Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00098 ATGCAGCGAGTGAGACTGAAACCATTGTGGTGTTTTTTCCCTCTCTCTCGCCCCACCTCCTTTCGTCTCTTACCCTCAATTCTGAAACCCATCATTCAGTATCCAAATACTAAGCATTTCTTCGCAACTATCTCTCTGTCCTCCACTTTTCCTCTTGTAGCAGAGCCTTTGACGAAGAGCCTTTCTCATGTCGATCTTGACCCTTATCTTACATGCTCGATGCCCAACAAGAGGCTCAAGGTCGCCGTTCTACTTAGCGGAGGCGTCGATAGCAGCGTCGCTCTCCGCCTCCTTCATGCCGCCGGTCACTCCTGCACCGCTTTTTACCTCAAAATTTGGTTCCAGGAAGACTTTGAGAACTTTTGGTCCGAATGTCCTTGGGATGAAGACTTGAAGTATGCAAAAGCTGTTTGTAATCAGGCAAGTCGCTCTTGTTTTCTTTCCCTATTGGTTGATGTACCTTTAGAAGTTGTGCATTTGACAGATGAATACTGGAAGAATGTTGTGTCATACATCATTGAAGAGTATAGACATGGTCGTACTCCAAATCCAGATGTTCTCTGTAATACAAGAATAAAGTTTGGTGCCTTTATGGATGCTATCAGCAATATGGACTTTGATTACATTGCATCTGGACATTATGCAAATGTTATTCATCCATACGGGGATCAAATTAGCAATCTTTCGATTTTAGAGCTGTCAAAAGATATGGATTTTTCATGGTTTATGTTGAGGCACTACTTCTTTAGTGTCAAAGATCAAACATACTTTCTCTCACATCTGTCACAGAACCAGCTTCAACGACTCATTTTTCCTCTTGGTAGTATATCAAAAGATGAGGTTCGCAAGCTTGCCACCAAGTTTGATCTGCCTAACAAAGACAGAAAGGATTCACAAGGAATATGCTTCCTTGGAAAGATTAAATTCAGTGAATTTGTTGCAAGGCACATTGGGGAAAGAGAAGGAGTCATATTGGAAGCCGAGTCAGGAGATTTCCTTGGTAAACATCGTGGGTTCTGGTTCCACACAATAGGTCAACGTCAAGGTTTACGACTCCCTGGAGGACCTTGGTATGTCGTGGAGAAAGATGTGAAGTACAATGTTGTATTCGTGTCGAGAAATTATTTCTCATTCGATAAAAGAAGACGGCATTTCCGTGTTGGTTCATTGAAATGGATTAGCGGCTCTCCTCCAAGCCAGTATAATGGGATCCAATGCAAGGTGAGACATGGCCCGGGATTTTACACCTGCCGTTTTAAAATGGAACACAATGAAGAAAGTGGCGAAGATGTGGCAGTAGTGGAGTTATCAGAAGACGATCAAGGGTTGGCAGCCGGGCAATTTGCAGCTTTTTATACAGGAAGGACGTGCATGGGCTCGGGTGTGATTATGGAGTCTTGGGATGATGAGGGTTTTCCTGTTTGTGCAAAGGCTCTTGAAGTTGCAGGAATGGAAGATAAGTCAGAACTCGGAAAACCCATCAAGATCAAAGCTAAACCAGAAACCGATCGAAACGGTGCTGAAGGCAGAGATCAGGAAAAGGTACGTAAATGTTCGGGTAATTTTCAAATTTCTGATCGAAGTGGAGACGGGGAGGTGGCCAATAAGGTTGGTGTAGTTTCCTTGCGTACTTTGAATTGGCTCCAAAAAGGCAGAAGCGATAAACTGCCATCCTCCGCGCTGCCTAACAGCCAAATTGTTCAGGCGCCGTCCATGGCAGCTCTGAAGCTCTTCCACGCTTCCACATTTACTTTCAGCACTTCCCCCAGGACCTTGATTTCTTCTTCCTCACTGCCTGCTTCTTCCTGTTCACCTTTTCTACCTGCGCAGTCGCCATGGATTCTCGCCACTTTCCCTCATAAATTAGTCTCCTACTCTTTCCGGGAGCTCTGTCAATGCGTTTCTAGGTTAGAAGAGGCTGATTTATCTGCTAATTATGAGAATGACGACGAAGAGGAAATGGATGACTTGTACGAAGATAAAGGGGAGGATTCCAACGAATACGACGGTGAAGATTACTCCATTGACGTGGACCTGATGGAACAAGAAGCTCAAGACGCTGTTCGAGAGTATTCTAGCTCTTTATCTCGCGAACTAAGAATCGAAGATGAGAAGAATAATGAATTTGAAACCGGCCGAAAGCAGAAGAGGCGTCAGAAAAGTACTGCAAAAATCCCAGACCATCTACTTCCAAAGGTTTCAATTGTTGGAAGGCCAAATGTTGGTAAATCTGCATTGTTTAATCGTCTTGTTGGGGGGAATAGAGCAATTGTGGTGGATGAACCAGGGGTTACTAGGGATCGCTTGTATGGCAGAGCCTTTTGGGGAGATTACGAGTTTATGGTGGTAGATACAGGAGGTGTTATCAATATTTCTAAATCACAAGATACTGTTATGGAAGAACTTGCTATATCAACTACCATTGGCATGGATGGAATTCCTCTTTCTGCCAGAGAGACAGCTGTTGCAAGGATGCCCTCCATGATTGAGAGGCAAGCTACAGCTGCTGTGGAAGAATCATCGGTTATTATATTCCTTGTTGATGGCCAGGCTGGTCTAACAGCAGCTGATGAGGAAATTGCTGATTGGCTTCGTAGGAACTACTCAAATAAGCATGTTATTCTTGCAGTTAATAAGTGTGAGTCTCCGCGTAAAGGAATAATGCAAGCATCTGACTTTTGGTCATTGGGGTTTACACCCCTTCCAATATCGGCAATATCTGGATCTGGTACTGGAGAGCTTCTGGATCTTCTTTGTTCATCATTGCAAAAAATTGAGGATCCTGGAGATCTTGGTGAAGGAGAAGATTACATCCCTGCCATTGCAATTGTTGGCCGACCTAATGTTGGTAAGAGCAGTATTTTGAATGCTTTAGTTGGAGAAGACCGAACAATTGTAAGCCCTATCAGTGGTACAACACGCGATGCAATTGATACTGAATTTGTTGCCCCAGATGGCCAGAAATTCAGGCTTATTGATACCGCTGGAATTAGAAGAAGGGCAGCTATAGCTTCATTGGGTAGTAAGACAGAGGCACTATCTGTGAATCGAGCATTTCGTGCTGTCTGCCGATCCGATGTCGTGGCCCTCGTAATTGAAGCACTGGCTTGTGTTACTGAGCAGGATTGCAGGATTGCTGAAAGGATAGAAAGGGAAGGGAAGGGTTGCTTGATAGTCGTAAATAAATGGGATACAGTGCCAAATAAAAACCAACAAACTGCAACCTACTATGAACAAGATGTGAGAGAAAAATTGCGTACTCTTAGTTGGGCACCTATCGTGTACTCAACTGCAATTGGAGATAACAGTGTTGAAAAAATAATTGTTGCTGCAAGTGCAGTCGAGAAGGAAAGATCAAGAAGACTTACTACTGCCATACTTAATCAAGTGGTACATGAGGCAATAGCTTTTAAGTCACCTCCAAGGACCAAGGGTGGGAAGAGAGGACGTGTATATTACTGTACTCAGGCTGCCATAAGACCACCCACATTTGTTTTCTTTGTTAATGATGCAAAACTTTTCCCTGAGACCTATCGGAGGTATATGGAGAAACAACTGCGTACTGATGCTGGTTTTTCTGGCACACCTATTCGGCTTCTATGGCGGAGCAGAAGAAAGATGGAAAAAGATGAAGGTAGGAACACTGATCAAGTCCATAAACTATGCCTTGAATTCTCTGAAACGATGGATGAGAGGCAAAAAGGACTGTCTTTGGAACCAGTTATAGGAGCCTTAGCTGCTGGAAACTGTGCTGTTCTGAAACCTTCAGAGTTAGCCCCTGCTTCTTCAACTCTTCTGGCCAACGCCATTTCCTCTTATTTAGACATCAAAGCCGTCAAGGTTATTCAGGGCGGCCCCGAGGTCGGTGAGCGCCTTTTGCAGGAAAAATGGGACAAAATTTTCTTTACTGGGAGCCCTCGAGTTGGCCGATTAGTGATATCGGCTGCTGCAAAGCATCTAACTCCGGTGACTCTCGAGCTGGGCGGAAAATGTCCAGCTATTTTGGATTCTCTTTCAAGTTCTTGGGACATTAAGGCGGCTATCAGTCGAATTGTCGTCGGGAAATTCGGAACCTGTGCCGGTCAAGCTTGTATTGGAATTGATTACATGTTGGTAGAAAACAAGTTCATTCCCAACTTGTTGAAAACAATGAAGACGATTATCAAGAAAATGTACGGAGAAGATTCGAAACGATCGAATAGCATGGCGAGGATTGTGAACAAAGAGCACTTCTTGAGATTGAAAAATCTGATGAGCCAGCCAATGGTCGGAGCTTCAATCGTCCATGGCGGTTTGATGGATGAAGATGAACGGTTTATCGAGCCTACGATCTTGTTAGATCCGCCACTTGATTCCGACATCATGCGAGACGAGATCTTCGGCCCTCTACTTCCGATCATCGGTTTGGAGAAGTTGGAAGAAAGCATAGACTTCATAAATTCAAGGCCTAAACCTCTTGCCATCTATGCATTCACAAAAGATGCAGCTTTTCAGAACAGACTGGCTTCTGAAACTTCGTCAGGAAGCTTGATCTTCAATGACGCCATTATTCAATATGCAGCCGATACACTTCCCTTCGGAGGAGTTGGAGGGAGCGGGATTGGGAGGTATCATGGAAAGTTCTCATTCGAGACGTTTAGCCATGAGAAGGTGGTGGCCAGAAGGAGCTTTCTGACTGACTTTTGGTTCAGATATCCACCATGGACTAATTACAAGCTCCAGCTGCTTAAAGATGGCTACAATTATGACTATCTGTCCATGCTTCTTGTCATTACTGGATTAAGGAGGACTTAA 4794 44.18 MQRVRLKPLWCFFPLSRPTSFRLLPSILKPIIQYPNTKHFFATISLSSTFPLVAEPLTKSLSHVDLDPYLTCSMPNKRLKVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWDEDLKYAKAVCNQASRSCFLSLLVDVPLEVVHLTDEYWKNVVSYIIEEYRHGRTPNPDVLCNTRIKFGAFMDAISNMDFDYIASGHYANVIHPYGDQISNLSILELSKDMDFSWFMLRHYFFSVKDQTYFLSHLSQNQLQRLIFPLGSISKDEVRKLATKFDLPNKDRKDSQGICFLGKIKFSEFVARHIGEREGVILEAESGDFLGKHRGFWFHTIGQRQGLRLPGGPWYVVEKDVKYNVVFVSRNYFSFDKRRRHFRVGSLKWISGSPPSQYNGIQCKVRHGPGFYTCRFKMEHNEESGEDVAVVELSEDDQGLAAGQFAAFYTGRTCMGSGVIMESWDDEGFPVCAKALEVAGMEDKSELGKPIKIKAKPETDRNGAEGRDQEKVRKCSGNFQISDRSGDGEVANKVGVVSLRTLNWLQKGRSDKLPSSALPNSQIVQAPSMAALKLFHASTFTFSTSPRTLISSSSLPASSCSPFLPAQSPWILATFPHKLVSYSFRELCQCVSRLEEADLSANYENDDEEEMDDLYEDKGEDSNEYDGEDYSIDVDLMEQEAQDAVREYSSSLSRELRIEDEKNNEFETGRKQKRRQKSTAKIPDHLLPKVSIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRAFWGDYEFMVVDTGGVINISKSQDTVMEELAISTTIGMDGIPLSARETAVARMPSMIERQATAAVEESSVIIFLVDGQAGLTAADEEIADWLRRNYSNKHVILAVNKCESPRKGIMQASDFWSLGFTPLPISAISGSGTGELLDLLCSSLQKIEDPGDLGEGEDYIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFVAPDGQKFRLIDTAGIRRRAAIASLGSKTEALSVNRAFRAVCRSDVVALVIEALACVTEQDCRIAERIEREGKGCLIVVNKWDTVPNKNQQTATYYEQDVREKLRTLSWAPIVYSTAIGDNSVEKIIVAASAVEKERSRRLTTAILNQVVHEAIAFKSPPRTKGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRYMEKQLRTDAGFSGTPIRLLWRSRRKMEKDEGRNTDQVHKLCLEFSETMDERQKGLSLEPVIGALAAGNCAVLKPSELAPASSTLLANAISSYLDIKAVKVIQGGPEVGERLLQEKWDKIFFTGSPRVGRLVISAAAKHLTPVTLELGGKCPAILDSLSSSWDIKAAISRIVVGKFGTCAGQACIGIDYMLVENKFIPNLLKTMKTIIKKMYGEDSKRSNSMARIVNKEHFLRLKNLMSQPMVGASIVHGGLMDEDERFIEPTILLDPPLDSDIMRDEIFGPLLPIIGLEKLEESIDFINSRPKPLAIYAFTKDAAFQNRLASETSSGSLIFNDAIIQYAADTLPFGGVGGSGIGRYHGKFSFETFSHEKVVARRSFLTDFWFRYPPWTNYKLQLLKDGYNYDYLSMLLVITGLRRT 1597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1007086 1028960 - BLOR20268 Blo08g00098 64050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00098 1597 Gene3D - 935 1119 IPR027417 -
Blo08g00098 1597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 900 1208 IPR027417 -
Blo08g00098 1597 Pfam tRNA methyl transferase HUP domain 80 306 - -
Blo08g00098 1597 CDD EngA2 941 1114 - -
Blo08g00098 1597 Gene3D - 729 928 IPR027417 -
Blo08g00098 1597 SUPERFAMILY ALDH-like 1239 1569 IPR016161 GO:0016491
Blo08g00098 1597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 731 924 IPR027417 -
Blo08g00098 1597 TIGRFAM trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 80 463 IPR004506 GO:0008033|GO:0016740
Blo08g00098 1597 Gene3D - 316 375 IPR023382 GO:0016783
Blo08g00098 1597 Gene3D HUPs 69 315 IPR014729 -
Blo08g00098 1597 CDD tRNA_Me_trans 80 463 IPR004506 GO:0008033|GO:0016740
Blo08g00098 1597 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 1121 1202 IPR032859 -
Blo08g00098 1597 Pfam 50S ribosome-binding GTPase 941 1062 IPR006073 GO:0005525
Blo08g00098 1597 Pfam 50S ribosome-binding GTPase 732 879 IPR006073 GO:0005525
Blo08g00098 1597 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1329 1532 IPR016163 GO:0016620
Blo08g00098 1597 Gene3D - 1121 1205 IPR015946 -
Blo08g00098 1597 Pfam tRNA methyl transferase PRC-barrel domain 311 373 IPR046884 -
Blo08g00098 1597 CDD EngA1 735 922 - -
Blo08g00098 1597 PRINTS GTP1/OBG GTP-binding protein family signature 830 848 IPR006073 GO:0005525
Blo08g00098 1597 PRINTS GTP1/OBG GTP-binding protein family signature 733 753 IPR006073 GO:0005525
Blo08g00098 1597 Hamap GTPase Der [der]. 730 1205 IPR016484 GO:0005525
Blo08g00098 1597 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 731 926 IPR031166 GO:0005525
Blo08g00098 1597 MobiDBLite consensus disorder prediction 644 669 - -
Blo08g00098 1597 Pfam Aminomethyltransferase beta-barrel domain 383 463 IPR046885 -
Blo08g00098 1597 TIGRFAM small_GTP: small GTP-binding protein domain 937 1099 IPR005225 GO:0005525
Blo08g00098 1597 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1236 1550 IPR016162 GO:0016491
Blo08g00098 1597 PANTHER - 60 496 - -
Blo08g00098 1597 Gene3D Translation factors 381 471 - -
Blo08g00098 1597 Pfam Aldehyde dehydrogenase family 1239 1552 IPR015590 GO:0016491
Blo08g00098 1597 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 80 348 - -
Blo08g00098 1597 Hamap tRNA-specific 2-thiouridylase MnmA [mnmA]. 79 464 IPR004506 GO:0008033|GO:0016740
Blo08g00098 1597 TIGRFAM GTPase_EngA: ribosome-associated GTPase EngA 824 1201 IPR016484 GO:0005525
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00953 Blo-Chr2:36958175 Blo08g00098 Blo-Chr8:1007086 1.29E-59 dispersed
Blo08g00098 Blo-Chr8:1007086 Blo16g00062 Blo-Chr16:1967721 3.61E-144 dispersed
Blo17g00205 Blo-Chr17:2063382 Blo08g00098 Blo-Chr8:1007086 1.35E-09 dispersed
Blo08g00098 Blo-Chr8:1007086 Blo01g00398 Blo-Chr1:4515469 2.54E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00098 - - csv:101205027 942.184