Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00038 ATGAAGGTGGTTGCTGCCTATTTGCTGGCCGTTTTGGGAGGGAATACGAGCCCCTCAGTGAAAGATTTGAAGCATATTCTTGGATCAGTTGGAGCAGAGGCAGATGAAGACAAGATCGAGTTTCTCCTGTCTGAAGTCAAAGGGAAAGATATTACAGAGCTAATTGCATCTGGTAGGGAGAAGTTGGCTTCAGTTCCTGCTGGTGGTGGTGGTGCAGTTGCTTATTCTGCCCCTGGCGGTGGTGGCGGAGGTGGTGCCGCTGCACCTGCTGCAGAAGAACAAAAGAAAGAAGAGAAGGTTGAAGAAAAAGAGGAGTCTGATGATGGACGATATGTCACTTGGTTTCTGATATTTGTGCTTTGTATTCTCAACAAAGTTTCTGAAATGGTCCTGGAAGAGTTAGATCCTGTATTAAGATCGAATAATGAATCTGCAAACAATCATTATTCAGATGCTAGGAAGAGGTATTCAATTGAAGATGATATTAATCGCTTATTTCAGGCATTTGATAACAAAAACTCAGGTAGAAGTTCAGGGCAGGCTCATGTAGTAGGTAGAAATACTTGGCAGAAGAGCGCACTGAAAAGGCCAATTGGAGTTGGTTCACTCAATGTCTCCAGCATTGGAATTTCAGAGCCAGTGAGTTTAAAGCAGGCACTGAGAGGGTTATGTATTTCACAGGCAGCAGAAATGGCTGCCATGAAGAGACTATCAAGGCCTGCACAATCACTAGGAGTGTCTGAAGCAGTAACCATTAAAAGGTTATATAGGGCAGTGGTTGTTGAGGCCAGCGGATCTGGTGCTTCTCTGAATGAAGCTAAAGGGAAGTTGGTAGAAGTGTCAATTATGCCAGAAAGAATCGCATCAAAGTTTTCAAATGAGGTGTCTGAATCCGGGCAGAAGTCCAAAACCGAGCTGGTTAATCCAAGCGTTTGTTCTTTTACCTCTTCCGTTGATCCTGTAATGGAAGAAATTGTGGGAAGCGAATTATCATTAGAGGATTCCATTGGATGTGGAATATTGAAAGAGGAGGTTGGGAAGCAACAGTATGCAGAATCATCGTCCAATGATCGTACAGCAAGTGATGAGATTTCTTCTTCCTTGACTGTTTTTTCAAGCAAATCGTCGATGCAAGGAAAAAAAATGGGAGTTTGTAACTCTGAACCTTCTCATTCAAGCTCCGCTGGTGGTGCTAAGTTAAGCAAACCCTATGGCAATGGTCCAAGCCTAATCAAACCTATCTTCCAAGCCAAAAACTTTGTCAAGAAGAAGGCAAAGCTGGAATTGACTTCTTTCTCTATCATTTCCAATAAAATTGCAGCAAATGCTGAGAATGATAAGGTTCCAAAGACTTGTGAAATTGAGAAGCAGATGAATGTCTGTGCTTCCACGCATGAAAGGAAAGAAAACGAGAAAGCTTCGAATGTAAGCTCGGGAGTCAAACAAGGTACTGTAGACACAGATTCTACCTTACTTAGTCTCTCTTCTAATTGCTGTGACAAAACAAGATCTTTGGAGACGATATCTGACTGGAGATCAAGATCTAGAGAAAAGGGGGAGTTTTCTCAAAGCTCGAAAAGTAGCCTCGCTGATTATAGCAGTAGTTCAAGAATTAGTGGACAAAGCATTGGCAGTGGCTCTAGTCATTGTGGGAACAATCGGCCTCACATGTCGAAGGACTTGAGATGGGAAGCCATCCACCAAGTCCAGAATCAGCACAAAATCCTGGGCTTGAGCGACTTCAAGATGCTCAGAAAGCTTGGACTTGGGGACATTGGGACTGTGTATCTTGCTGAGCTAATCGATACAAACTGTCTATTTGCATTGAAAGTGATGGACAAGGACTTGTTGAGCAACAGGAAGAAAATGCTAAGGGCACAGACTGAGAAAGAGATACTGCATATGCTTGACCATCCCTTTCTTCCCACGCTGTATACTCACTTTGAAACTGATAACTTTATGTACCTGGTCATTGACTACTGTCGAGGGGGAGATCTGCATGTGCTACGGCAAAAGCAACCAAGCAGGAATTTCTCTGAGCGAGCAGTCAGGATGTTCACTTGGCTAGCTGCTGACAGTAGATTAACCAGAGCCTTTTCAATTTTGTTTTACGGGGCCGAGGTTCTTCTTGCCCTGGAGTACTTACACATGCTAGGAGTCGTTTATCGAGACTTGAAGCCAGAAAATATACTGATCCGAGAAGATGGTCACATTATGCTTACAGACTTTGACTTATCACTCAGATGCGCGGTCAATACAAAGGTGCTTAAATCGTCCTCTCCTGTCGCGGGGACTACGAAGAAGGTCTTAGGTCCATGCGATGAAAATGGATGCATTCACCCATTATGCCTTCACCCATCTTGGGAAGTCCCTTGCTTCACTCCTAAACATCTTTCTGCCCCATCAAAATCTCGAAAGATCAAATCCGACCCTGTCGGCCAGGTAAACCCATTACCGCAACTTGTAGTAGAGCCAATCAGTGCTCGCTCAAACTCTTTTGTGGGAACCCATGAATACCTTGCTCCAGAAATAGTCAAGGCCGAGGGTCATGGCAATGCTGTTGATTGGTGGACGTATGGGGTTTTTCTCTTTGAATTACTCTATGGGAAGACACCCTTCAAGGGTTCATCAAATGAGAACACTTTAACCAACATAGCCTCACAGAATCTTGCATTCCCAGACATTCCCATCGTCAGTTTTCAGGCCAGAGATTTGATAAGAGGTTTACTGATAAAGGAGCCTGAAAATCGGTTCGGATCAGCTAAAGGGGCGGCAGAGATCAAGCAGCACCCTTTTTTCGACGGCCTGAATTGGGCTCTGATACGATCCACTGCCCCGCCAGAATCGAGCAGATTTTCCGATGTAGTGATAGGGGCAGGTTTGATTGATTCATCAAAAAAGAAAAGCCCAAAGCCTGAAGTGCATGAGAATACAGGTGAGGAGGCTGTGGAGTTTGAGCTGTTTTAG 2967 44.29 MKVVAAYLLAVLGGNTSPSVKDLKHILGSVGAEADEDKIEFLLSEVKGKDITELIASGREKLASVPAGGGGAVAYSAPGGGGGGGAAAPAAEEQKKEEKVEEKEESDDGRYVTWFLIFVLCILNKVSEMVLEELDPVLRSNNESANNHYSDARKRYSIEDDINRLFQAFDNKNSGRSSGQAHVVGRNTWQKSALKRPIGVGSLNVSSIGISEPVSLKQALRGLCISQAAEMAAMKRLSRPAQSLGVSEAVTIKRLYRAVVVEASGSGASLNEAKGKLVEVSIMPERIASKFSNEVSESGQKSKTELVNPSVCSFTSSVDPVMEEIVGSELSLEDSIGCGILKEEVGKQQYAESSSNDRTASDEISSSLTVFSSKSSMQGKKMGVCNSEPSHSSSAGGAKLSKPYGNGPSLIKPIFQAKNFVKKKAKLELTSFSIISNKIAANAENDKVPKTCEIEKQMNVCASTHERKENEKASNVSSGVKQGTVDTDSTLLSLSSNCCDKTRSLETISDWRSRSREKGEFSQSSKSSLADYSSSSRISGQSIGSGSSHCGNNRPHMSKDLRWEAIHQVQNQHKILGLSDFKMLRKLGLGDIGTVYLAELIDTNCLFALKVMDKDLLSNRKKMLRAQTEKEILHMLDHPFLPTLYTHFETDNFMYLVIDYCRGGDLHVLRQKQPSRNFSERAVRMFTWLAADSRLTRAFSILFYGAEVLLALEYLHMLGVVYRDLKPENILIREDGHIMLTDFDLSLRCAVNTKVLKSSSPVAGTTKKVLGPCDENGCIHPLCLHPSWEVPCFTPKHLSAPSKSRKIKSDPVGQVNPLPQLVVEPISARSNSFVGTHEYLAPEIVKAEGHGNAVDWWTYGVFLFELLYGKTPFKGSSNENTLTNIASQNLAFPDIPIVSFQARDLIRGLLIKEPENRFGSAKGAAEIKQHPFFDGLNWALIRSTAPPESSRFSDVVIGAGLIDSSKKKSPKPEVHENTGEEAVEFELF 988
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 324683 331516 - BLOR20208 Blo08g00038 63990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00038 988 Gene3D - 1 58 IPR038716 -
Blo08g00038 988 Gene3D Phosphorylase Kinase; domain 1 571 690 - -
Blo08g00038 988 PANTHER FLIPPASE KINASE 1-RELATED 135 988 - -
Blo08g00038 988 Gene3D Transferase(Phosphotransferase) domain 1 691 776 - -
Blo08g00038 988 CDD STKc_phototropin_like 579 948 - -
Blo08g00038 988 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Blo08g00038 988 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 135 988 - -
Blo08g00038 988 Gene3D Transferase(Phosphotransferase) domain 1 828 944 - -
Blo08g00038 988 MobiDBLite consensus disorder prediction 522 554 - -
Blo08g00038 988 Pfam Protein kinase domain 582 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00038 988 Pfam Protein kinase domain 830 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00038 988 CDD Ribosomal_P2 1 72 IPR044076 GO:0002182|GO:0003735|GO:0022625
Blo08g00038 988 MobiDBLite consensus disorder prediction 379 401 - -
Blo08g00038 988 Pfam 60s Acidic ribosomal protein 18 108 - -
Blo08g00038 988 SMART serkin_6 581 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00038 988 MobiDBLite consensus disorder prediction 82 104 - -
Blo08g00038 988 ProSiteProfiles Protein kinase domain profile. 581 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00038 988 MobiDBLite consensus disorder prediction 516 554 - -
Blo08g00038 988 Hamap 50S ribosomal protein L12 [rpl12]. 2 108 IPR027534 GO:0003735|GO:0005840|GO:0006414
Blo08g00038 988 MobiDBLite consensus disorder prediction 379 399 - -
Blo08g00038 988 SUPERFAMILY Protein kinase-like (PK-like) 561 948 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01202 Blo-Chr1:45013736 Blo08g00038 Blo-Chr8:324683 0 dispersed
Blo04g00355 Blo-Chr4:2826787 Blo08g00038 Blo-Chr8:324683 3.53E-31 dispersed
Blo08g00038 Blo-Chr8:324683 Blo01g00963 Blo-Chr1:25067406 3.14E-180 dispersed
Blo13g00684 Blo-Chr13:29585957 Blo08g00038 Blo-Chr8:324683 6.64E-29 dispersed
Blo13g00947 Blo-Chr13:31907480 Blo08g00038 Blo-Chr8:324683 1.17E-29 dispersed
Blo14g00222 Blo-Chr14:1936297 Blo08g00038 Blo-Chr8:324683 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84425 PF00069 Pkinase 3.60E-33 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00038 - - qsu:111996719 905.205