Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01404 ATGAGTGTGATCGACATTTTGACCAGAGTTGATGCTATTTGCCAGAAGTACGACAAATACGATGTCGATAAGCAAAAGGATCTCAATCTCGCAGGCGACGATGCCTTTGCTCGCCTCTATGCTTCCGTTGAAGCCGATATCGAAGCCGCTATTCAGAAAGCGGATACTGCTTCAAAGGAGAAGAGCAGGGCATCTGCAGTAGCGATGAATGCTGAGATTCGTCGTACGAAGGCTCGATTGCTGGAGGAGGTTCCGAAGCTGCAGAGACTGGCTTTGAAGAGGGCAAAAGGACTGTCAACTGAAGATCTTGCTGCTCGTAATGATTTGGTCCTTGCTTTGCCTGATAGAATTCAAGCCATACCAGATGGAACTGCAGCTACTGCCCCCAAAACATCTGGGGGTTGGACATCATCAGCTCCTCGCAATGAAATCAAATTTGACTCTGAGGGAAGGTTTGACGATGAATACTTTCAACAAACTGAGGAGTCAAGTCAGTTTAGGCAAGAGTATGAGATGCGGAAAATGAGACAGGCAAGGATTTATTTCCAATGGGATCAAGGTTTGGACACGATAGCGGAAGGGTTGGATACGTTGAAAAATATGGCTCATGATATGAATGAGGAATTTGATAGACAAGTCCCTTTGATGGATGAGATTGACACTAAGGTTGACAAGGCATCATCTGATCTTAAGAATACAAATGTTAGGCTTAAATCCACAGTTAACCAGCTAGCTCTCAATCGCCTCTTAGATAAGATGCAAATGATACTCAGCAATCCTTTTTCTGTGCCCACTTCAAATGATGTGTTTTCTCAAGAACAAATTTCAAACCCTAATCCTAAAACTAATGCAAATCCAGTCGTTAAGAAGAAGAGGAATCTCCCAGATCCAGATGCTGAGGTCATTGCTTTATCTCCTAAGAGCCTCATGGCGACAAATCGATTCATCTGCGAAATATGCAACAAAGGGTTTCAAAGAGACCAAAACTTACAGCTGCACAGAAGAGGTCACAATCTCCCATGGAAGCTCCGGCAAAGGTCGAACAAAGAAGTGCGAAAGAAGGTCTATATTTGCCCGGAAAAAAGTTGCGTACACCATGACCCGTCTCGAGCCCTTGGCGACCTCACCGGAATAAAAAAGCATTTCAGCAGAAAACATGGCGAAAAGAAGTGGAAATGTGAAAAATGTTCAAAGAAATACGCAGTTCAGTCGGACTGGAAAGCTCACTCTAAAACCTGTGGAACGCGAGAGTACAAATGTGACTGCGGAACTCTCTTCTCCAGGAAAGATAGTTTCATCACCCATAGGGCTTTCTGTGATGCACTGGCTGAAGAAAGTGCGAGATTCACTTCAGTTTCAGCTTCAAATCTAAGTTTCATTAATGATGCAGTAAATGAAACTCTTATTGATTCTCAAACCAGTTTGAGTCATGGGTTTTCTAGTCATCAAGCAGTTCAAGATGCTTCTGGAATTCCCCAACTCCGATCAGATTTTCTCCGACACTTTAACGATATGGCTTCCGCTAACTCCATCGGAGCAGATCAGAACGAAACAAGATTATCACTTTGGATGAATCAAGCGAACACTCAGTTCAATCCAATGGAAGAATCAGCGAATGCTAATGTTTTCGGATTGTCTAGTTCTTCAGCTTTGCTGGAGATGGTGCAAACGCCACCTTCCAATCTCTTTGGCAGTCCGACTCATCCGAACTTCAGAATTTCCAATCAATATCCGGGCTTAAACAAAAATGCAACTCTTTCTGCAGATTCTAAAAACCGAAATCTATCTTTATCTGAAGTGAAAGGACTCAAAGAAGAATGTGTAAGCAAAGGAAATATGCTGGAATCTTTGTCTTTTTATTCAGACTCTCAAACTGAAAACACACATTCAAAACCAGCTTCGCCAATGTCAGCAACTGCACTTTTGCAGAAGGCAGCTCGAATGGGGTCTACAAGAAGCAACCCATCTATTATTCCTAACTGCAGCTTCGGACTAATGAGTTCATCTTCTACATCAAGCTTCAATTCTCTAACCAAACCCAGAAGTGATATTCATACAGTCTTTCAAAGTACAAAACAGCCGGAGAACTTTGCAGTTATGGCAGCCTGCAATGGTCTAGATCAGATTATGATGCAAACGAGTGTAATTAAGCAAAAAGAAGCAGTGGGATTTGGCTCTAATGGAGTTGGAAATGGTTTGACGCGGGACTTTCTTGGAGTGGGAGGGAAAGAGGGACATCGTCGGCCATTTTTGGAACATGGGAGACCAGATAATCTGGCTGAGTTTTTTGAGAAAGTTTCCCAAAGTGTAAAGGTTAAAAGATATAGCGAGGCACTTAATGATCTTAATACTGCTATTGAGGCAGATCCAAAACTTTCTGAAGCATATTTTCATCGGGCATCAGTTCTTCGTCAGTTGTGCAGATATGAGGAATCCGAGAAGAACTACAAATCATTTCTGGAGCTAAAACCAGGAAACTCTGCTGCAGACAAGGAGCTTTCTCAATTGCTTCAGGCTAAAGGCGCTCTGGAAACAGCTTTGAAATTGTTTGATTCAGGAGATTTCACAAAATCTTTAGAATATGTGGATAAAGTTGTTCTTGTTTTCTCTCCAGCATGCTCAAGCGCAAAATTCCTCAAAGTTAAACTATTGTTGGCTACGAAAGATTATTCTAGTGCAATTGCTGAATCTGGATACATACTCAAAGAAGATGAAAATGATTTAGAGGCACTGCTGCTACGAGGCCGTGCCTACTACTATTTAGCAGATCACGATGTTGCTTCAAGACACTTCCAGAAAGGTCTTCGCCTAGATCCAGAGCATGTGGACCTGAAGAAAGCATATTTTGCACTGAAAAATTTACTCAAGAAGACTAAAAGCGCGGAAGATAATGCAAATAAGGGCAAGCTACGACTTGCCGTAGAGGACTATGGTGCAGCCCTTGCATTAGATCCCAGCCATCTTGCTTATAATGTGAATCTTCATCTTGGTTTATGTAAGGTCTTGGTCAAGCTTGGTCGAGGAAAGGATGCTCTTTCCAGTTGCAATGAAGCACTTGGCATTGATGCAGAACTTATTGAAGCTTTAGTCCAGAGGGGTGAAGCAAAGCTTTTAACAGAGGACTGGGAAGGAGCTGTAGAAGATCTGAAATCAGCAGCTCAAAAATCACCACAGGATACGAATATTCGGGAAGTACTGATGAAGGCCGAGAAATCTTTGAAGATGAGCAAACGCAAGGACTGGTACAAGATTTTGGGAGTTTCGAAGACTGCAGCTATATCTGAGATCAAGCGTGCATATAAGAAGCTTGCTTTGCAATGGCACCCTGATAAAAATGTTGAAAACAGTGAAGAAGCAGAGAACAAGTTTAGAGAAATTGCGGCCGCATATGAGGTTCTTGGCGATGAAGAAAAACGAACTAGATATGACAGAGGAGAGGACATTGAAGAGATGGGAATGGGAGGTGGTGGAGGAGGGTTCAACCCATTCGGGGGCGGGGGACAGCAATTCACATTTACCTTCGAAGGAGGGTTTCCAGGCGGGTTTGACTTTCAATTTTAA 3561 42.74 MSVIDILTRVDAICQKYDKYDVDKQKDLNLAGDDAFARLYASVEADIEAAIQKADTASKEKSRASAVAMNAEIRRTKARLLEEVPKLQRLALKRAKGLSTEDLAARNDLVLALPDRIQAIPDGTAATAPKTSGGWTSSAPRNEIKFDSEGRFDDEYFQQTEESSQFRQEYEMRKMRQARIYFQWDQGLDTIAEGLDTLKNMAHDMNEEFDRQVPLMDEIDTKVDKASSDLKNTNVRLKSTVNQLALNRLLDKMQMILSNPFSVPTSNDVFSQEQISNPNPKTNANPVVKKKRNLPDPDAEVIALSPKSLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVRKKVYICPEKSCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARFTSVSASNLSFINDAVNETLIDSQTSLSHGFSSHQAVQDASGIPQLRSDFLRHFNDMASANSIGADQNETRLSLWMNQANTQFNPMEESANANVFGLSSSSALLEMVQTPPSNLFGSPTHPNFRISNQYPGLNKNATLSADSKNRNLSLSEVKGLKEECVSKGNMLESLSFYSDSQTENTHSKPASPMSATALLQKAARMGSTRSNPSIIPNCSFGLMSSSSTSSFNSLTKPRSDIHTVFQSTKQPENFAVMAACNGLDQIMMQTSVIKQKEAVGFGSNGVGNGLTRDFLGVGGKEGHRRPFLEHGRPDNLAEFFEKVSQSVKVKRYSEALNDLNTAIEADPKLSEAYFHRASVLRQLCRYEESEKNYKSFLELKPGNSAADKELSQLLQAKGALETALKLFDSGDFTKSLEYVDKVVLVFSPACSSAKFLKVKLLLATKDYSSAIAESGYILKEDENDLEALLLRGRAYYYLADHDVASRHFQKGLRLDPEHVDLKKAYFALKNLLKKTKSAEDNANKGKLRLAVEDYGAALALDPSHLAYNVNLHLGLCKVLVKLGRGKDALSSCNEALGIDAELIEALVQRGEAKLLTEDWEGAVEDLKSAAQKSPQDTNIREVLMKAEKSLKMSKRKDWYKILGVSKTAAISEIKRAYKKLALQWHPDKNVENSEEAENKFREIAAAYEVLGDEEKRTRYDRGEDIEEMGMGGGGGGFNPFGGGGQQFTFTFEGGFPGGFDFQF 1186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 34080193 34093248 - BLOR19336 Blo07g01404 63928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01404 1186 ProSiteProfiles Zinc finger C2H2 type domain profile. 315 337 IPR013087 -
Blo07g01404 1186 Pfam DnaJ domain 1080 1143 IPR001623 -
Blo07g01404 1186 CDD SNARE_Qc 185 238 - -
Blo07g01404 1186 Coils Coil 40 60 - -
Blo07g01404 1186 Gene3D - 182 239 - -
Blo07g01404 1186 SMART c2h2final6 356 386 IPR013087 -
Blo07g01404 1186 SMART c2h2final6 391 411 IPR013087 -
Blo07g01404 1186 SMART c2h2final6 315 337 IPR013087 -
Blo07g01404 1186 Gene3D DnaJ domain 1078 1184 IPR036869 -
Blo07g01404 1186 SMART dnaj_3 1079 1138 IPR001623 -
Blo07g01404 1186 CDD DnaJ 1080 1135 IPR001623 -
Blo07g01404 1186 ProSitePatterns Nt-dnaJ domain signature. 1123 1142 IPR018253 -
Blo07g01404 1186 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 185 240 IPR000727 -
Blo07g01404 1186 ProSiteProfiles dnaJ domain profile. 1080 1146 IPR001623 -
Blo07g01404 1186 SUPERFAMILY Chaperone J-domain 1073 1180 IPR036869 -
Blo07g01404 1186 Pfam Tetratricopeptide repeat 771 826 - -
Blo07g01404 1186 ProSiteProfiles TPR repeat profile. 908 941 IPR019734 GO:0005515
Blo07g01404 1186 SUPERFAMILY TPR-like 756 1062 IPR011990 GO:0005515
Blo07g01404 1186 Pfam Tetratricopeptide repeat 909 941 IPR019734 GO:0005515
Blo07g01404 1186 PRINTS DnaJ domain signature 1138 1157 IPR001623 -
Blo07g01404 1186 PRINTS DnaJ domain signature 1082 1100 IPR001623 -
Blo07g01404 1186 PRINTS DnaJ domain signature 1100 1115 IPR001623 -
Blo07g01404 1186 PRINTS DnaJ domain signature 1118 1138 IPR001623 -
Blo07g01404 1186 MobiDBLite consensus disorder prediction 123 142 - -
Blo07g01404 1186 ProSiteProfiles TPR repeat profile. 793 826 IPR019734 GO:0005515
Blo07g01404 1186 PANTHER DNAJ PROTEIN P58IPK HOMOLOG 755 1186 IPR044620 -
Blo07g01404 1186 Gene3D Tetratricopeptide repeat domain 754 1077 IPR011990 GO:0005515
Blo07g01404 1186 ProSitePatterns Zinc finger C2H2 type domain signature. 317 337 IPR013087 -
Blo07g01404 1186 SMART tSNARE_6 173 240 IPR000727 -
Blo07g01404 1186 SUPERFAMILY SNARE fusion complex 175 238 - -
Blo07g01404 1186 SMART tpr_5 759 792 IPR019734 GO:0005515
Blo07g01404 1186 SMART tpr_5 793 826 IPR019734 GO:0005515
Blo07g01404 1186 SMART tpr_5 1026 1059 IPR019734 GO:0005515
Blo07g01404 1186 SMART tpr_5 908 941 IPR019734 GO:0005515
Blo07g01404 1186 SMART tpr_5 992 1025 IPR019734 GO:0005515
Blo07g01404 1186 SMART tpr_5 948 987 IPR019734 GO:0005515
Blo07g01404 1186 Gene3D Classic Zinc Finger 349 439 - -
Blo07g01404 1186 SUPERFAMILY beta-beta-alpha zinc fingers 314 411 IPR036236 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01404 Blo-Chr7:34080193 Blo12g00911 Blo-Chr12:27295851 1.15E-95 dispersed
Blo16g01053 Blo-Chr16:39048920 Blo07g01404 Blo-Chr7:34080193 2.56E-22 dispersed
Blo05g00028 Blo-Chr5:242398 Blo07g01404 Blo-Chr7:34080193 1.20E-12 transposed
Blo06g00985 Blo-Chr6:33134731 Blo07g01404 Blo-Chr7:34080193 2.16E-102 transposed
Blo11g00867 Blo-Chr11:16496454 Blo07g01404 Blo-Chr7:34080193 1.35E-91 transposed
Blo01g01759 Blo-Chr1:57342509 Blo07g01404 Blo-Chr7:34080193 5.36E-27 transposed
Blo14g00167 Blo-Chr14:1295619 Blo07g01404 Blo-Chr7:34080193 2.41E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12694 PF00226 DnaJ 1.50E-25 CL0392 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01404 K09523 - csin:114256469 668.307