chr13:29525 1.32E-54 dispersed
Blo07g01231 Blo-Chr7:32374725 Blo09g00381 Blo-Chr9:14647042 2.12E-124 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01231 K08908 - ini:109175692 344.739