Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01368 ATGCCCGCAGAAGCTTCGATTTGTCCCGCAAATCGTCCACTCCGTGCCCTAGCCGCAACTCGAGTCATTGTTCTTCTTCGCTCTCACAGCGCCTCCCACCATGAAGAACCCACCGGCAAGCTCCCTTTCCTGACGCATCCTAAGCGCCGAGCTCCATCGCCTGCCGACCCTCGATCTTACCCTCTAAATCAAAATCGGACGAAAATGGAGAATTTTTATCGTCCGGTCGGTGGCGCAGTACTGTTCACCGGCGGTGACACTGTTCACCGCGGCGATGTACTGTTCACGCCGGACCGGACACTGTTCACTGTGTACTGTTCACCGACACTGTTCACGCCGGTAACCGGGTTCTCTATGAGAATCGGGTCGCCTGACCCGGCGGTTCTGTTGGGCCCCCCTTTGGGTCGTGACAGTTTTCTTGAAGAGTCTCGCAGGTGGTGGCTTGTTTTCATTGGTGCAGCTATGGCAGCCGAAGCACAGCAAGGTTTGGTTCTGGAAATGGAGAAGAGTGGCTATGGAAATCTGGAGAAGAAGAAGAGGCTGACGAGGGAGCAGTTGGATTCACTGGAGAGGAGCTTCCAGGAGGAGATTAAGCTTGATCCAGACAGAAAAACGAGGCTGTCTAGGGAGCTTGGATTGCAGCCTAGACAAATAGCCATTTGGTTTCAGAATAGACGAGCTAGATGGAAGGCTAAGCAGCTTGAGCATCTCTACGATACCCTCAAACATGAGTTCGATACCATCAATAGAGAAAAACAGAAGCTTCAAGAGGAGGTGATGAAACTGAAAATAATGCTGAGAGAGCAAAGCGGATCGAAGAAACAAGTTTCCACAGTTTACACAGACATATCTGGGGAAGAGACAGTTGAAAGTACATCAGTAGCCATTCGTTGCTCAACCAATCCAAGAGGGACCAACACCAACCGCCAGATCACCGAGTGCAATTATCTCTACAACATGGAGGATTACAACCCTGTTTCTCCACCTTTCTGGGGAGCTCTTCCTTCTTATCCTCAGTGA 1020 50.88 MPAEASICPANRPLRALAATRVIVLLRSHSASHHEEPTGKLPFLTHPKRRAPSPADPRSYPLNQNRTKMENFYRPVGGAVLFTGGDTVHRGDVLFTPDRTLFTVYCSPTLFTPVTGFSMRIGSPDPAVLLGPPLGRDSFLEESRRWWLVFIGAAMAAEAQQGLVLEMEKSGYGNLEKKKRLTREQLDSLERSFQEEIKLDPDRKTRLSRELGLQPRQIAIWFQNRRARWKAKQLEHLYDTLKHEFDTINREKQKLQEEVMKLKIMLREQSGSKKQVSTVYTDISGEETVESTSVAIRCSTNPRGTNTNRQITECNYLYNMEDYNPVSPPFWGALPSYPQ 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33810804 33817983 + BLOR19300 Blo07g01368 63892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01368 339 Pfam Homeobox associated leucine zipper 232 266 IPR003106 GO:0006355|GO:0043565
Blo07g01368 339 Gene3D - 170 237 - -
Blo07g01368 339 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 154 325 IPR045224 GO:0003700
Blo07g01368 339 SMART HOX_1 174 236 IPR001356 GO:0003677
Blo07g01368 339 PRINTS Lambda-repressor HTH signature 203 212 IPR000047 GO:0003677
Blo07g01368 339 PRINTS Lambda-repressor HTH signature 212 228 IPR000047 GO:0003677
Blo07g01368 339 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 154 325 - -
Blo07g01368 339 Coils Coil 172 192 - -
Blo07g01368 339 SUPERFAMILY Homeodomain-like 172 234 IPR009057 -
Blo07g01368 339 ProSitePatterns 'Homeobox' domain signature. 207 230 IPR017970 GO:0000981|GO:0006355
Blo07g01368 339 MobiDBLite consensus disorder prediction 31 63 - -
Blo07g01368 339 ProSiteProfiles 'Homeobox' domain profile. 172 232 IPR001356 GO:0003677
Blo07g01368 339 Coils Coil 224 268 - -
Blo07g01368 339 CDD homeodomain 177 233 IPR001356 GO:0003677
Blo07g01368 339 Pfam Homeodomain 177 230 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01368 Blo-Chr7:33810804 Blo01g00421 Blo-Chr1:4753880 1.36E-27 dispersed
Blo07g01368 Blo-Chr7:33810804 Blo11g00670 Blo-Chr11:7393266 8.73E-28 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12689 PF00046 Homeodomain 2.10E-16 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01368 - - pper:18769447 266.544