Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01380 ATGGAGGAGTCATTAGGTCGGGTTCGGGGTCCAACTCAGATGGATGGAAATGCGAGTAATTGTATAGATGTGGCTTCTCCGAATGGTTTCTGCAAGAGATTCAAAGGTTCAGCTGTTAACGGTTTGATTGTCTATACGAGAGAAAGGAAATCTGGTATCAATTTGTGTAATGGCTTTTCCGAGAATGATGAAAGCCAGAAAACTAATAGCTTAGACGAGCTCGAGAACGGTCGGAACTCTTCGCTTGAAGAAGTGAAAAAGATCGAAGAGGTAGAGACATTAGTTATTGATAAGCACCGCAGAAATTTAAAATCTTCCATTTGTGAAAATGCGTTTGAGAGGACGGCACTGAAACCTCCAGCGAGAAGAGAAGCAGAGCACGCTGAGGTCGAAATTGCTGACGATGAAGTGACAAAGAAAGATTTGCCTAGAAAGGTGGTTAGGCGATTTACGCGTTCGGCATTGAGACCTGAACATGAGCGTACAGAGATCTCCTCGACGAAAACAGAAACTGTTGATAAAGAAGACATTTTGAGTATGGAAACAGAGACAGCTACTCCGAAGTATAAGGTGGAAATGAGGATGGTGAAAAAGTCTGCCTCGAGTAAGAGCCTAATGACAGTGAGGGAGCTATTTGAAACTGGCTTCCTAGAAGGAGTACCTGTTGTATATATGGGTAGCAGGAAGGGGATCGATTACGGTCTGCGTGGGACGATTAGAGGTGGTGGGATTTTATGCACGTGTTTATCCTGTAATGGATGCAAAGTTATCCCGCCATCCAAATTTGAGATTCATGCTTGCAAACAATACAAACGAGCCGCACAATATATATGCCTTGAAAATGGTACAAGCCTGTTAGACTTACTGAAGGCATGCAGGGGAAACGCTCTGCATAAACTGGAGGCAACAATTCGGAGTGTAGTCAATTCTTCTTCGGAAGAGAGAATTTTCACTTGCAGCGGGTGTAAAGGGCGCTTTCCTTTACCAAGTTTGGGCCAAGTTGAACCTCTATGCACTTCATGTGCAGAGTCGAAGAAATCTGAACCCATCCCAACCCCACAAACTCCACCGCCTTCTGCACCTGATAGGCCTTGGTCACCAGAGCCGGTCAAGATCTTGAAGTCCCCTCAAAGGACGCCAATGCATATATCTTCACAAAGAAGAAGCGAATCGAAGATAAAAACAAAGTCACCCAAGAGAGTTATGACCTCAAAATCCTCGAAGAGTGCTCCGGTACATATTCGACCACAAAAAAGGATCTCCGAGAAGATAAAAAATAGGTTGTCAAATCCAAAGTCCATTTTGAAGTCCTCGAGAAGTGCTCCCAAATGCGATACTTCACAAAACAAAAGTCAATGGAAGTTAACGACAAAAGATCAACGTTTGCATAAGTTGGTCTTTGAGGAAGGTGGATTGCCTGAGGGAACCGAATTAGCATATTTTGCTCGAGGACAGAAATTGCTCCAAGGTTACAAGAAGGGTTCTGGAATTTTTTGTTGCTGCTGCAATTGTGAGGTTAGTCCTTCACAATTTGAAGTTCATGCTGGTTGGTCGTCTCGAAGAAAACCTTATGCATACATTTATACATCGAATGGGGTGTCTCTCCATGAATTGGCAATCTCTCTCTCGAAAGGGCGCAAATATTCTGCCAATGATAATGATGATGTATGTATAATATGTTTAGATGGTGGGAATCTTCTGCTTTGTGATGGTTGCCCCAGGGCTTTCCACAAAGAATGTGCATCGCTTCCAAGTATTCCTCGTGGAGATTGGTATTGTAAATTTTGTCAGAATATGTACCAAAGAGATAAATTTGTGGAGTATAATGCAAATGCTGTTGCTGCTGGGAGGACTTCTGGAGTTGATCCCATTGATGATATATCCAAAAGATGTATTCGAATAGTCAAAAATATTGAAACTGAACTTAGTGGATGTGTGTTGTGCCGAGGGTCTGATTTCAGCAAATCAGGATTTGGTCCACGCACAATTATACTTTGTGATCAGTGTGAGAAGGAATTTCATGTTGGCTGTTTGAAGGACCATAAAATGGCATTTCTTAAGGAACTACCAAAAGGGAAGTGGTTTTGTGGTACGGATTGCACTAGGATACATTCTGCTCTGCAGAAGCTGCTTTTACGCGGGGAAGAGAAGGTTCCAGCCTCTCTTTGCAGCGTTATGAACAAGAAGCTTGTGGAGAAAGGCTTAGATACTGCTAATGATATTGATGTCAGATGGCAACTTATCAGTGGAAACATTGCTTCACCTGAAACTAGACCTTTAGTCTCAGAAGTTGTTGCCATCTTTCACGATTGCTTCGATCCGATAATTGACATAACAAGTGGCCGCGACCTCATCCCGGCCATGGTTTATGGAAGGGATGTAGGGGGACAAGAGTTTGGGGGAATGTATTGTGCAATATTAATAGTCAACTCATCTGTTGTATCAGCTGCAATGCTTCGAGTTTTCGGCCAAGAACTTGCAGAACTACCCTTAGTTGCCACAAGCTTCGTTAATCGGGGAAAGGGCTATTTTCAAATACTGTTCTCCTGTATTGAGCGGCTCCTTGCTTACATGCGCGTGAAGAACCTTGTTCTCCCGGCTGCTGAAGAAGCCGAATCCATATGGACTGATAAATTCTCTTTTAAGAGGATGACACCCGAGCAGCTTAGTAAGTACAGAAGAATCTGCTACCAAATGGTGACATTCAAAGGCACGTCTATGCTTGAGAAGACGGTTCCCTCGTGCCGAGTCATCAATACATAA 2763 43.29 MEESLGRVRGPTQMDGNASNCIDVASPNGFCKRFKGSAVNGLIVYTRERKSGINLCNGFSENDESQKTNSLDELENGRNSSLEEVKKIEEVETLVIDKHRRNLKSSICENAFERTALKPPARREAEHAEVEIADDEVTKKDLPRKVVRRFTRSALRPEHERTEISSTKTETVDKEDILSMETETATPKYKVEMRMVKKSASSKSLMTVRELFETGFLEGVPVVYMGSRKGIDYGLRGTIRGGGILCTCLSCNGCKVIPPSKFEIHACKQYKRAAQYICLENGTSLLDLLKACRGNALHKLEATIRSVVNSSSEERIFTCSGCKGRFPLPSLGQVEPLCTSCAESKKSEPIPTPQTPPPSAPDRPWSPEPVKILKSPQRTPMHISSQRRSESKIKTKSPKRVMTSKSSKSAPVHIRPQKRISEKIKNRLSNPKSILKSSRSAPKCDTSQNKSQWKLTTKDQRLHKLVFEEGGLPEGTELAYFARGQKLLQGYKKGSGIFCCCCNCEVSPSQFEVHAGWSSRRKPYAYIYTSNGVSLHELAISLSKGRKYSANDNDDVCIICLDGGNLLLCDGCPRAFHKECASLPSIPRGDWYCKFCQNMYQRDKFVEYNANAVAAGRTSGVDPIDDISKRCIRIVKNIETELSGCVLCRGSDFSKSGFGPRTIILCDQCEKEFHVGCLKDHKMAFLKELPKGKWFCGTDCTRIHSALQKLLLRGEEKVPASLCSVMNKKLVEKGLDTANDIDVRWQLISGNIASPETRPLVSEVVAIFHDCFDPIIDITSGRDLIPAMVYGRDVGGQEFGGMYCAILIVNSSVVSAAMLRVFGQELAELPLVATSFVNRGKGYFQILFSCIERLLAYMRVKNLVLPAAEEAESIWTDKFSFKRMTPEQLSKYRRICYQMVTFKGTSMLEKTVPSCRVINT 920
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33895638 33901393 + BLOR19312 Blo07g01380 63904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01380 920 Pfam PHD-finger 557 598 IPR019787 -
Blo07g01380 920 MobiDBLite consensus disorder prediction 427 451 - -
Blo07g01380 920 Pfam Tify domain binding domain 490 540 IPR032308 -
Blo07g01380 920 Pfam Tify domain binding domain 237 292 IPR032308 -
Blo07g01380 920 ProSiteProfiles Zinc finger PHD-type profile. 554 599 IPR019787 -
Blo07g01380 920 SMART PHD_3 556 597 IPR001965 -
Blo07g01380 920 SMART PHD_3 644 701 IPR001965 -
Blo07g01380 920 ProSitePatterns Zinc finger PHD-type signature. 557 596 IPR019786 -
Blo07g01380 920 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 29 918 - -
Blo07g01380 920 CDD PHD1_AIRE 557 596 - -
Blo07g01380 920 SUPERFAMILY FYVE/PHD zinc finger 544 599 IPR011011 -
Blo07g01380 920 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 641 703 IPR013083 -
Blo07g01380 920 MobiDBLite consensus disorder prediction 58 78 - -
Blo07g01380 920 Coils Coil 71 91 - -
Blo07g01380 920 PANTHER AUTOIMMUNE REGULATOR 29 918 - -
Blo07g01380 920 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 543 622 IPR013083 -
Blo07g01380 920 MobiDBLite consensus disorder prediction 344 451 - -
Blo07g01380 920 SUPERFAMILY FYVE/PHD zinc finger 639 698 IPR011011 -
Blo07g01380 920 MobiDBLite consensus disorder prediction 350 365 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01380 Blo-Chr7:33895638 Blo01g00125 Blo-Chr1:1690653 2.20E-44 dispersed
Blo14g00207 Blo-Chr14:1750314 Blo07g01380 Blo-Chr7:33895638 4.50E-06 wgd
Blo07g01380 Blo-Chr7:33895638 Blo09g00531 Blo-Chr9:16520070 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12691 PF16135 TDBD 3.30E-12 No_clan Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01380 - - cpep:111800114 1155.2