Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00005 ATGGCAGAGGGAGAAAGTTGGCTAGAGTCGGGCTTCGCTAGGGTGGCTGGTTGGGCCAAAGTCCTGCTAGAATTTATTCGAGCAGCAGAGCTGGTGGGCCGAGCATGGATGTCATGGCAAGCGAGCTGGGTAGATGAACTGCCTGTTGCTTATGCTGTAAATAAGTGGGCGTGTAAGTGCTCTGCTCCATACCACGGAAATGAGAGCTTCATCCATGAAGCCAACTGCTCTGCCTCCTGTGCTTGCACCCTAGATGTTGAAAGCAGTGGCAGCAGTATATGGACATGTATGTGTGCATCTGATGGCTTCCCTAAAGTAACAGATAGAAGTGATAAATATAATTGTTTTACAGCCTGCAACTGCACTTCTGGAGGATTGCCTAATGTAGCTCCAACCTCCAAAAGGCAGATATCTACCAAAATGGTCGTGATTATTCTATTTCTTTGTGTAATAATCACAACTTTTGCATTTCTAGCCTCAGTGGTATGCTATCTTTCTCGAAGGGACAAGTTCTCTATTCACTCGTCAGCATTATCACCATATGGACAAACTAATTACAACAGTTTTAGCAACTTGGTTAGTCACAAGAGTTCATCAATATTAGAAATGAGAACTAACGCAGGCCCTCCCACTCGTCATAGCGCAGGATGCTTCTACATAGCCTCTCGGCTATTGAAGACGAAACCTTGGACTATATTTGGAACCATTATTCAGTTCTCCTTCTCTGAATTGGAAAATGCGACCGATAAGTTTTCAAACTCCAACCTTGTAGGACATGGGGGAAGCAGCCTTGTTTATCGTGGTCTGCTTAAAGATGGTTGTATTGTGGCAGTGAAGCGCCTAAAAACTCAAGGAGGTCCAGATGCTGACTCCTTATTTCCTACAGAGATAGAATTACTGTCCAGACTTCATCATTGTCATGTGGTGCCTTTACTTGGCTACTGCTTAGAATCCCAGGGGAAGCGTACTGAGAAGCTACTGGTATACCAATACATGGCTAGGGGTAATTTGAGAGATTGTTTGGATAGTCCCACCAGGGAAAGCATGAATTGGGCTTCTCGTGTTGCAATTGCAATAGGTGCTGCTCGTGGCTTGGAATATCTTCACGAGGCCGCTGCTCCTAGAATTCTGCATAGAGATGTGAAATCAACCAACATTCTTCTGCATGAAGATTGGCAAGCAAAGATCACTGATCTGGGGATGGCTAAAAGATTGAGCACTGATGGTCTACCTAGTTGTTCCAATTCTCCAGCTAGAATGCAAGGGACTTTTGGCTATTTTGCACCTGAGTATGCTATAATTGGAAGAGCCTCTCTTAAGTCTGATGTTTTCAGTTTCGGGGTCGTTCTTCTAGAGCTTATCACAGGTCAACATCCCATCAAGAAATCAGCCAATAAAGGAGAAGAAAGCCTTGTCATCTGGGCTACGCCTCGTATACAAAACAGTAGGAGAGTAATTGCCGAGCTTCCTGACCCACATTTGAAGGGACTCTTCCCTGAGGAAGAGATGCAAATAATGGCTTACTTAGCAAAGGAGTGTCTGCTGTTGGATCCTGATGATAGGCCATCTATGAGTGAAGTAGTTCAGATTCTCTCAACTATTGCTCCAGCAAAATCTCGAAGGAGGAACATCGCTGCAAATATTGGTCGGGGGTGTTCTTCTGCCTACGGATCATATAAAGAAAGAGCCGAGTCAAGTCCTCTTTCAGAGCAACATTTACTAACCAAAACGAGCTCTGATGATGAAATGGAGCTAAGACGAACGCCATCCTGCCGATCTCCGACTTGGGTGCCATCGAATGATGATGGGTCAGTTTGCATTGAAAATGAGAGCGGAGAAGAAGATATTGTTTCAGCTGAGGATATGGGAAGACTAGAACTCTTGAGTTCAACCGCTAGGAGTTGGCGTGCTTCAGACGATGTAATAGTAGATCTATCCGAGCCTCAACTTGAATCATTCTGCATGACAACTTCCCAGCCTCTGCGATGA 1989 44.95 MAEGESWLESGFARVAGWAKVLLEFIRAAELVGRAWMSWQASWVDELPVAYAVNKWACKCSAPYHGNESFIHEANCSASCACTLDVESSGSSIWTCMCASDGFPKVTDRSDKYNCFTACNCTSGGLPNVAPTSKRQISTKMVVIILFLCVIITTFAFLASVVCYLSRRDKFSIHSSALSPYGQTNYNSFSNLVSHKSSSILEMRTNAGPPTRHSAGCFYIASRLLKTKPWTIFGTIIQFSFSELENATDKFSNSNLVGHGGSSLVYRGLLKDGCIVAVKRLKTQGGPDADSLFPTEIELLSRLHHCHVVPLLGYCLESQGKRTEKLLVYQYMARGNLRDCLDSPTRESMNWASRVAIAIGAARGLEYLHEAAAPRILHRDVKSTNILLHEDWQAKITDLGMAKRLSTDGLPSCSNSPARMQGTFGYFAPEYAIIGRASLKSDVFSFGVVLLELITGQHPIKKSANKGEESLVIWATPRIQNSRRVIAELPDPHLKGLFPEEEMQIMAYLAKECLLLDPDDRPSMSEVVQILSTIAPAKSRRRNIAANIGRGCSSAYGSYKERAESSPLSEQHLLTKTSSDDEMELRRTPSCRSPTWVPSNDDGSVCIENESGEEDIVSAEDMGRLELLSSTARSWRASDDVIVDLSEPQLESFCMTTSQPLR 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 44991 50998 - BLOR20175 Blo08g00005 63957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00005 662 Gene3D Transferase(Phosphotransferase) domain 1 332 550 - -
Blo08g00005 662 SUPERFAMILY Protein kinase-like (PK-like) 230 531 IPR011009 -
Blo08g00005 662 Pfam Protein kinase domain 253 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00005 662 ProSitePatterns Protein kinases ATP-binding region signature. 257 279 IPR017441 GO:0005524
Blo08g00005 662 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE NCRK ISOFORM X1 40 659 - -
Blo08g00005 662 SMART serkin_6 251 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00005 662 PANTHER OS01G0750732 PROTEIN 40 659 - -
Blo08g00005 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 376 388 IPR008271 GO:0004672|GO:0006468
Blo08g00005 662 CDD STKc_IRAK 257 531 - -
Blo08g00005 662 Gene3D Phosphorylase Kinase; domain 1 225 331 - -
Blo08g00005 662 MobiDBLite consensus disorder prediction 578 597 - -
Blo08g00005 662 ProSiteProfiles Protein kinase domain profile. 251 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00005 Blo-Chr8:44991 Blo06g00945 Blo-Chr6:32676531 8.46E-74 dispersed
Blo14g00185 Blo-Chr14:1479277 Blo08g00005 Blo-Chr8:44991 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84423 PF00069 Pkinase 3.50E-42 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00005 - - vvi:100263865 739.184