Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01274 ATGTCTGGTCCGGTTTGGGCGACCGTGGACGCTAACCGTGTAGAGCTAGGGCACAGATTCGTTCGGCTGATCACAATTGCGAGTTCGGGCTGCGATTCTGGCGTTGGTTCGAGGTTAGCCAGTCGATTTTTTCCTCCTCCGTTTTCTGTTGATAGGAGGAGGGCGAAAGAGTTCAAGGTCCTACCTTTCTCTTTTCCCGCCATGGAAGCGATGCAAATCGATTCGGAGCAAAATCTTCGGCGACTGCAATCTTCCTACAGATCCTTGGACGAGAAATATGATATTCAGAAGGAGGAGTACAGGGGTCAGCAGTACAGTCAGATTTACTTTGCGCGTCTCCAGCTTATGAGAGCGCTCCTTTCTTCCCTTGTTCCTAACTGGAAACCCCATCTGCCTGTCTGCACTGTGCTGGAGTTGGAAGATGACAAGGAATGCATCATAGTTGGAACCATTTACAAGCACATGAAACTCAAGCCCACAATTCTGCACGAGTATTCAAAAGAGAGATCAGTCACTCCACTAGTTAAGCCACATAACTTTATGCACCCTGATGATCAACTAGTTTTGGAAGATGAAAGTGGAAGAGTGAAGCTTTCTGGAACTATGATTTCACCCTCGACGTTTGTAACAGCAGGGATAGTTGTTGCTTTGCATGGAAAGGAAACTTCTGCTGGCGACTTTTTGGTATTAGATGTCTTAGAAGCTGGACTTCCACATCAGAGAGAGGTGCTGCATATGTTAAGGGAAGACAAGTATGTTGTCATTGTGTCAGGGCTAAGCATTGGTAGTAGCACTTCTAACCCCCTGCAGTTTCAGCTTCTTGTTGATCATTTAACTGGGCATTTAGGAGATGAGAAGGAACAAGGTATTGCAGCAAAAATAGTTCGGCTTGTAATTGCTGGAAATTCTGTTGAAATATCTCGGGGGCTTCTTAATGGACAGAATTTGGCCAGTAAAGATCAGTCAAGGCTGTCTGAGCCTATCACCGAACTGGATATCTTGTTGACTCAGCTTGTTGCTGGTTTACCTGTGGACATCATGCCTGGTCCAAGTGATCCGGCCAACTTTTCTTTACCTCAGCAGAAAAAAGTAAAATCCTTTAACATAGACGATCTCGCAAAATACTCAGAGGCAAAGGATAAAGTTGAATTTATGGAGAGGACATTGAAATGGAGGCATCTGGCTCCCACTGCTCCAAATACTCTTGGCTGTTATCCTTTCACGGATAAGGATCCTTTCCTGATTGAGGATTGTCCTCGTGTTTATTTCGTAGGTAATCAAGATACCTATGATACACGCCTAATTGAAGGGCATGAGGGGCAGATGGTCAGACTCATTTGTGTTCCAAAATTCTGCAAAACAGGCGATGCTGTTATGGTAAACTTAAGAAGTCTCGAATGCCATACTCTCAGTTTTCGGACCGATTTCAGCTAG 1434 44.98 MSGPVWATVDANRVELGHRFVRLITIASSGCDSGVGSRLASRFFPPPFSVDRRRAKEFKVLPFSFPAMEAMQIDSEQNLRRLQSSYRSLDEKYDIQKEEYRGQQYSQIYFARLQLMRALLSSLVPNWKPHLPVCTVLELEDDKECIIVGTIYKHMKLKPTILHEYSKERSVTPLVKPHNFMHPDDQLVLEDESGRVKLSGTMISPSTFVTAGIVVALHGKETSAGDFLVLDVLEAGLPHQREVLHMLREDKYVVIVSGLSIGSSTSNPLQFQLLVDHLTGHLGDEKEQGIAAKIVRLVIAGNSVEISRGLLNGQNLASKDQSRLSEPITELDILLTQLVAGLPVDIMPGPSDPANFSLPQQKKVKSFNIDDLAKYSEAKDKVEFMERTLKWRHLAPTAPNTLGCYPFTDKDPFLIEDCPRVYFVGNQDTYDTRLIEGHEGQMVRLICVPKFCKTGDAVMVNLRSLECHTLSFRTDFS 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32923069 32931515 + BLOR19206 Blo07g01274 63798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01274 477 CDD MPP_PolD2_C 252 472 IPR041863 -
Blo07g01274 477 Coils Coil 79 99 - -
Blo07g01274 477 Pfam DNA polymerase alpha/epsilon subunit B 368 430 IPR007185 GO:0003677|GO:0006260
Blo07g01274 477 Pfam DNA polymerase alpha/epsilon subunit B 253 361 IPR007185 GO:0003677|GO:0006260
Blo07g01274 477 Pfam DNA polymerase delta subunit OB-fold domain 104 232 IPR040663 -
Blo07g01274 477 Gene3D - 111 235 - -
Blo07g01274 477 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 75 362 IPR024826 -
Blo07g01274 477 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 368 473 IPR024826 -
Blo07g01274 477 Gene3D - 240 365 - -
Blo07g01274 477 Gene3D - 366 476 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01274 K02328 - vvi:100241865 635.18