Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00138 ATGGCGTCGTCTCCTGCTCAGCCGCCGGTTTCAGGGAATACCAGAGATCTTCACGGTGCAAAGAGCAATGTATTGGCTAATAAGACCGGTGCATTGGTCTTTAACGAAAGAACAACCTCTGATATTCAAACTTCATCTCGACAAAAGAAAAGAAGAATCTCTTTGAACGATAATGGCTCATCATGTGAGCCTTTGGGACAGCTTGGGGACGTTTTACCTATGTTACAGTCATCTGATTATTTTATGTTTCCAAGCTTGAAGGACTTGTACGACCAGAGTCGGGTAGACCCTGGCTCTATTACTCGCGTTTCAGATTTCACAATTGGAAGGTTTGGTTATGGATCCATCAAGTATTTTGGTAATACTGATGTTAGATGGTTAGATATCGACAGAATTGTCAATTTTCATAGGCATGAAGTTATTGTGTATGAGGATGAAAGTTCCAAGCCTGAGGTTGGCCAAGGCCTGAACAAAGACGCTGAAGTAACTCTGCATCTACAATTAAAATTAAAAAATTTTGGAGAGGCACAAATCAGTAATTTAAGAAAGAAATTGAGGAAGATCACTGAGAGACAGGGAGCTCACTTTATTTCCTTTGATGCAAAAAATTGCGAGTGGAAATTCTCTGTCAATCATTTCAGCAGATTTGGATTAAGTGAAGACGATGAAGATGATATAGTAATGGATGATGCAAATGCAGATCCAAATCCTGTGGATATTTATAGTGGAGAGATAGTACGTATTGATGAAGACACAAAAATGAGTCCCACTGGACCTTTGCTTTGCCATTCCCTGCCTGCTCATCTTGGACTTGATCCATTGAAGATGAAAGAACTGAAAATGCTAATGTTTCCTGAAGAGGAAGATATGATTGAAGTTTCCAATAAAGTTTCTAAAAATCAGAAACCATCATTTGGTACAGAGCATTCGCGACTTCCCTTACCAAGTTCCAGCCATAAAATTACCTATAGGTCCAGTCCACCTGCAGTAAGGAAAACCCCATTAGCCCTGATTGAGTACAACCATGGTAGTCTGGATTCAACTTCTTCAGGTGGCATTCTGATGTCCCAACAAAATAAGGGCATCCATCTCAATGCTGGTAAAGCAGAAGGATTTAAGCTGGATCTCAAGAATGAAACCCCAGTAGCCGTTCATCATTCACGGAACATTGTTGATGCAGGTTTGTTTATGGGGAGGTCATTTCGCGTAGGATGGGGTCCTAATGGTGTCCTTGTTCATACTGGTAATCCAGTGAACAATGTTGGTTCTCAGAGGGTCTTATCGTCTATAGTTAATTTGGAAAAGGTTGCTTTTGACAAAGTGGTCAGAGATGAAAATAACAAAGTGAAAGAGGAACTTGTTGACTGTTCTTTTGATTCTCTGTTAGGTCTCCATCAAATGATGAATCATGAAATTAGAGAAATGGAGGTTGGATCTTTCAAATTGAAACTTCAGAAGGTTGTCTCCAATCGCATAATGCTTTCGGAGATTTGTAGGAGCTATATAGATATCGTTGAGAGGCAGCTTGAGGTTCCTGGATTACCTTTTGATGTTCGTTTGGTCTTGACACACCAAATAATGGTCTGGGAGTTGATAAAAGTTCTCTTTGCCGACGGGGAAAATGTTGGAAAATTGAGATCTTTGGGTGATGACAATGAGGAAGATATGATGCAAGATGTGAAGGAAGGTTCTCCACAATTTGACTCAGAAGCACTTTCTCTTATACGAAGGGCGGAATTCAGTTGTTGGTTGCAAGAGAGTGTTTTCCCCAGTTTACAAGATGAGATAAGTTCACTAAATGAATCTAACTATTTGGAACATATATTTCTATTGCTTACCGGACGCCAACTTGATGCAGCTGTAGAATTGGCTGCTTCTAAGGGAGATGTAAGGCTTGCTTGTTTGCTAAGTCAAGCTGGTGGATCCACTGTGAATAGGTCTGATGTTGCACTTCAACTTAATCTTTGGCGAAGGAATGGAATGGATTTTAGATTCATTGAGGAGGAAAGAGTACGACTTTATGAGTTGTTGGGTGGTAATATTCACAAGGCTCTGCACGGTATCAGTATTGATTGGAAAAGATTCCTTGGGTTATTGATGTGGTACGAACTACCACCTGACACTCCATTACCCGAAATTTTTCAGACATATCAACACCTGCTAGAAAGTGGAAGGGCTCCATATCCTTTCCCACATTATGCATATGAAGAAGAGGCTGTGAACTGTGATACCAAGGATTATTTTGATATGTCATATTTTCTCTTGCTGTTACATGCCAAAGAACGTACTGATTTTATATCCTTGAAGTCCATGTTCAGTTCTTTCTCATCAACTCATGATCGGCTTGATTACCATATGATTTGGCATCAGCGTACTGTGTTGGAAGCTGTTGGTGTAATTGCTAGTCGAGATCTTCACATTCTTGATATGGGGCTTGTTTCTCAGCTCCTGTGTTTGGGGAAATCTCATTTGGCCATTTATGTGGTCCTGCACATGCCTTTTCTAGAAAGTTATCCCTATCTCCATGCTAAAGTTATTAAGGAAATCTTGTTCCAATATTGTGAATCGTGGAGTGGAGAAGAATCACAAATTCAATTTATTGAGAATCTGGGTGTTCCCCGGGTGTGGCTTTGTGAGGCTATGGCAGTTTATTACAGTTACTGTGGGGATCTTCTACAGTCTCTTAAATATTTCATTGAATGTAGACATTGGCAAAAAGCTCATACTATTTTTATGACTTCAGTTGCTCACATATTGTTCTTGTCAGCCCAACATGCAGAGATTTGGCAGTTTGCTATTTCCATGGAGGACTACAAGTCCGAGATAGAGAATTGGGATTTGGGTGCTGGTATTTTTATTTCATTTTATTCGCTGAGGAGTACATTGCAAGAAAACAACAATACCACGAGTGAATTGGATTCTCTTGAAAGCAGAAATGCTGCATGTGCAGACTTTCTTAGTCAGTTAAATGTCTCTTTGGCAGTTTGGGGTGGCAGATTACCTGTCGATACCAGCACCTCTCAGCAAGAAGAAGAAGACGAAGACGAAGAAGAAGATAAGAAAATGGCTTCCCGAGCTGTTGTTCCTCGGCAACAGCCACAAACAAAAGGTGCAGTTAGGCAGAAAATGGCAGCTGAAGAAAGAACTAGGCGAGTTCTTCGAGATATTGGTAATCTAGCGATCGATCGCCCTGTGGAAGGAAAGCCCCTTCCTCATATTCCTCAACCAGCTACAAGGAAATGCTCCCAATTATTGACCAGTGAACAGGCAGCAGCGGGAAAGAACAGGAAAGAAGCCTCGCAAATAGTTGATCGAGTTCGCCCCGGAAAAGGAGGTGGAATCAAAGATGTAGCAGCTCAAAAGAACGAATTGGAGAAGCCTAAGAGTGAAGAGGTGGTAGAGTTGAGCCCTGTTGCAGATAAAAATCTCAAAAACAACATAAAATCACTGGATGAAAGCAAAACAAGACGGAAGAATGTGAAGACCCTCAGTTCTATACTTAGTGCCCGTAGCAAGGCTGCCTGTGAATTCGGCAACAAGAGGGTAGAGCCAATAGTGAACATTGATGAAGTAGATGCTGATAATGAATTGGCTGTAGTTGAATACATTGATGATATGCATAAGTTTTACAAGCTGACAGAGGATGAGAATAGAGTGAATGACTATATGGGTTCACAGAGAGACATAAATGTTAAAATGAGATCAATTCTAATAGACTGGTTAATCGAAGTTCATCGTAAATTTGAGCTCACCCCAGAAACCCTTTACTTGACTGTGCATGTTGTTGATAGATTTCTCTCCATCACGGCAGTTCAAAGGAAAGAACTTCAGTTAGTTGGCCTAAGCTCCATGCTCTTAGCCTGCAAGTATGAAGAAATCTGGGCTCCTGAGGTTAATGATTTTGTAAGCATATCAGCTAATGCTTATGTGAGAGAACAAATTCTGGTAATGGAGAAAGCAATTCTTGGAAAGCTTCAATGGCGTTTAACAGTTCCAACTCCTTACGTTTTCCTCGTTCGGTACATTAAAGCTTCAGAATCATCCGATAAGGAGATGGAAAACATGGTGTATTTTCTTGCTGAACTTGGCTTAATGCACTATCCCACGACGGTTTCTCATCGCCCTTCCATGGTTGCCGCTTCAGCTGTTTATGCCGCAAGATGTACACTTGACAAACGCCCTTCTTGGACTGCAACTCTAGAACACCACACCGGCTATTTCGAAGACCAGCTAATCGATTGCGCCAAAATCTTGGTCGGCTTGCATTTGGGAGCGGCGGAGAACAAGCTCAAGGCAGTGTATCGGAAGTTCAACAGCCCTGATCGCTGTGCAGTTGCTCTTCTTCGTCCTGCAGCGAAGTTGCGTGGAAATTCTTTGGATTTCCACTGA 4389 41.42 MASSPAQPPVSGNTRDLHGAKSNVLANKTGALVFNERTTSDIQTSSRQKKRRISLNDNGSSCEPLGQLGDVLPMLQSSDYFMFPSLKDLYDQSRVDPGSITRVSDFTIGRFGYGSIKYFGNTDVRWLDIDRIVNFHRHEVIVYEDESSKPEVGQGLNKDAEVTLHLQLKLKNFGEAQISNLRKKLRKITERQGAHFISFDAKNCEWKFSVNHFSRFGLSEDDEDDIVMDDANADPNPVDIYSGEIVRIDEDTKMSPTGPLLCHSLPAHLGLDPLKMKELKMLMFPEEEDMIEVSNKVSKNQKPSFGTEHSRLPLPSSSHKITYRSSPPAVRKTPLALIEYNHGSLDSTSSGGILMSQQNKGIHLNAGKAEGFKLDLKNETPVAVHHSRNIVDAGLFMGRSFRVGWGPNGVLVHTGNPVNNVGSQRVLSSIVNLEKVAFDKVVRDENNKVKEELVDCSFDSLLGLHQMMNHEIREMEVGSFKLKLQKVVSNRIMLSEICRSYIDIVERQLEVPGLPFDVRLVLTHQIMVWELIKVLFADGENVGKLRSLGDDNEEDMMQDVKEGSPQFDSEALSLIRRAEFSCWLQESVFPSLQDEISSLNESNYLEHIFLLLTGRQLDAAVELAASKGDVRLACLLSQAGGSTVNRSDVALQLNLWRRNGMDFRFIEEERVRLYELLGGNIHKALHGISIDWKRFLGLLMWYELPPDTPLPEIFQTYQHLLESGRAPYPFPHYAYEEEAVNCDTKDYFDMSYFLLLLHAKERTDFISLKSMFSSFSSTHDRLDYHMIWHQRTVLEAVGVIASRDLHILDMGLVSQLLCLGKSHLAIYVVLHMPFLESYPYLHAKVIKEILFQYCESWSGEESQIQFIENLGVPRVWLCEAMAVYYSYCGDLLQSLKYFIECRHWQKAHTIFMTSVAHILFLSAQHAEIWQFAISMEDYKSEIENWDLGAGIFISFYSLRSTLQENNNTTSELDSLESRNAACADFLSQLNVSLAVWGGRLPVDTSTSQQEEEDEDEEEDKKMASRAVVPRQQPQTKGAVRQKMAAEERTRRVLRDIGNLAIDRPVEGKPLPHIPQPATRKCSQLLTSEQAAAGKNRKEASQIVDRVRPGKGGGIKDVAAQKNELEKPKSEEVVELSPVADKNLKNNIKSLDESKTRRKNVKTLSSILSARSKAACEFGNKRVEPIVNIDEVDADNELAVVEYIDDMHKFYKLTEDENRVNDYMGSQRDINVKMRSILIDWLIEVHRKFELTPETLYLTVHVVDRFLSITAVQRKELQLVGLSSMLLACKYEEIWAPEVNDFVSISANAYVREQILVMEKAILGKLQWRLTVPTPYVFLVRYIKASESSDKEMENMVYFLAELGLMHYPTTVSHRPSMVAASAVYAARCTLDKRPSWTATLEHHTGYFEDQLIDCAKILVGLHLGAAENKLKAVYRKFNSPDRCAVALLRPAAKLRGNSLDFH 1462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1455470 1464602 - BLOR20308 Blo08g00138 64090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00138 1462 Coils Coil 958 978 - -
Blo08g00138 1462 Pfam Nuclear protein 96 606 884 IPR021967 -
Blo08g00138 1462 SUPERFAMILY C-terminal autoproteolytic domain of nucleoporin nup98 71 219 IPR036903 -
Blo08g00138 1462 SUPERFAMILY Cyclin-like 1194 1329 IPR036915 -
Blo08g00138 1462 SMART cyclin_7 1239 1323 IPR013763 -
Blo08g00138 1462 SMART cyclin_7 1336 1420 IPR013763 -
Blo08g00138 1462 CDD CYCLIN 1330 1419 IPR013763 -
Blo08g00138 1462 Pfam Cyclin, N-terminal domain 1207 1329 IPR006671 -
Blo08g00138 1462 Pfam Cyclin, C-terminal domain 1332 1449 IPR004367 -
Blo08g00138 1462 Gene3D - 591 682 - -
Blo08g00138 1462 SUPERFAMILY Cyclin-like 1331 1451 IPR036915 -
Blo08g00138 1462 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP98-NUP96 58 1025 IPR037637 GO:0017056
Blo08g00138 1462 SMART Cyclin_C_2 1332 1451 IPR004367 -
Blo08g00138 1462 MobiDBLite consensus disorder prediction 1 21 - -
Blo08g00138 1462 MobiDBLite consensus disorder prediction 300 326 - -
Blo08g00138 1462 Gene3D Peptidase S59, nucleoporin 74 220 IPR036903 -
Blo08g00138 1462 ProSiteProfiles NUP C-terminal domain profile. 77 213 IPR007230 GO:0005643|GO:0006913|GO:0017056
Blo08g00138 1462 CDD CYCLIN 1233 1322 IPR013763 -
Blo08g00138 1462 ProSitePatterns Cyclins signature. 1234 1265 IPR006671 -
Blo08g00138 1462 MobiDBLite consensus disorder prediction 1 20 - -
Blo08g00138 1462 Gene3D - 1205 1446 - -
Blo08g00138 1462 MobiDBLite consensus disorder prediction 37 59 - -
Blo08g00138 1462 Coils Coil 171 191 - -
Blo08g00138 1462 MobiDBLite consensus disorder prediction 1002 1047 - -
Blo08g00138 1462 MobiDBLite consensus disorder prediction 300 324 - -
Blo08g00138 1462 Pfam Nucleoporin autopeptidase 78 218 IPR007230 GO:0005643|GO:0006913|GO:0017056
Blo08g00138 1462 PANTHER NUCLEOPORIN 58 1025 IPR037665 GO:0005643
Blo08g00138 1462 Gene3D - 1219 1330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01635 Blo-Chr1:56180721 Blo08g00138 Blo-Chr8:1455470 1.25E-77 dispersed
Blo02g00857 Blo-Chr2:32348412 Blo08g00138 Blo-Chr8:1455470 3.10E-34 dispersed
Blo04g00460 Blo-Chr4:3826943 Blo08g00138 Blo-Chr8:1455470 2.63E-67 dispersed
Blo08g00138 Blo-Chr8:1455470 Blo12g00623 Blo-Chr12:24470175 2.25E-129 dispersed
Blo15g00767 Blo-Chr15:26305033 Blo08g00138 Blo-Chr8:1455470 6.85E-38 dispersed
Blo14g00303 Blo-Chr14:3100923 Blo08g00138 Blo-Chr8:1455470 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00138 K14297 - jre:109019371 1275.77