Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo07g01240 | ATGACCTCCACAGCAATGGCCGACTACGACCTCACCCAACGAATCGCTCCCAATCTCGATCGTCACCTCGTATTCCCGCTGCTTGAATTTCTTCAGGAACGGCAGCTTCACCCCGATGAGCAGATCCTCAAGTCTAAGATTGAACTTCTCAATAAGACCAACATGGTGGACTACGCCATGGACATTCACAAGTCGCTTTACCATTCCGAAGAAGTGCCTCAGGATATGGTGGAGAGGAGAGCTGAGGTGGTTGCGCGGCTTAAGGCTTTGGAAGAAGGTGCGGCGCCTATTGTTGCTTTTCTTCAGAATGCCTCTGCGGTTCAGGAGTTGAGGGCTGATAAGCATTATAATCTTCAAATGCTTAATGATCGCTATCAGATCGGTCCAAACCAGATAGAGGCGTTGTATCAATATGCTAAGTTTCAGTTTGAGTGTGGAAACTACTCTGGAGCTGCAGATTATTTGTATCAGTACAGGGCCTTATGCACAAATAGCGAAAGGAGTTTGAGTGCATTATGGGGAAAGCTGGCTGCAGAAATATTGATGCAGAATTGGGACATTGCTCTGGAAGAACTGAATCGATTGAAAGAAATTATTGACTCAAAGAGTTTTCAATCACCAATGAGTCAGGTCCAAAGCCGAATATGGCTAATGCACTGGAGTCTGTTCATCTTTTTTAATCATGATAATGGAAGAACACAGATTATTGACCTATTTAATCAAGACAAGTATTTAAATGCCATTCAAACTAATGCTCCCCATCTGTTACGCTACCTGGCCACTGCATTCATTGTGAACAAGAGGAGGAGACCTCAGTTCAAAGATTTTATAAAGGTTATGCAACCAGACCAGTGCACGTACAAAGATCCTATCACAGAGTTCTTAGCTTGTGTGTATGTCAACTATGATTTTGATGGCGCACAAAAGAAAATGAAAGAGTGCGAAGAAGTGATATTGAATGATCCATTTCTTGGTAAACGAGTTGAAGATGGAAACTATTCAACTGTTCCATTGAGAGATGAGTTTCTAGAGAATGCACGTTTATTCATCTTTGAGACATATTGCCAAATACATCGGCGTATAGAAATGAGTGTTCTTGCTGAGAAATTGAACCTGAATTATGAGGATGCTGAGAGATGGATTGCAAATCTTATCCAAGGCTCAAAGCTCGACGCCAGGATTGATTCAAAGTTGGGAACCGTCATCATGGAACCCAACCATCCAAATGTGTACGAGCAGCTGATAGACCACACCAAGGCATTATCGGGGCGAACTTACAAGTTAGTCAGTCAACTCCTAGAACATTCCCAGACTCAGGCAGCTCGTTAA | 1329 | 43.04 | MTSTAMADYDLTQRIAPNLDRHLVFPLLEFLQERQLHPDEQILKSKIELLNKTNMVDYAMDIHKSLYHSEEVPQDMVERRAEVVARLKALEEGAAPIVAFLQNASAVQELRADKHYNLQMLNDRYQIGPNQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNWDIALEELNRLKEIIDSKSFQSPMSQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVMQPDQCTYKDPITEFLACVYVNYDFDGAQKKMKECEEVILNDPFLGKRVEDGNYSTVPLRDEFLENARLFIFETYCQIHRRIEMSVLAEKLNLNYEDAERWIANLIQGSKLDARIDSKLGTVIMEPNHPNVYEQLIDHTKALSGRTYKLVSQLLEHSQTQAAR | 442 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 32455567 | 32458557 | + | BLOR19172 | Blo07g01240 | 63764 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo07g01240 | 442 | Pfam | eIF3 subunit 6 N terminal domain | 10 | 142 | IPR019010 | - | |
Blo07g01240 | 442 | Gene3D | - | 241 | 438 | - | - | |
Blo07g01240 | 442 | SUPERFAMILY | TPR-like | 125 | 197 | IPR011990 | GO:0005515 | |
Blo07g01240 | 442 | PIRSF | Transl_init_eIF3e | 5 | 442 | IPR016650 | GO:0003743|GO:0005737|GO:0005852 | |
Blo07g01240 | 442 | SUPERFAMILY | Winged helix DNA-binding domain | 337 | 408 | IPR036390 | - | |
Blo07g01240 | 442 | SMART | eIF3_N_2 | 10 | 142 | IPR019010 | - | |
Blo07g01240 | 442 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 337 | 421 | - | - | |
Blo07g01240 | 442 | ProSiteProfiles | PCI domain profile. | 224 | 408 | IPR000717 | - | |
Blo07g01240 | 442 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E | 6 | 440 | IPR016650 | GO:0003743|GO:0005737|GO:0005852 | |
Blo07g01240 | 442 | Hamap | Eukaryotic translation initiation factor 3 subunit E [EIF3E]. | 7 | 434 | IPR016650 | GO:0003743|GO:0005737|GO:0005852 | |
Blo07g01240 | 442 | Pfam | PCI domain | 290 | 404 | IPR000717 | - | |
Blo07g01240 | 442 | SMART | PINT_4 | 337 | 421 | IPR000717 | - | |
Blo07g01240 | 442 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E | 6 | 440 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo07g01240 | Blo-Chr7:32455567 | Blo16g00722 | Blo-Chr16:28037524 | 1.23E-103 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo07g01240 | K03250 | - | rcu:8268657 | 811.986 |