Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00137 ATGGAGGAAAATGATCGAAGGAGCATCCGGCGATGGTTGACGTCCTTCTACTTACACTTCCCAGCAATTAAGAGGGCTCTTCCTTCTTTCTTCACCCGCCATCATAATTTATGGACGACGGATGGTCTGAATTTCAAAGCAAAATCAACCACAAAAACGATGGTGGTTTTCCGACAATCACGAACCAGTTTCTCTCTCCTCTCGCCTCAAGTGCCTTTTTATAGCAGCACCATTCCTCGAAGGAGATTTCATTCAAACAAAGAAGAAGAGGAACAGGAAGAAGAACAAGAAGAAGAAATGGGACGAAAAGAAGCGATATGCTGTGCAGTTGCTTTAGCTGCAGTTTTTCTTTCTGCCACTCAGGTTGTGGAGTCGATGACGACGACAATTCCGTCAGACGCATCGGCAGTAGAAAGCTGGTTTTCCCAAAACGTGAAACCGTACAAAGATCGAAGCTCGGAAATCGATCCTGCACTCTCGGCGGCGGAAGAGGGAGCAAAAGTGGTGAAGGTGGGAAAAGATGGAAGCGGAGATTTCAAGACAATCACCGACGCGATCAAGAGTATTCCATCTGGGAATAAGAATCGAGTGATTATTTCGATCGGAGGTGGAGTTTACACCGAGAAAATTAAGATCGATCGAACAAAACCTTTCATCACTTTTTATGGCTCTCCCCAGAATATGCCGACTTTGACATATTCCGGCACCGCTGCTGCTTACGGAACCGTAGACAGCGCCTCTGTGATCGTTGAGTCAGACTACTTCATGGCTGTCAATATCATCTTTGCGAATTCTTCTCCGAGGCCAAATGGGAAGAAAATGGGAGAGCAGGCGGTAGCACTGAGGATCTCCGGCGATAAGGCGGCGTTTTACAACTGTAAAATGGTTGGATATCAAGACACCGTTTGCGACGATAGAGGCAGACATTTCTTCAAGAACTGTCAGATCACCGGAACTGTAGACTTCATTTTCGGAAGTGGCCAATCACTCTATCTGAACACACATTTATTCGTCGACGTGAAGGACGAAGGATTCACGATAATTACGGCCAACGCGAGGGAAGCAGAATCCGACAAGTCTGGATATTCATTCGTGCATGGGAAGGTAGATGGAAGTGGGACGAACAACGCATTCTTAGGACGAGCGTGGAAATCCAGACCGAAGGTTGTCTTCGCCTACACAGACATGTCGGCCGTCGTCAGCTCCGCCGGCTGGAGCCTCAACTTCCGGCCCGAAACTGAAAAGACTGTGTATTTTGGAGAGTACCAGTGCACGGGTGCAGGTGCCAAATCTGACCTCAGAGCCTCGTTCACCAAGAAGTTGACAAGCGCGGAAGTCAAACCCTTTGTCACTTTGGACTACGTGGACGCTTCCAGTTGGCTGCTTCCACCCCCTCACCTCTAA 1404 48.22 MEENDRRSIRRWLTSFYLHFPAIKRALPSFFTRHHNLWTTDGLNFKAKSTTKTMVVFRQSRTSFSLLSPQVPFYSSTIPRRRFHSNKEEEEQEEEQEEEMGRKEAICCAVALAAVFLSATQVVESMTTTIPSDASAVESWFSQNVKPYKDRSSEIDPALSAAEEGAKVVKVGKDGSGDFKTITDAIKSIPSGNKNRVIISIGGGVYTEKIKIDRTKPFITFYGSPQNMPTLTYSGTAAAYGTVDSASVIVESDYFMAVNIIFANSSPRPNGKKMGEQAVALRISGDKAAFYNCKMVGYQDTVCDDRGRHFFKNCQITGTVDFIFGSGQSLYLNTHLFVDVKDEGFTIITANAREAESDKSGYSFVHGKVDGSGTNNAFLGRAWKSRPKVVFAYTDMSAVVSSAGWSLNFRPETEKTVYFGEYQCTGAGAKSDLRASFTKKLTSAEVKPFVTLDYVDASSWLLPPPHL 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1448089 1449779 + BLOR20307 Blo08g00137 64089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00137 467 ProSitePatterns Pectinesterase signature 2. 316 325 IPR033131 -
Blo08g00137 467 PANTHER PECTINESTERASE 63-RELATED 134 462 - -
Blo08g00137 467 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 134 462 - -
Blo08g00137 467 Coils Coil 80 106 - -
Blo08g00137 467 SUPERFAMILY Pectin lyase-like 166 461 IPR011050 -
Blo08g00137 467 Pfam Pectinesterase 169 456 IPR000070 GO:0030599|GO:0042545
Blo08g00137 467 Gene3D - 163 463 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00245 Blo-Chr5:2743288 Blo08g00137 Blo-Chr8:1448089 7.68E-84 dispersed
Blo08g00137 Blo-Chr8:1448089 Blo14g00522 Blo-Chr14:7391923 6.86E-74 dispersed
Blo10g00007 Blo-Chr10:101585 Blo08g00137 Blo-Chr8:1448089 5.90E-16 transposed
Blo14g00302 Blo-Chr14:3099242 Blo08g00137 Blo-Chr8:1448089 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00137 K01051 - cit:102610921 460.299