Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00144 ATGGGTTCTCATGAACCTGATGGAAATGGGGCAGAAGCTATTTTGCCTCCACCTCCCTCTTTAATTCCACCAGATGTAGTTCCAGAGCGGGTCGAACAAGAAGCGAAGAAAAAAGTTGTGCGAACACCAATATCTCGTCGCGGTTTTGGATCTAAAGGGCAAAAAATAACTCTTCTTACTAACCATTTTAAAGTCAATGTCTCTAACCTCGAAGGGAATTTTTTCCATTATAGTGTTGCTCTTTCTTTTGAAGATGGCACCCCTGTTGATCAAAAGGGTGTGGGAAGAAAAGTAATTGATAGGGTGTATGAGACGTACAATAGTGAAATGGCTGGAAAAAACTTTGCTTATGACGGAGAAAAGAGTTTGTTCACTTTTGGTCCGCTCCCACGAAATAAACTTGAATTTACTGTTGTGCTTGAGAACGTCTCTTCTAATAGAAATACTGGTAATTCTAGTCCTGACCATCAAGGAAGCCCTAATGATACTGATCGTAAAAGGCAGCGCCGTCCATATCAGTCAAAGACTTTTAAGGTGGAGATAAGCTTTGCTGCAAAGATTCCTACCCAGTCAATTGCAAGTGCCCTTAAGGGGCAGGAGTCAGAAAATTCCCAGGAGGCAATAAGGGTTCTGGATATTATCTTGCGTCAGCATGCATCTAAACAAGGCTGCCTACTTGTGAGGCAATCATTCTTCCACAACAATCCAAAGAATTTTGCTGATGTGGGAGATGTTTCTACGACCATGATCATACAACCTGGGCCTGTGGTAGATTTTTTAATCGCCAATCAGAATGCAAAAGATCCCTTTTCACTTGATTGGGCTAAGGCAAAGCGCACGTTGAAAAACTTGAGGATCAAGGCAAGTCCATCCAATATGGAATATAAGATAACTGGATTGAGTGAGCAAACGTGCAAAAATCAAACGTTTACAATGAAACAAAAAGATGGAAGAGGTGGTGGTGATGGGGAAACGACAGAGGTTACTGTTTATGATTATTTTGTTAACCATCGGCGGATCGAGTTGCGTTATTCTGGCGATCTACCTTGTATCAATGTAGGGAAGCCTAAGAAACCAACATATATCCCCATTGAGGTGATTGCATTGTTTTGCTTGGAAAAGCTTTGCACTCTGGTGTCTTTGCAACGATATACCAAAGCACTGTCGACTTTTCAAAGAGCTTCACTGGTGGAGAAGTCGAGGCAAAAGCCACAAGAGCGGATGAGGGTCTTAACTGATTCTTTAAAAAGCAGCAATTATGAGTCAGAACCAATGCTTCGAGCATGCGGTATTTCAATCAGTAACAACTTTACTCAAGTGGAAGGTCGTGTTCTGTCAGCTCCTAGGCTAAAAGTTGGTAATGGCGAAGACTTCTTTCCCCGAAATGGGAGATGGAACTTTAATAACAAAAAACTAGTGCAGCCGGCTAAGATTGAACGATGGGCTATTGCAAACTTCTCAGCTCGCTGTGACATCCGAGGGCTTGTAAGAGACCTCACCAAATGTGCTGAAATGAAAGGAATTGGCATCGAAGCACCATTTGACGTCTTTGAAGAAAATTCACAGTTTAGACGAGCTCCACCAATGGTTAGAGTGGAGAAGATGTTTGAGGAAATACAATCAAAACTTCCTGGGCAGCCAGGATTTCTTTTGTGTTTGCTTCCTGAGAGAAAGAATTGTGATGTTTATGGTCCATGGAAGCGCAAGAATCTTGCAGAGTATGGTATTCCAACCCAATGCATTGCTCCTACTAGGGTCAATGATCAATACCTTACGAATGTTCTTTTGAAAATCAATGCTAAGATGAGTTTTTTTTTTTCATATTGCCGGTGCTGCCATTGTAAAATAATGATTCACACCCCTTCAATTCCTCTGGTGTCCAAAGTTCCAACCATTATTGTCGGAATGGATGTGTCCCACGGATCTCCTGGCCAATCTGATATACCATCAATTGCTGCGGTAGTCAGCTCCAGGCAGTGGCCACTTATCTCTCGCTATCGAGCTAGTGTCCGGACCCAGTCTCCTAAGGTTGAAATGATTGATTCTCTATACAAACGAATATCTGACGCGGAGGATGATGGGATCTTTAGGGAGCTTCTGCTCGACTTCTACACTAGTTCAGGAAAAAGAAAACCAGATCAAATTATAATTTTCAGGGATGGAGTGAGTGAATCACAATTTAACCAAGTCTTGAACATAGAGCTGGATCAAATGATGGAGGCTTGTAAGTTTCTCGATGAAAAGTGGTCTCCAAAGTTTGTTGTCATAATTGCTCAGAAAAACCATCATACAAAATTTTTCCAATCTGGATCGCCAGATAATGTTCCTCCGGGTACTGTGATAGATAACAGAATTTGTCACCCTCGCAACAATGACTTCTATATGTGCGCCCATGCTGGGATGATTGGAACTACACGGCCCACACATTATCATATTCTGTACGATGAAGTTGGTTTTTCAGCTGATGACCTGCAGGAACTTGTTCATTCGCTGTCATATGTCTACCAAAGAAGTACAACTGCTGTCTCTGTTGTGGCTCCAATTTGCTACGCCCATTTGGCAGCAACCCAAATGGGGCAGTTCATGAAGTTCGAGGAAGTGTCGGAGACCTCGTCCAGCCAGGGTGGTTTGACGTCTGCGGGGGCAGTTCCTGTCCCACAACTGCCGAGGCTGCAGGAGAAAGTTTGTAACTCCATGTTTTTCTTTCATCCCACTGATTCGCCTCCCAGACCGAGCACCTTCTCGGATAAGTCACAGAAGAATCCTCAATCAGCTCCTCCGTCGGGGACCTATGTCGTTCAGATCCCGAAGGACCAAGTGTATCGCGTTCCGCCTCCTGAAAATGCCAAGCGGTACCAGCAGTACACTCGCCAGAAGCACCGCAGGAGCCGTTGTTGCTTCTGTATCTGTTCCTTCTTCGCCGTCCTTGCTTGTCTCATTCTCCTACTTGCCATCGCCGCCGGCGTGTTTTACCTAATCGTTCGTCCTGAATCTCCTAATTACTCAATCAACGCCTTGACAATCGAGGGGATCAACCTTACCTCGTCGTTAGGAAACGCGTCGACCTCATTCTCCCCGGCGATTAACGTCCAACTCCGAGCTGATAACCCTAACAACAAGATTGGAATCTACTACGACAAACAAAGCTCTGTGGAAGTCTATTACTCGGACGTAAAACTCTGCGAAGGAGCATTGCCGGAGTTTTATCAGCCGTCGAACAACGAAACCGTTTTCCAAATTACGTTAAAGGGATCCGGCGTTACACTATCGAACACGACTAACAGATCCCTCTACGACTCGCAGAAGCAAGGACAAGTGCCATTAGAGATGGATCTGAGGGCCCCGGTTCGGCTGAAGGTGGGATCGGTCAGGACATGGGAGATCACAGTCAAAGTGTGGTGCGAGGTGACGGTGGATCAGCTGGCGGCGGAGGCGAAGATAGTTTCTCAGAAGTGCGATTACAGGGTGAAGTTTTGGTAG 3480 44.83 MGSHEPDGNGAEAILPPPPSLIPPDVVPERVEQEAKKKVVRTPISRRGFGSKGQKITLLTNHFKVNVSNLEGNFFHYSVALSFEDGTPVDQKGVGRKVIDRVYETYNSEMAGKNFAYDGEKSLFTFGPLPRNKLEFTVVLENVSSNRNTGNSSPDHQGSPNDTDRKRQRRPYQSKTFKVEISFAAKIPTQSIASALKGQESENSQEAIRVLDIILRQHASKQGCLLVRQSFFHNNPKNFADVGDVSTTMIIQPGPVVDFLIANQNAKDPFSLDWAKAKRTLKNLRIKASPSNMEYKITGLSEQTCKNQTFTMKQKDGRGGGDGETTEVTVYDYFVNHRRIELRYSGDLPCINVGKPKKPTYIPIEVIALFCLEKLCTLVSLQRYTKALSTFQRASLVEKSRQKPQERMRVLTDSLKSSNYESEPMLRACGISISNNFTQVEGRVLSAPRLKVGNGEDFFPRNGRWNFNNKKLVQPAKIERWAIANFSARCDIRGLVRDLTKCAEMKGIGIEAPFDVFEENSQFRRAPPMVRVEKMFEEIQSKLPGQPGFLLCLLPERKNCDVYGPWKRKNLAEYGIPTQCIAPTRVNDQYLTNVLLKINAKMSFFFSYCRCCHCKIMIHTPSIPLVSKVPTIIVGMDVSHGSPGQSDIPSIAAVVSSRQWPLISRYRASVRTQSPKVEMIDSLYKRISDAEDDGIFRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNIELDQMMEACKFLDEKWSPKFVVIIAQKNHHTKFFQSGSPDNVPPGTVIDNRICHPRNNDFYMCAHAGMIGTTRPTHYHILYDEVGFSADDLQELVHSLSYVYQRSTTAVSVVAPICYAHLAATQMGQFMKFEEVSETSSSQGGLTSAGAVPVPQLPRLQEKVCNSMFFFHPTDSPPRPSTFSDKSQKNPQSAPPSGTYVVQIPKDQVYRVPPPENAKRYQQYTRQKHRRSRCCFCICSFFAVLACLILLLAIAAGVFYLIVRPESPNYSINALTIEGINLTSSLGNASTSFSPAINVQLRADNPNNKIGIYYDKQSSVEVYYSDVKLCEGALPEFYQPSNNETVFQITLKGSGVTLSNTTNRSLYDSQKQGQVPLEMDLRAPVRLKVGSVRTWEITVKVWCEVTVDQLAAEAKIVSQKCDYRVKFW 1159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1534041 1540904 + BLOR20314 Blo08g00144 64096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00144 1159 Pfam Piwi domain 550 863 IPR003165 GO:0003676
Blo08g00144 1159 MobiDBLite consensus disorder prediction 145 172 - -
Blo08g00144 1159 Coils Coil 728 748 - -
Blo08g00144 1159 MobiDBLite consensus disorder prediction 1 23 - -
Blo08g00144 1159 SUPERFAMILY Ribonuclease H-like 533 861 IPR012337 -
Blo08g00144 1159 CDD PAZ_argonaute_like 253 366 - -
Blo08g00144 1159 MobiDBLite consensus disorder prediction 908 930 - -
Blo08g00144 1159 ProSiteProfiles PAZ domain profile. 295 371 IPR003100 GO:0005515
Blo08g00144 1159 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 244 901 - -
Blo08g00144 1159 MobiDBLite consensus disorder prediction 907 931 - -
Blo08g00144 1159 CDD Piwi_ago-like 424 857 IPR045246 -
Blo08g00144 1159 ProSiteProfiles Piwi domain profile. 549 863 IPR003165 GO:0003676
Blo08g00144 1159 Gene3D - 622 902 IPR036397 GO:0003676
Blo08g00144 1159 SUPERFAMILY PAZ domain 248 420 IPR036085 GO:0005515
Blo08g00144 1159 Pfam Late embryogenesis abundant protein 1032 1132 IPR004864 -
Blo08g00144 1159 Gene3D - 444 603 - -
Blo08g00144 1159 Pfam PAZ domain 257 396 IPR003100 GO:0005515
Blo08g00144 1159 Gene3D paz domain 247 384 - -
Blo08g00144 1159 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 2 243 - -
Blo08g00144 1159 Pfam Argonaute linker 2 domain 406 451 IPR032472 -
Blo08g00144 1159 Pfam N-terminal domain of argonaute 54 215 IPR032474 -
Blo08g00144 1159 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 244 901 - -
Blo08g00144 1159 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 243 - -
Blo08g00144 1159 SMART Piwi_a_2 549 863 IPR003165 GO:0003676
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01067 Blo08g00144 CCT
Blo03g01067 Blo08g00144 ECH
Blo08g00144 Blo14g00312 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01466 Blo-Chr1:53835956 Blo08g00144 Blo-Chr8:1534041 4.08E-20 dispersed
Blo03g01416 Blo-Chr3:40751315 Blo08g00144 Blo-Chr8:1534041 3.52E-92 dispersed
Blo07g01304 Blo-Chr7:33320999 Blo08g00144 Blo-Chr8:1534041 2.54E-19 dispersed
Blo08g00144 Blo-Chr8:1534041 Blo13g00109 Blo-Chr13:2042432 1.67E-140 dispersed
Blo15g00045 Blo-Chr15:351089 Blo08g00144 Blo-Chr8:1534041 8.05E-36 dispersed
Blo08g00144 Blo-Chr8:1534041 Blo08g00145 Blo-Chr8:1541855 4.22E-35 tandem
Blo04g01215 Blo-Chr4:22975365 Blo08g00144 Blo-Chr8:1534041 0 transposed
Blo14g00312 Blo-Chr14:3201913 Blo08g00144 Blo-Chr8:1534041 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00144 K11593 - csv:101220468 1476.46