Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00044 ATGGCGAACCACAGAGTTGGAGAGACGGGTTTATCAGATTCTGGGCCTTCTTCAAATCACCATAGCTATCTCTCTTACGCTGTTCTTCAAGGAATACCTAATCATTCAACCGTTTCTTTCTTTCCTCAAGAAAGATCCAGTTTCGATTTTGGAGAGTTGGGAGAAGCCATGGTTCTACAAGGAGTTAACTTTCGAACTGATGAAGCCAAACCACGAAGGCCTGCAGCTACCCTAGAAATGTTCCCATCTTGGCCAATCAGATTCCATGGAACCCAAAGAGGAAGCGCTAAATCAGGAGAGAAAAGCACCGAATCAGGATCAGCTGTGAATTCTCTACACAGTAAAGCTGATGAGGCTCAGGTAGAACAAGCAGAAGCATCGATGAGTAGCAAGAAGGAATCGACTTCCGATCATAATCGTCTTCTTCAACCTGACGATCAATTAGTTTCCAAACTAACACAAGAAAAGGTTCTAAATGTACTAATGAGATACTTCGTTTATCTGCAAGGTGTTCTTCTCGGTGCTTGGGGTGCTGTCGGTGGGAGCATCAGCTCCGGAGCTGCAGTTTTTGACATGGAGTATGCGAGATGGCTAGAGGATGATCATGGACACATGGCGGAGTTACGGGCAGGCTTACACGCACACTTATCCGTCGGTGATCTTAGAATAGTAGTCGACGGCTATATTGCTCATTACGATGATCTTTTCCGGCTAAGAGAGGTGGCTTCTAAATCTGATGTCTTTCATCTCATTACCGGATTGTGGATGTCGCCAGCTGAACGGTGCTTCCTCTGGATAGGTGGTTTCCGGCCATCGGAGCTCATTAAGATGCTAATATCACACTTAGACCCAATAACTGAGCAGCAAGTGATGGGAATATGCAAGCTTCAGCACCACTCACTGCATGCGGAGGAGACCTTAACTCAAGGCTTAGAACAACTCCACCAGTCTCTGATCGACACCATCGCCGGCCGTCCAGTCATTGACGGGATGAATCAAATGGTAGTAGCGATGGGAAAGCTTGCCAATCTCGAAGGCTTCGTTTGCCAGGCTGATATGTTGAGACGGCAAACCTTTCATCAACTCCGGCGAATATTAACGATCCAACAAGCCGCACGATGTTTTCTTGTGATTGGCGAGTATTACAGCCAATTACGAGCCCTCAGTTCTCTTTGGTCGTGTCGAACCAGAGAGACGTTGATAAACGATGATATTTCCTGCCAAACATTAGCAGATCTACAGATGATTCAACCTCCACCGAATCACTTCTCAAACTTTTGA 1281 46.21 MANHRVGETGLSDSGPSSNHHSYLSYAVLQGIPNHSTVSFFPQERSSFDFGELGEAMVLQGVNFRTDEAKPRRPAATLEMFPSWPIRFHGTQRGSAKSGEKSTESGSAVNSLHSKADEAQVEQAEASMSSKKESTSDHNRLLQPDDQLVSKLTQEKVLNVLMRYFVYLQGVLLGAWGAVGGSISSGAAVFDMEYARWLEDDHGHMAELRAGLHAHLSVGDLRIVVDGYIAHYDDLFRLREVASKSDVFHLITGLWMSPAERCFLWIGGFRPSELIKMLISHLDPITEQQVMGICKLQHHSLHAEETLTQGLEQLHQSLIDTIAGRPVIDGMNQMVVAMGKLANLEGFVCQADMLRRQTFHQLRRILTIQQAARCFLVIGEYYSQLRALSSLWSCRTRETLINDDISCQTLADLQMIQPPPNHFSNF 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 391298 396569 - BLOR20214 Blo08g00044 63996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00044 426 MobiDBLite consensus disorder prediction 95 130 - -
Blo08g00044 426 Pfam Seed dormancy control 204 279 IPR025422 GO:0006351|GO:0043565
Blo08g00044 426 PANTHER TRANSCRIPTION FACTOR TGA9 53 408 - -
Blo08g00044 426 PANTHER TRANSCRIPTION FACTOR TGA2-LIKE ISOFORM X1 53 408 - -
Blo08g00044 426 MobiDBLite consensus disorder prediction 88 142 - -
Blo08g00044 426 ProSiteProfiles DOG1 domain profile. 187 395 IPR025422 GO:0006351|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01051 Blo08g00044 CCT
Blo08g00044 Blo14g00231 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00044 Blo-Chr8:391298 Blo09g00369 Blo-Chr9:14405255 3.94E-82 dispersed
Blo17g00081 Blo-Chr17:616058 Blo08g00044 Blo-Chr8:391298 7.80E-17 dispersed
Blo14g00231 Blo-Chr14:2035758 Blo08g00044 Blo-Chr8:391298 5.34E-143 transposed
Blo14g00230 Blo-Chr14:2034499 Blo08g00044 Blo-Chr8:391298 3.45E-83 wgd
Blo03g01051 Blo-Chr3:36835921 Blo08g00044 Blo-Chr8:391298 6.84E-106 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00044 K14431 - cpap:110817287 478.404