Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00150 ATGGATCTCTTACAGTCTCACAGGACGGAGATGATCGGCGTAGCCATAGCTCTTGTTGCCGTTGGTCTTGGCAGCGCCTATTATTTCTATATCACCAAGAAACCCAAAGAATGTTTGGACCCTAATGATTTCAAAGAATTTAAGCTTGTCAAGCGCACCCAACTCAGCCACAATGTGGCTAAGTTCAGATTTGCTCTTCCTACCCCAAACTCAGTCTTGGGTCTTCCAATTGGACAACATATGAGTTGCAGAGGAAAAGACTGTCTTGGCGAAGATGTTGCCAAACCATACACTCCGACGACATTGGATTCAGATATTGGATACTTTGATTTGGTTATAAAGATGTATCCGCAAGGAAGGATGTCCCACCACTTCCGGGAGATGCGCGAAGGAGATTATTTGGCTGTAAAGGGACCTAAGGGTCGGTTCAAGTATCGGCCGAACCAAGTTAGAGCGTTTGGCATGCTTGCTGGTGGCTCTGGGATCACTCCCATGTTCCAGGTGGCAAGAGGAATCTTGGAAAATCCAGTTGACAACACCGTTGTTCATCTTCTATATGCTAATGTCACGTATGAAGACATTCTTCTCAAAGAAGAATTAGACCATCTCGTTAGTAGTTTTCCGGGCCGGATCACTGTGTATTACGTTCTGAATCAGCCTCCTCAAGAGTGGGACGGTGGTGTTGGGTTCATATCCAAGGAAATGATTCAGACGTTTTGTCCTGCTCCTTCCCCTGATATTCAGATACTACGGTGTGGCCCACCTCCAATGAATAAGGCCATGGCTGCCCTGCTTCAAGAACTGGGATACAGCTCCCAAATGCAGTTCCAGTTTTAA 837 46.24 MDLLQSHRTEMIGVAIALVAVGLGSAYYFYITKKPKECLDPNDFKEFKLVKRTQLSHNVAKFRFALPTPNSVLGLPIGQHMSCRGKDCLGEDVAKPYTPTTLDSDIGYFDLVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYRPNQVRAFGMLAGGSGITPMFQVARGILENPVDNTVVHLLYANVTYEDILLKEELDHLVSSFPGRITVYYVLNQPPQEWDGGVGFISKEMIQTFCPAPSPDIQILRCGPPPMNKAMAALLQELGYSSQMQFQF 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1577237 1579305 + BLOR20320 Blo08g00150 64102

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00150 278 Pfam Oxidoreductase FAD-binding domain 47 145 IPR008333 -
Blo08g00150 278 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491
Blo08g00150 278 CDD cyt_b5_reduct_like 47 278 - -
Blo08g00150 278 Pfam Oxidoreductase NAD-binding domain 155 261 IPR001433 GO:0016491
Blo08g00150 278 PRINTS Cytochrome B5 reductase signature 154 173 - -
Blo08g00150 278 PRINTS Cytochrome B5 reductase signature 192 203 - -
Blo08g00150 278 PRINTS Cytochrome B5 reductase signature 95 102 - -
Blo08g00150 278 PRINTS Cytochrome B5 reductase signature 73 84 - -
Blo08g00150 278 PRINTS Cytochrome B5 reductase signature 131 145 - -
Blo08g00150 278 PRINTS Cytochrome B5 reductase signature 248 256 - -
Blo08g00150 278 Gene3D - 136 278 IPR039261 -
Blo08g00150 278 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 278 IPR001834 GO:0016491
Blo08g00150 278 SUPERFAMILY Riboflavin synthase domain-like 35 148 IPR017938 -
Blo08g00150 278 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 278 - -
Blo08g00150 278 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 134 272 IPR039261 -
Blo08g00150 278 Gene3D Translation factors 34 135 - -
Blo08g00150 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 154 173 IPR001709 GO:0016491
Blo08g00150 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 192 203 IPR001709 GO:0016491
Blo08g00150 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 248 256 IPR001709 GO:0016491
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00150 K00326 CYB5R; cytochrome-b5 reductase [EC:1.6.2.2] - jre:109014012 483.796
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00150 Blo-Chr8:1577237 Blo09g00346 Blo-Chr9:13906357 2.43E-132 dispersed
Blo08g00150 Blo-Chr8:1577237 Blo07g01200 Blo-Chr7:31870643 6.47E-142 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo09g00007 . 31 164 NADPH P450 reductases AT5G53560 81.3 2.7e-61 231.5
Blo16g00687 . 1 134 NADPH P450 reductases AT5G53560 69.4 6.0e-53 203.8
Blo02g00229 . 16 121 NADPH P450 reductases AT5G53560 69.8 7.6e-40 160.2
Blo16g00687 . 1 134 NADPH P450 reductases AT5G48810 66.9 2.6e-51 198.4
Blo09g00007 . 31 164 NADPH P450 reductases AT5G48810 62.5 1.8e-47 185.7
Blo07g01073 . 1 138 NADPH P450 reductases AT5G48810 56.7 7.9e-40 160.2
Blo16g00687 . 22 133 NADPH P450 reductases AT2G32720 83.0 3.6e-50 194.5
Blo02g00229 . 16 120 NADPH P450 reductases AT2G32720 84.8 1.7e-47 185.7
Blo09g00007 . 52 163 NADPH P450 reductases AT2G32720 67.9 9.0e-41 163.3
Blo07g01200 . 399 723 NADPH P450 reductases AT5G17770 68.9 1.4e-123 439.5
Blo08g00150 . 8 278 NADPH P450 reductases AT5G17770 76.0 1.8e-120 429.1
Blo09g00346 . 2 251 NADPH P450 reductases AT5G17770 80.0 2.3e-115 412.1
Blo09g00007 . 31 164 NADPH P450 reductases AT5G53560 81.3 2.7e-61 231.5
Blo16g00687 . 1 134 NADPH P450 reductases AT5G53560 69.4 6.0e-53 203.8
Blo02g00229 . 16 121 NADPH P450 reductases AT5G53560 69.8 7.6e-40 160.2
Blo16g00687 . 1 134 NADPH P450 reductases AT5G48810 66.9 2.6e-51 198.4
Blo09g00007 . 31 164 NADPH P450 reductases AT5G48810 62.5 1.8e-47 185.7
Blo07g01073 . 1 138 NADPH P450 reductases AT5G48810 56.7 7.9e-40 160.2
Blo16g00687 . 22 133 NADPH P450 reductases AT2G32720 83.0 3.6e-50 194.5
Blo02g00229 . 16 120 NADPH P450 reductases AT2G32720 84.8 1.7e-47 185.7
Blo09g00007 . 52 163 NADPH P450 reductases AT2G32720 67.9 9.0e-41 163.3
Blo07g01200 . 399 723 NADPH P450 reductases AT5G17770 68.9 1.4e-123 439.5
Blo08g00150 . 8 278 NADPH P450 reductases AT5G17770 76.0 1.8e-120 429.1
Blo09g00346 . 2 251 NADPH P450 reductases AT5G17770 80.0 2.3e-115 412.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000880 3 3 2 3 3 2 4 3 2 3 3 3 4 3 3 4 3 4 4 2 3 2 2 3 2 1 1 3 5 3 86
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo08g00150 Blo_Chr08 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0