Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo08g00006 | ATGGATTTGACGGGAGAAAGGTCTGAACCTCACGTCGCCCAACAAAGGCGCCGGGAAAGGCTAAGAGTTCAGCAAATTAGTTCAACTCAATCTATTCCGACTGATGATAACCAATTCTTTTTTCATTCAGAATTAAGGCCAGATCTTGGTGAAGTTGGCAATGCAAGTTCTCTTTTTGACCCATCTTTCCTCCCCTCGGAACTGATGGGGTTTTCGTCGGATTTTAACGCTCTACCTTCCCAAAGTGACTCAATCGGACGTCAGCAAATGTCAGAGAATACCCTCTTTCGTTCTCAGTGGATCTCATCTGATTTCAATTTATCATCTAAAGTTCAACATCAAGCTGGAGATTGGATGTTGACTTATGGAAGTAGTTCATGGTCTGCGGAAAATAATCCCAATCTAATGATTTCCGGCGAAATAGGTAATGCTTCTGTCCGTCAGCCATACTTGAACCCAAGTTACAGCAATGACTATAATTTTTCCGGTGATCACCTTCCTGAACCAGATCGCCGGAAGCATGCAGGAGAAACTCAGTTCAGTTCTCCACCTTTCCAAAACACCCTACAAGATGTAGTCATTCCGGCGTCTATACGAACTCCGGTATTAGAAAACGGACAGGGGAGGTGGTCCAGTGCAAGTGAGTTTGCCAGTTTTCCATCGTTTAAATATCAAGAAGATTTATTACGCTTTGGAAATTCTAGTTATTGGGTCGACAGATCAGTTCAAAATAGCTTTCAACAAGGTCTTTCTCTATCACTGTCATCAAATCCACCTTCCAAATCGTTGGTTTCTCAGCTTGAAGACGGCTGTGCGTTCGAAGATTTGGAGCAAAGCAGTAGTAAAACAGCCGGAATATCTGGCAATTTCAGTTCAACATCAAAACCGCCCACCATTAGTAAACGCTGTGGAAAGTCTATTCAAGAAACATTTGGCGTTTCTCCAAACGCTTACGGAAACACTGGTCCTCTCGGTCCTTTCACCGGCTATTCAATCATTTTGAAGCGTTCAAAATTTCTGAAGCCTGCCCAGCAATTATTAGAGCAAATTTGTGGTAAAAGTGGATTAAAGTTTGGAAGAACACGCGGCGTGTTGAATAGAACATCTGGAGAAGTCAGTGTCTCAGTTTCTGCCGATGTTTCCGATGCGACAGCAACTAAAGTTCCGTCCAAGGGTTATAACTTAACTTCTTCGTCGTCTATATTTTATGGTCCAGGCGAAACGACCGGTGTTAAAGCCGGGAGCTTTTTCTATGAACCAGTTCGTCCAGACATCCCACGAAAGAAAGCTAAGCTACTGTACATAATGGACGAGGTTGTATGCAGAAGATACAGACAGTATAATCAGCAGATGCAAATGGCTGTGTCGTCGTTTGAATCCGTTGCTGGGCTTGGGTCGGCAATGCCATTCATGTCGTTCGCGTTGAAGACAGTCTCTAGGCAATTTAGATGTCTGAAGAATGTAGTTTCCGAGCAGTTGAGGCATGTGGGGAGAGGGATGGCTGAAGAATTAACGTCACAAAAAGTTGAAGGCAGTAGTGGGCAGCAGTTCAGAGGCGGTGAAGAATGCGTGGAGGAGTATGGTTATGGCGATGGTTGGGATGGCTTCCGTTTGCTCCAACCCCATCAACATCTGTGGAAGCCCCAGAGAGGCCTGCCTGAAAGAGCTGTTGTCGTTCTTAGAGCTTGGCTTTTCGAACATTTTCTTCACCCGTACCCAACAGATGATGATAAGCATATGTTAGCCACTCAAACAGGCTTATCTCGAAACCAGAGTTTCGTATCAAACTGGTTTATAAATGCTCGAGTGAGAGTGTGGAAGCCGATGGTCGAAGAAATACACGTCCTAGAAACTGAAGAACCTCCGAGCGAAACAAATCAAATTCACTACCTGGGAAACAATTCAGAGAGTCAGCGAAACTCTGGAGGAATTGACGATCAGGGTCAGCCATTACAGTGCTTGGATGAAGACAACCCATGGTGGAGCAGCCACGAGAAGCGGTCGAGGGTGGAGAATGAAGAACCATATCCTGCGAGCTTCAATGAACCACCGACGGTAGGGTTCATGCCGTACGACGGCGGTGTGTCTTTAACGCTAGGGCTCCGGCATGAGGTGGAGAATTCTCAGCAACAGCTACCGTTACAACACCAGAATCAACTCGGAAGACAATGTGGAGGCCACTTTCTTGGTGATTTCGTCGGTTAA | 2205 | 45.49 | MDLTGERSEPHVAQQRRRERLRVQQISSTQSIPTDDNQFFFHSELRPDLGEVGNASSLFDPSFLPSELMGFSSDFNALPSQSDSIGRQQMSENTLFRSQWISSDFNLSSKVQHQAGDWMLTYGSSSWSAENNPNLMISGEIGNASVRQPYLNPSYSNDYNFSGDHLPEPDRRKHAGETQFSSPPFQNTLQDVVIPASIRTPVLENGQGRWSSASEFASFPSFKYQEDLLRFGNSSYWVDRSVQNSFQQGLSLSLSSNPPSKSLVSQLEDGCAFEDLEQSSSKTAGISGNFSSTSKPPTISKRCGKSIQETFGVSPNAYGNTGPLGPFTGYSIILKRSKFLKPAQQLLEQICGKSGLKFGRTRGVLNRTSGEVSVSVSADVSDATATKVPSKGYNLTSSSSIFYGPGETTGVKAGSFFYEPVRPDIPRKKAKLLYIMDEVVCRRYRQYNQQMQMAVSSFESVAGLGSAMPFMSFALKTVSRQFRCLKNVVSEQLRHVGRGMAEELTSQKVEGSSGQQFRGGEECVEEYGYGDGWDGFRLLQPHQHLWKPQRGLPERAVVVLRAWLFEHFLHPYPTDDDKHMLATQTGLSRNQSFVSNWFINARVRVWKPMVEEIHVLETEEPPSETNQIHYLGNNSESQRNSGGIDDQGQPLQCLDEDNPWWSSHEKRSRVENEEPYPASFNEPPTVGFMPYDGGVSLTLGLRHEVENSQQQLPLQHQNQLGRQCGGHFLGDFVG | 734 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 52680 | 56192 | - | BLOR20176 | Blo08g00006 | 63958 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo08g00006 | 734 | MobiDBLite | consensus disorder prediction | 162 | 184 | - | - | |
Blo08g00006 | 734 | CDD | homeodomain | 546 | 609 | IPR001356 | GO:0003677 | |
Blo08g00006 | 734 | SMART | prehox3 | 328 | 491 | IPR006563 | - | |
Blo08g00006 | 734 | Pfam | Associated with HOX | 333 | 489 | IPR006563 | - | |
Blo08g00006 | 734 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Blo08g00006 | 734 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Blo08g00006 | 734 | Pfam | Homeobox KN domain | 563 | 604 | IPR008422 | GO:0003677|GO:0006355 | |
Blo08g00006 | 734 | SUPERFAMILY | Homeodomain-like | 550 | 614 | IPR009057 | - | |
Blo08g00006 | 734 | SMART | HOX_1 | 546 | 612 | IPR001356 | GO:0003677 | |
Blo08g00006 | 734 | MobiDBLite | consensus disorder prediction | 620 | 687 | - | - | |
Blo08g00006 | 734 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 77 | 706 | - | - | |
Blo08g00006 | 734 | Gene3D | - | 549 | 613 | - | - | |
Blo08g00006 | 734 | MobiDBLite | consensus disorder prediction | 659 | 673 | - | - | |
Blo08g00006 | 734 | ProSiteProfiles | 'Homeobox' domain profile. | 565 | 608 | IPR001356 | GO:0003677 | |
Blo08g00006 | 734 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN 8 | 77 | 706 | - | - | |
Blo08g00006 | 734 | MobiDBLite | consensus disorder prediction | 620 | 647 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo07g01167 | Blo-Chr7:31519826 | Blo08g00006 | Blo-Chr8:52680 | 1.21E-68 | dispersed | |
Blo08g00006 | Blo-Chr8:52680 | Blo09g00247 | Blo-Chr9:11077374 | 2.69E-70 | dispersed | |
Blo14g00186 | Blo-Chr14:1509403 | Blo08g00006 | Blo-Chr8:52680 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo08g00006 | - | - | jre:109019501 | 508.449 |