Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01372 ATGGCGGCCTTGCTTTCCCTGTTATCGGCTTTAGCATCCGTTCTTGTGCTGGTGTCGGTTGTGTACTGTGGTTTCTCGCCTGCTGTTCTCCCTCTGGAGAGAGCTTTTCCACTCGGTATCCCTGTGGAGCTAGATGATCTCAGAGCTCGAGACAGAATCAGGCACGCACGAATCTTGCAAGGTGTGCTCGGTGGTGTCGTCGACTTCTCAGTCGAAGGTTCCCCCGATCCATACCTCGTTGGGCTTTATTTTACCAAAGTGAAGTTAGGTTCTCCTCCGAGGGAATTCACTGTACAAATAGATACAGGGAGTGACATATTATGGATTACTTGTAGTTCATGCAATGATTGCCCCCAATCAAGCGAACTTGGGATTCAACTAAATTTTTTTGACGTGGCCAGCTCATTAACTGCTGGGCTGATCCCCTGCTCAGACACCATCTGCACTTCTCAATTTCAAACAACAGCAACTCAATGCTCTACCCAGAGTAATCAGTGCGGTTACACCTTCCAGTATGGTGATGGAAGTGGCACATCTGGTTTTTATGTAACCGATTCCTTGTACTTTGACATGATTCTGGGGCAATCTATGATTGCCAACTCCTCAGCTACGATTGTCTTTGGGTGTAGCACATATCAGTCTGGAGATTTGACTAAAACAGACAAAGCAATCGATGGTATTTTAGGGTTTGGTCCAGGGGATTTGTCTGTTATATCACAATTGTCATCTCAAGGAGTAACACCAAAGGTTTTCTCCCATTGTCTGAAAGGAGACGACCATGGAGGTGGAATATTGGTTCTTGGTGAGATTCTGGAGCCAAGTATTGTTTACAGTCCACTTGTTCCATCCCAGCCTCATTATAATTTATATCTTCAGAGCATTGCTGTTAATGGGCAACTGTTATCAATTAATCCATCAGTTTTTGCAACATCTGACAATCGAGGAACTATTGTAGACACTGGAACAACGCTCTCATATCTTGTCGAAGAAGCTTATGATCCGTTTGTCAGTACTATAACTTCTGCTGTTTCTCAATCGGTGTCTTTGATTGTTTCAAAGGGAAACCAGTGTTATCTTGTCTCCACCAGTGTTGCCGAGATATTTCCTCTGGTGAGCTTAAACTTTGCCGGCGGAGTTTCAATGATTTTGAAACCAGAAGATTATCTTATGCATCTCGGGTTTTATGAGGGAGCTGCAATGTGGTGTATTGGGTTTCAGAAAGCTCAAGAAGGGATCACCATCTTAGGAGATCTCGTTCTGAAAGATAAAATCTTTGTTTACGATTTAGATCACCGACGAATTGGGTGGGCAAACTACGATTGTTCACTCTCAGTAAATGTCTCTGTAACTTCTAGCAAGGATGAGTTCATCAATGCAGGTCAGTTGAGTGTGAGTAGCTCATCTAAAGATAAGCTCTTTGACTTTGAGTTTCTTCCCATCAAATTTTTCTTGCTTCTGGCCTCGGCCCTGGCACTAGGAATTCGATGA 1488 43.75 MAALLSLLSALASVLVLVSVVYCGFSPAVLPLERAFPLGIPVELDDLRARDRIRHARILQGVLGGVVDFSVEGSPDPYLVGLYFTKVKLGSPPREFTVQIDTGSDILWITCSSCNDCPQSSELGIQLNFFDVASSLTAGLIPCSDTICTSQFQTTATQCSTQSNQCGYTFQYGDGSGTSGFYVTDSLYFDMILGQSMIANSSATIVFGCSTYQSGDLTKTDKAIDGILGFGPGDLSVISQLSSQGVTPKVFSHCLKGDDHGGGILVLGEILEPSIVYSPLVPSQPHYNLYLQSIAVNGQLLSINPSVFATSDNRGTIVDTGTTLSYLVEEAYDPFVSTITSAVSQSVSLIVSKGNQCYLVSTSVAEIFPLVSLNFAGGVSMILKPEDYLMHLGFYEGAAMWCIGFQKAQEGITILGDLVLKDKIFVYDLDHRRIGWANYDCSLSVNVSVTSSKDEFINAGQLSVSSSSKDKLFDFEFLPIKFFLLLASALALGIR 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33846592 33849709 - BLOR19304 Blo07g01372 63896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01372 495 Gene3D Acid Proteases 68 269 IPR021109 -
Blo07g01372 495 Pfam Xylanase inhibitor N-terminal 83 268 IPR032861 -
Blo07g01372 495 CDD pepsin_A_like_plant 83 441 IPR034161 -
Blo07g01372 495 PRINTS Pepsin (A1) aspartic protease family signature 413 428 IPR001461 GO:0004190|GO:0006508
Blo07g01372 495 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Blo07g01372 495 PRINTS Pepsin (A1) aspartic protease family signature 316 327 IPR001461 GO:0004190|GO:0006508
Blo07g01372 495 Pfam Xylanase inhibitor C-terminal 286 437 IPR032799 -
Blo07g01372 495 ProSiteProfiles Peptidase family A1 domain profile. 83 437 IPR033121 -
Blo07g01372 495 PANTHER ASPARTYL PROTEASES 5 459 IPR001461 GO:0004190|GO:0006508
Blo07g01372 495 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 5 459 - -
Blo07g01372 495 Gene3D Acid Proteases 270 448 IPR021109 -
Blo07g01372 495 SUPERFAMILY Acid proteases 78 444 IPR021109 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01218 Blo-Chr1:45941533 Blo07g01372 Blo-Chr7:33846592 7.77E-169 dispersed
Blo01g01219 Blo-Chr1:45956556 Blo07g01372 Blo-Chr7:33846592 0 dispersed
Blo07g01372 Blo-Chr7:33846592 Blo11g00406 Blo-Chr11:3534199 3.68E-105 dispersed
Blo14g00211 Blo-Chr14:1824159 Blo07g01372 Blo-Chr7:33846592 0 wgd
Blo03g01066 Blo-Chr3:37044521 Blo07g01372 Blo-Chr7:33846592 0 wgd
Blo07g01372 Blo-Chr7:33846592 Blo08g00025 Blo-Chr8:223211 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01372 - - cpap:110822887 733.406