Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo07g01373 | ATGGCGGATGCGACTCCTTCTGATAACGCGGTTTCGAACAGCTCCAACGCAGCAACTGAAGTCACATCTGTTGCGGCGGAGCCGAAGCGTTCTTGGGCCGACGAAGCAGATGATCCGATCGAAGATACTGGAGATTCGACTTCGACTGTAGCTGGGGAAATCGATTCTCTTACAATTGATGAGCAGAAAACACTCGATGAACCGGACGATTCTAACATTAGCGCTGTTACATCTGGTGACACACCATACACATCAGCCAGTACCTTTGAAGATTTAAATCTATCACCTGAGCTATTGAAGGGTTTATATGTTGACATGAAATTCCAGAAGCCTAGTAAAATTCAAGCTATCACCCTGCCAATGATTTTGACTCCTCCACACAAACATTTAGTTGCTCAAGCACACAATGGTTCTGGCAAGACAACTTGCTTTGTGCTTGGCATGTTGAGTCGTGTTGATCCAAATCTAAAGGCTCCTCAAGCACTTTGTATCTGCCCTACAAGAGAGCTGGCTATTCAGAATATTGAAGTTCTTAAGAAGATGGGAAAGTATACTGGCATAACATCAGAGTGTGCTGTGCCAATGGAAAGTACAAATAATGTACCAATCCTAAAACGCGAATCTGTGTCTGCACAAGTAGTTATTGGAACGCCTGGGACAATAAAGAAATGGATTACATCCAAAAAATTGGGCGTGAGCTACATAAGGATTCTCGTTTTTGATGAGGCTGATCACATGCTCGCCGAGGATGGTTTTCAAGATGATTCAGTGAGAATAAGGAATCACATTGAAAAAAGTGGCTCCCAGTGCCAGGTGCTTTTATTCTCAGCTACATTTAATGATGTAGTAAAAAAGTTTGTCTCAATAGTTGTAAGAGAATACAATGAACTTTATGTGAAGAAAGAAGAACTATCTTTGGAAGGTGTGAAGCAGTATAAGGTGATCTGTCTTAATGAAGCTGCCAAAATTCAGGCTATTAAGGACAGAATTTTCGAATTGGGGGAGAATTTGGGGCAGACGATTATTTTTGTCCGCACAAGGAACAGTGCCAGTAGGTTGCACAAAGAACTAGTTAAATATGGTTATGATGTGACTACTATTCAAGGGGCTCTAAGGCATGAGGACAGGGACAAAATAGTCAAAGAGTTTAAAGATGGTTTGACTAAAGTTCTCATATCAACAGACCTTCTGGCTCGAGGTTTTGACCAACAGCAGGTTAACCTGGTTATCAATTACGATCTTCCTGTGAAACATGAATCGACAAACAGAAGCTCTTTCCAGCCTGAACCTGATTATGAGGTGTATTTGCATAGGATTGGTAGGGCTGGGCGATTTGGCCGTAAAGGAGCTGTGTTTAACTTGATCTGTGGCCAAATGGACACAATGCTGATGTCGAAAATTCAGGAATATTTTGGCTCTCAAGTGACGGAGGTAAAAGACAGCAATGAAGACTACGAGCAAGCTCTAAAAGCAGCTGGATTGCTTTGA | 1488 | 42.14 | MADATPSDNAVSNSSNAATEVTSVAAEPKRSWADEADDPIEDTGDSTSTVAGEIDSLTIDEQKTLDEPDDSNISAVTSGDTPYTSASTFEDLNLSPELLKGLYVDMKFQKPSKIQAITLPMILTPPHKHLVAQAHNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNIEVLKKMGKYTGITSECAVPMESTNNVPILKRESVSAQVVIGTPGTIKKWITSKKLGVSYIRILVFDEADHMLAEDGFQDDSVRIRNHIEKSGSQCQVLLFSATFNDVVKKFVSIVVREYNELYVKKEELSLEGVKQYKVICLNEAAKIQAIKDRIFELGENLGQTIIFVRTRNSASRLHKELVKYGYDVTTIQGALRHEDRDKIVKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPVKHESTNRSSFQPEPDYEVYLHRIGRAGRFGRKGAVFNLICGQMDTMLMSKIQEYFGSQVTEVKDSNEDYEQALKAAGLL | 495 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 33851653 | 33855062 | + | BLOR19305 | Blo07g01373 | 63897 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo07g01373 | 495 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 325 | 486 | IPR001650 | - | |
Blo07g01373 | 495 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 159 | 457 | IPR027417 | - | |
Blo07g01373 | 495 | CDD | SF2_C_DEAD | 309 | 455 | - | - | |
Blo07g01373 | 495 | Pfam | Helicase conserved C-terminal domain | 322 | 446 | IPR001650 | - | |
Blo07g01373 | 495 | Gene3D | - | 67 | 303 | IPR027417 | - | |
Blo07g01373 | 495 | Gene3D | - | 304 | 486 | IPR027417 | - | |
Blo07g01373 | 495 | PANTHER | DEAD-BOX HELICASE DBP80 | 64 | 476 | - | - | |
Blo07g01373 | 495 | SMART | helicmild6 | 351 | 446 | IPR001650 | - | |
Blo07g01373 | 495 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 121 | 297 | IPR014001 | - | |
Blo07g01373 | 495 | MobiDBLite | consensus disorder prediction | 69 | 86 | - | - | |
Blo07g01373 | 495 | Pfam | DEAD/DEAH box helicase | 113 | 285 | IPR011545 | GO:0003676|GO:0005524 | |
Blo07g01373 | 495 | SMART | ultradead3 | 107 | 312 | IPR014001 | - | |
Blo07g01373 | 495 | MobiDBLite | consensus disorder prediction | 1 | 86 | - | - | |
Blo07g01373 | 495 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Blo07g01373 | 495 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 87 | 116 | IPR014014 | GO:0003724 | |
Blo07g01373 | 495 | CDD | DEADc_DDX19_DDX25 | 94 | 297 | - | - | |
Blo07g01373 | 495 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 64 | 476 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo07g01373 | Blo-Chr7:33851653 | Blo16g00437 | Blo-Chr16:17295539 | 7.85E-54 | dispersed | |
Blo07g01373 | Blo-Chr7:33851653 | Blo18g00276 | Blo-Chr18:2930723 | 3.01E-65 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo07g01373 | K18655 | - | pvy:116131273 | 702.975 |