Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01373 ATGGCGGATGCGACTCCTTCTGATAACGCGGTTTCGAACAGCTCCAACGCAGCAACTGAAGTCACATCTGTTGCGGCGGAGCCGAAGCGTTCTTGGGCCGACGAAGCAGATGATCCGATCGAAGATACTGGAGATTCGACTTCGACTGTAGCTGGGGAAATCGATTCTCTTACAATTGATGAGCAGAAAACACTCGATGAACCGGACGATTCTAACATTAGCGCTGTTACATCTGGTGACACACCATACACATCAGCCAGTACCTTTGAAGATTTAAATCTATCACCTGAGCTATTGAAGGGTTTATATGTTGACATGAAATTCCAGAAGCCTAGTAAAATTCAAGCTATCACCCTGCCAATGATTTTGACTCCTCCACACAAACATTTAGTTGCTCAAGCACACAATGGTTCTGGCAAGACAACTTGCTTTGTGCTTGGCATGTTGAGTCGTGTTGATCCAAATCTAAAGGCTCCTCAAGCACTTTGTATCTGCCCTACAAGAGAGCTGGCTATTCAGAATATTGAAGTTCTTAAGAAGATGGGAAAGTATACTGGCATAACATCAGAGTGTGCTGTGCCAATGGAAAGTACAAATAATGTACCAATCCTAAAACGCGAATCTGTGTCTGCACAAGTAGTTATTGGAACGCCTGGGACAATAAAGAAATGGATTACATCCAAAAAATTGGGCGTGAGCTACATAAGGATTCTCGTTTTTGATGAGGCTGATCACATGCTCGCCGAGGATGGTTTTCAAGATGATTCAGTGAGAATAAGGAATCACATTGAAAAAAGTGGCTCCCAGTGCCAGGTGCTTTTATTCTCAGCTACATTTAATGATGTAGTAAAAAAGTTTGTCTCAATAGTTGTAAGAGAATACAATGAACTTTATGTGAAGAAAGAAGAACTATCTTTGGAAGGTGTGAAGCAGTATAAGGTGATCTGTCTTAATGAAGCTGCCAAAATTCAGGCTATTAAGGACAGAATTTTCGAATTGGGGGAGAATTTGGGGCAGACGATTATTTTTGTCCGCACAAGGAACAGTGCCAGTAGGTTGCACAAAGAACTAGTTAAATATGGTTATGATGTGACTACTATTCAAGGGGCTCTAAGGCATGAGGACAGGGACAAAATAGTCAAAGAGTTTAAAGATGGTTTGACTAAAGTTCTCATATCAACAGACCTTCTGGCTCGAGGTTTTGACCAACAGCAGGTTAACCTGGTTATCAATTACGATCTTCCTGTGAAACATGAATCGACAAACAGAAGCTCTTTCCAGCCTGAACCTGATTATGAGGTGTATTTGCATAGGATTGGTAGGGCTGGGCGATTTGGCCGTAAAGGAGCTGTGTTTAACTTGATCTGTGGCCAAATGGACACAATGCTGATGTCGAAAATTCAGGAATATTTTGGCTCTCAAGTGACGGAGGTAAAAGACAGCAATGAAGACTACGAGCAAGCTCTAAAAGCAGCTGGATTGCTTTGA 1488 42.14 MADATPSDNAVSNSSNAATEVTSVAAEPKRSWADEADDPIEDTGDSTSTVAGEIDSLTIDEQKTLDEPDDSNISAVTSGDTPYTSASTFEDLNLSPELLKGLYVDMKFQKPSKIQAITLPMILTPPHKHLVAQAHNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNIEVLKKMGKYTGITSECAVPMESTNNVPILKRESVSAQVVIGTPGTIKKWITSKKLGVSYIRILVFDEADHMLAEDGFQDDSVRIRNHIEKSGSQCQVLLFSATFNDVVKKFVSIVVREYNELYVKKEELSLEGVKQYKVICLNEAAKIQAIKDRIFELGENLGQTIIFVRTRNSASRLHKELVKYGYDVTTIQGALRHEDRDKIVKEFKDGLTKVLISTDLLARGFDQQQVNLVINYDLPVKHESTNRSSFQPEPDYEVYLHRIGRAGRFGRKGAVFNLICGQMDTMLMSKIQEYFGSQVTEVKDSNEDYEQALKAAGLL 495
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 33851653 33855062 + BLOR19305 Blo07g01373 63897
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01373 495 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 325 486 IPR001650 -
Blo07g01373 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 457 IPR027417 -
Blo07g01373 495 CDD SF2_C_DEAD 309 455 - -
Blo07g01373 495 Pfam Helicase conserved C-terminal domain 322 446 IPR001650 -
Blo07g01373 495 Gene3D - 67 303 IPR027417 -
Blo07g01373 495 Gene3D - 304 486 IPR027417 -
Blo07g01373 495 PANTHER DEAD-BOX HELICASE DBP80 64 476 - -
Blo07g01373 495 SMART helicmild6 351 446 IPR001650 -
Blo07g01373 495 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 121 297 IPR014001 -
Blo07g01373 495 MobiDBLite consensus disorder prediction 69 86 - -
Blo07g01373 495 Pfam DEAD/DEAH box helicase 113 285 IPR011545 GO:0003676|GO:0005524
Blo07g01373 495 SMART ultradead3 107 312 IPR014001 -
Blo07g01373 495 MobiDBLite consensus disorder prediction 1 86 - -
Blo07g01373 495 MobiDBLite consensus disorder prediction 1 22 - -
Blo07g01373 495 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 87 116 IPR014014 GO:0003724
Blo07g01373 495 CDD DEADc_DDX19_DDX25 94 297 - -
Blo07g01373 495 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 64 476 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01373 Blo-Chr7:33851653 Blo16g00437 Blo-Chr16:17295539 7.85E-54 dispersed
Blo07g01373 Blo-Chr7:33851653 Blo18g00276 Blo-Chr18:2930723 3.01E-65 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01373 K18655 - pvy:116131273 702.975