Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01279 ATGGAGCTCGCTCTCAGCCTCAGGCCTTTCTCCTTCCTCGATAAGATCCATAAAAACGACGAGGATTTGGGGTTTTGCATGGGGTTAGGATGTGGGAGTGGTTTCTCTGCTACTGAAGAAGAGAAAATGGAGGCCGACAATGGTGGAGCTTCGGATCCGCCTCTTCAGCTTCGTCTTCTTCCTTCTGCTCCTGTTCCTCGTCGGATTCCTTTCCCTTGGCTTTCCGACCGCATGATATCTGAACCAGGATCTTCGGACGGCTCAGGAAGAGCTCTCGACGTGAATCAGCCACCGGCAGCGACGTCTGCGGCGGAGGACGGCGACGATAGGGTGGCTCTTTCGTCTCCGAACAGCGCCGTTTCTTCATTTCCCGTGGAATTTTGTGCCGGAAAAGGCGGATCGGGAGGAAAAAGCAAGAGGGAGTTGGAAATGGAAACCGAAAGAACGACCTCTAGAGCGAGCGACGAAGAAGACAACGGCCTGTGTAGAAAAAAGCTCCGGCTGTCCAAAGAGCAGTCGTCTTTTCTTGAAGAAAGCTTCAAAGAACACAGTACTTTAAATCCAAAGCAAAAGCTCGGTCTAGCTAAGAAGTTGAACCTTCGTCCTCGCCAAGTAGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAAGTGGATTGCGAATATTTAAAGAGGTGTTGCGAGAAACTGACGGAAGAGAACAGAAGATTGCAGAAGGAAGTTCAAGATCTTCGAGGCTTGAAAGCATCCAACCCTTTCTGCATGCAACTTCCGGCCACCACTCTCACCATGTGCCCCTCCTGCGAGAGCGGTCGCCGCCACCACCACTAA 846 51.18 MELALSLRPFSFLDKIHKNDEDLGFCMGLGCGSGFSATEEEKMEADNGGASDPPLQLRLLPSAPVPRRIPFPWLSDRMISEPGSSDGSGRALDVNQPPAATSAAEDGDDRVALSSPNSAVSSFPVEFCAGKGGSGGKSKRELEMETERTTSRASDEEDNGLCRKKLRLSKEQSSFLEESFKEHSTLNPKQKLGLAKKLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCEKLTEENRRLQKEVQDLRGLKASNPFCMQLPATTLTMCPSCESGRRHHH 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32988904 32990085 + BLOR19211 Blo07g01279 63803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01279 281 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 40 274 - -
Blo07g01279 281 Coils Coil 225 252 - -
Blo07g01279 281 MobiDBLite consensus disorder prediction 131 159 - -
Blo07g01279 281 PANTHER - 40 274 - -
Blo07g01279 281 Gene3D - 167 217 - -
Blo07g01279 281 SMART HOX_1 161 223 IPR001356 GO:0003677
Blo07g01279 281 SMART halz 219 262 IPR003106 GO:0006355|GO:0043565
Blo07g01279 281 Coils Coil 139 159 - -
Blo07g01279 281 SUPERFAMILY Homeodomain-like 163 228 IPR009057 -
Blo07g01279 281 ProSitePatterns 'Homeobox' domain signature. 194 217 IPR017970 GO:0000981|GO:0006355
Blo07g01279 281 ProSiteProfiles 'Homeobox' domain profile. 163 219 IPR001356 GO:0003677
Blo07g01279 281 Pfam HD-ZIP protein N terminus 23 123 IPR006712 GO:0005634
Blo07g01279 281 Pfam Homeobox associated leucine zipper 219 253 IPR003106 GO:0006355|GO:0043565
Blo07g01279 281 Pfam Homeodomain 163 217 IPR001356 GO:0003677
Blo07g01279 281 CDD homeodomain 163 220 IPR001356 GO:0003677
Blo07g01279 281 MobiDBLite consensus disorder prediction 78 117 - -
Blo07g01279 281 MobiDBLite consensus disorder prediction 136 159 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00622 Blo-Chr6:29128151 Blo07g01279 Blo-Chr7:32988904 7.60E-78 dispersed
Blo07g01279 Blo-Chr7:32988904 Blo12g01004 Blo-Chr12:28027205 8.51E-55 dispersed
Blo05g00182 Blo-Chr5:1733002 Blo07g01279 Blo-Chr7:32988904 5.28E-90 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12682 PF04618 HD-ZIP_N 7.30E-07 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01279 K09338 - qsu:112028347 378.252