Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g01419 ATGCCACTAATTCCAGAGAGACACTTTCTTTTGCAAGGTGCTAATGGCCCTGGAGATTCAGGACTTGTGCTCTCCACTGACGCCAAACCTCGTTTAAAGTGGACCCATGAGCTCCATGAGCGTTTCATTGAAGCAGTCAGTCAGCTTGGTGGAGCTGAGAAAGCAACACCCAAGACTGTGATGAAAGTAATGGGTATACCTGGACTTACTTTGTATCACTTAAAGAGTCATCTTCAGAAGTACAGGTTGAGCAAGAATGTGCACGGGCAACCTAATGGTGAGACCAACAAAATTGGTGCGGCTGCAGTGGCTGAAAACAGACTGACAGAAGCGAACGGAAGTCACACCAACAACTTCATTGCTGGGTCTCAGACCAACAAAAGCTTAGAGATAAGTGAAGCTCTACACATGCAAATTGAAGTGCAGAGAAGGCTGCACGAGCAGCTTGAGGTACAGCGACACCTGCAGCTGCGGATAGAAGCCCAGGGAAAGTACCTGCAGTCGGTGTTAGAGAAAGCGCAGGAGACGTTAGGAAGGCAGAACATCGGCGCCGTCGGACTTGAAACCGCCAAGGTCCAACTCTCAGAGCTGGTTTCGAAAGTATCAACGCAGTGCCTCGCCGGTGAATTTCCGGAGCTGCAGAGGCTTTGCCCTCAGTCCCTCCAACCTCCGGATGGTTCATTTGAAAGCTGTCTGACATGCTGCGAAGGATCCCTGAAGGACCCCGAATTACACAACGGGAGTTTGGGTAATGTTGGCGGCGTTCGGTTGGACACAAAAGATGATGCGGAAGGGTGGAGTGAGGTCCTGAAAGAGACGGTGTTTTTTTCTTCCATGGGGAAGGAAGGCGAAAGATCAAACAGGAGGGTTCCAGAAGGAAGTGGCGGGGACTTATCGATGAACATGGGGCGGTATTTAGAGGAAAAGGAGGGAAGCAACAACGCGATGAGGGAAGGAGGGTCCCAGTGGAAGGGCGGGAGAGTGAGGGGAAGAGAGGAAAGCTTGTGGAAGAGGGAGGAGTCAGTGAAACAGAAACAAGGAGAGAAGGAGAAAGGGTGGTCAACGGCTCTGGATTTGAATGCAGGGGAGGATGAAAATGGAAGCTGTTCGGAAAGCAAGCAGCTGGACTTGAATGGGTTCAGCTGCGAGTAA 1152 50.95 MPLIPERHFLLQGANGPGDSGLVLSTDAKPRLKWTHELHERFIEAVSQLGGAEKATPKTVMKVMGIPGLTLYHLKSHLQKYRLSKNVHGQPNGETNKIGAAAVAENRLTEANGSHTNNFIAGSQTNKSLEISEALHMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNIGAVGLETAKVQLSELVSKVSTQCLAGEFPELQRLCPQSLQPPDGSFESCLTCCEGSLKDPELHNGSLGNVGGVRLDTKDDAEGWSEVLKETVFFSSMGKEGERSNRRVPEGSGGDLSMNMGRYLEEKEGSNNAMREGGSQWKGGRVRGREESLWKREESVKQKQGEKEKGWSTALDLNAGEDENGSCSESKQLDLNGFSCE 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 34184185 34185963 + BLOR19351 Blo07g01419 63943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g01419 383 PANTHER MYB-RELATED PROTEIN 2 1 381 - -
Blo07g01419 383 MobiDBLite consensus disorder prediction 365 383 - -
Blo07g01419 383 Pfam Myb-like DNA-binding domain 31 82 IPR001005 -
Blo07g01419 383 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 381 IPR044848 GO:0003700
Blo07g01419 383 SUPERFAMILY Homeodomain-like 28 84 IPR009057 -
Blo07g01419 383 MobiDBLite consensus disorder prediction 280 383 - -
Blo07g01419 383 Gene3D - 28 86 - -
Blo07g01419 383 MobiDBLite consensus disorder prediction 324 352 - -
Blo07g01419 383 Pfam MYB-CC type transfactor, LHEQLE motif 130 176 IPR025756 -
Blo07g01419 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 86 IPR017930 -
Blo07g01419 383 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 29 84 IPR006447 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00894 Blo-Chr3:34940684 Blo07g01419 Blo-Chr7:34184185 2.82E-31 dispersed
Blo07g01419 Blo-Chr7:34184185 Blo16g00685 Blo-Chr16:26475340 1.26E-64 dispersed
Blo07g01419 Blo-Chr7:34184185 Blo09g00329 Blo-Chr9:13637275 1.71E-177 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12698 PF00249 Myb_DNA-binding 2.80E-08 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g01419 - - cpap:110816961 432.95