Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01383 ATGGCGATTCGTCGCATTGCTGTGGGTAGGCCGGAGGAGGCCACTCATCCCGACGCATTGAAGGCCGCCTTGGCTGAATTCATTTCAACGTTGATTTTCGTTTTCGCTGGCCAAGGTTCCGGCATGGCCTTCTCTAAGCTGACGGACGACGGTTCTGCTACCCCATCCGGCCTCATTGCGGCCTCTCTCGCTCACGGGTTTGGCCTTTTTGTGGCCGTGTCCGTCGGTGCGAATATCTCCGGCGGCCATGTTAACCCTGCTGTCACCTTCGGAGCATTGGTTGGAGGTAACATCACCCTTCTACGTGCCATTCTTTATTGGATCGGCCAACTTCTCGGGTCCACCGTCGCCTGTTTGCTCCTCTGGTTCGTCACTGACATGTCTACAACAGCTTTCTCTCTGTCATCCGGCGTCGGAGTTTGGAACGCTGTCGTTTTCGAAATTGTGATGACCTTCGGATTAGTCTACACGGTTTACGCCACAGCCATCGATCCCAAGAAGGGCAACTTAGGAACCATTGCTCCGATTGCCATTGGTTTGATCGTCGGCGCCAACATTTTAGCCGGCGGAGCTTTCGACGGAGCCTCCATGAACCCAGCCGTGTCTTTTGGCCCAGCCTTGGTCAGCTGGTCATGGACGAACCAGTGGGTCTACTGGGTCGGACCACTCATCGGTGGCGGCTTAGCCGGCTTAGTGTACGAGTTCTTCTTTATCAACCGTAGCCACGAGCAGCTTCCGACAACCGACTATTAG 753 55.25 MAIRRIAVGRPEEATHPDALKAALAEFISTLIFVFAGQGSGMAFSKLTDDGSATPSGLIAASLAHGFGLFVAVSVGANISGGHVNPAVTFGALVGGNITLLRAILYWIGQLLGSTVACLLLWFVTDMSTTAFSLSSGVGVWNAVVFEIVMTFGLVYTVYATAIDPKKGNLGTIAPIAIGLIVGANILAGGAFDGASMNPAVSFGPALVSWSWTNQWVYWVGPLIGGGLAGLVYEFFFINRSHEQLPTTDY 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33920361 33921433 + BLOR19315 Blo07g01383 63907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01383 250 TIGRFAM MIP: MIP family channel proteins 25 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo07g01383 250 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo07g01383 250 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo07g01383 250 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo07g01383 250 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo07g01383 250 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo07g01383 250 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo07g01383 250 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo07g01383 250 PANTHER AQUAPORIN TIP1-1 1 250 - -
Blo07g01383 250 SUPERFAMILY Aquaporin-like 13 245 IPR023271 -
Blo07g01383 250 Pfam Major intrinsic protein 14 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo07g01383 250 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
Blo07g01383 250 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Blo07g01383 250 PANTHER AQUAPORIN-8 1 250 IPR034294 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01187 Blo07g01383 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01187 Blo-Chr1:43990337 Blo07g01383 Blo-Chr7:33920361 1.82E-124 dispersed
Blo03g01143 Blo-Chr3:37834277 Blo07g01383 Blo-Chr7:33920361 3.11E-127 dispersed
Blo07g01383 Blo-Chr7:33920361 Blo17g00072 Blo-Chr17:548820 1.03E-89 dispersed
Blo07g01383 Blo-Chr7:33920361 Blo15g00130 Blo-Chr15:1155224 2.63E-55 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01383 K09873 - pvy:116107287 442.58