Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00163 ATGGCAGCGGCGGTCGCTCGCGAAAGGACGAAATTGCGACTGGAAATGGCGAACGGCGACCGCGCGAGGGCTGCAAACGACGAACCGGCGAGCAGCGACGTCGGGCGAGAGCGGTGGTCGACTCCCGGACTGCCGAAGAACAACGCCGGTGGCCGCAGGCTTCCGATCTTGAGTGATGCCGGCGACAGAACAGCTCAACCCGAGCGTGTTCCTCCGATTCCGGCGAGCCTCGGATCCGCGATGAAGCAGCTCCGAACTATCGGATCTGTGACGGAACAGCTCCGGCCAAACCCTACTCTGGTTTCCGGCGACGAACAGATTTTTGTTTCCGGTGACAAACTGCTCCGATCTGTTCAGTGGGTGAGGATTCCGGACGAACAAATCTCCGGCGACGGCAGCTTCGGATCTGAACATATTCAGATTTTCCGACGAGCAGAACAGGACGTAGATCTCATCCTATTGGCTTTGACGATTTTGGCGAGTGTGCCACGATTTTCGAAGAGGCAGTTACGCCGCTTAACCGTAAGGAACTTCGAAAAGTATATTGTGCATAGATCGAGGGACGGATTAGCTAGCCTCTTGAATACCTTCTTCTGCGTGAAGGTTGATTGTTTGGCGTATAAAAATATAGGAAACAAGAAAGTTTCGGCAGTTACAATTATCGCCATTGTCGTCCCAGTCCTGGTCTCTTTAGTGTTTCTCTCCATCTGCTTCTGCTTACTAAGAAGAAGGAGAGCCAAAGGCAGAGCAGACAAGTCTTTGGAGAAGAAATGTCAACCATCGAGTCGTTGCAATTCGATTGAAGCTGCCACCAACAGATTTTCGCACGATAACAAGATTGGCGAGGGCGGATTTGGGGCTGTTTATAAGGGTGTTCTTCTTAAAGGGGAAGAAATAGCTGTAAAGAGACTATCAGGAAGTTCCACACAAGGCGAAGTGGAGTTCAAGAATGAGGTTTTCCTTGTGGCCAAGCTTCAACACCGGAATCTAGTGAGACTCCTCGGATTTTGCTTAGAACGAAACGAAAGAATCCTCGTCTATGAATACGTCCCCAACAAAAGCCTTGACTACTTTCTATTTGATTTTGAAAAGAAAAGGCAATTGGATTGGACCCAACGATACAAGATCATAGTCGGGATAGCTCGAGGAATTCTATATCTTCACGAAGACTCGAGACTCACAATCATTCATCGAGATATCAAAGTCAGCAATGTACTGTTAGACCCCAACATGAATCCAAAAGTTTCAGACTTTGGAATGGCAAGGATCTTCGTGGTTGATCAAACGCAGGCCAACACAAATCGAGTAGTTGGAACATATGGTTATATGTCGCCGGAATATGCAATGCAAGGCCACTTTTCAGTGAAGTCGGATGTGTTCAGCTTTGAAGTTTTGGTTATGGAAATCCTTACAGGGAAGAGGAACAGTTCTTTCTATCAATCAGATAATGCAGAGGACCTTTTGAGCTACGTTTGGAAGCATTGGAGGGATGGAACGGCGTTGGAAATATTGGATGAAACGTTGAAGGATTATGGTTACGCAAGAGAAGAAGTGATGAGGTGCATTCATATGGGTTTGCTGTGCGTTCAGGAAGATCCAGTGGATAGACCAACAATGGCTGACGTAGTTATGATGCTTAGCAGTTACACTATGAGTCTCTCTTTGCCTCAGCAGCCCGTGTTTTTTGCTAGCAGCCGAACCCAAGATAAAGTGTCGGAAGGCGAGCCACAGTCTGATTCATCGACAAGCAAGTCGGTTCCATTAGCTAATAATGAAGCCTCAATCACTGAAATAGTCCCTCGCTAG 1806 47.73 MAAAVARERTKLRLEMANGDRARAANDEPASSDVGRERWSTPGLPKNNAGGRRLPILSDAGDRTAQPERVPPIPASLGSAMKQLRTIGSVTEQLRPNPTLVSGDEQIFVSGDKLLRSVQWVRIPDEQISGDGSFGSEHIQIFRRAEQDVDLILLALTILASVPRFSKRQLRRLTVRNFEKYIVHRSRDGLASLLNTFFCVKVDCLAYKNIGNKKVSAVTIIAIVVPVLVSLVFLSICFCLLRRRRAKGRADKSLEKKCQPSSRCNSIEAATNRFSHDNKIGEGGFGAVYKGVLLKGEEIAVKRLSGSSTQGEVEFKNEVFLVAKLQHRNLVRLLGFCLERNERILVYEYVPNKSLDYFLFDFEKKRQLDWTQRYKIIVGIARGILYLHEDSRLTIIHRDIKVSNVLLDPNMNPKVSDFGMARIFVVDQTQANTNRVVGTYGYMSPEYAMQGHFSVKSDVFSFEVLVMEILTGKRNSSFYQSDNAEDLLSYVWKHWRDGTALEILDETLKDYGYAREEVMRCIHMGLLCVQEDPVDRPTMADVVMMLSSYTMSLSLPQQPVFFASSRTQDKVSEGEPQSDSSTSKSVPLANNEASITEIVPR 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1675259 1679808 + BLOR20333 Blo08g00163 64115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00163 601 MobiDBLite consensus disorder prediction 565 601 - -
Blo08g00163 601 ProSiteProfiles Protein kinase domain profile. 274 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00163 601 MobiDBLite consensus disorder prediction 8 34 - -
Blo08g00163 601 MobiDBLite consensus disorder prediction 1 75 - -
Blo08g00163 601 ProSitePatterns Protein kinases ATP-binding region signature. 280 302 IPR017441 GO:0005524
Blo08g00163 601 Gene3D Transferase(Phosphotransferase) domain 1 350 558 - -
Blo08g00163 601 PANTHER PROTEIN, PUTATIVE ISOFORM 1-RELATED 208 599 - -
Blo08g00163 601 MobiDBLite consensus disorder prediction 565 592 - -
Blo08g00163 601 CDD STKc_IRAK 280 546 - -
Blo08g00163 601 Pfam Protein tyrosine and serine/threonine kinase 277 545 IPR001245 GO:0004672|GO:0006468
Blo08g00163 601 SUPERFAMILY Protein kinase-like (PK-like) 265 578 IPR011009 -
Blo08g00163 601 Gene3D Phosphorylase Kinase; domain 1 236 349 - -
Blo08g00163 601 SMART serkin_6 274 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00163 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Blo08g00163 601 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 208 599 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00161 Blo-Chr8:1664977 Blo08g00163 Blo-Chr8:1675259 0 dispersed
Blo08g00163 Blo-Chr8:1675259 Blo14g00335 Blo-Chr14:3439167 1.04E-135 dispersed
Blo18g00247 Blo-Chr18:2552074 Blo08g00163 Blo-Chr8:1675259 6.44E-33 dispersed
Blo19g00263 Blo-Chr19:15160008 Blo08g00163 Blo-Chr8:1675259 1.24E-26 dispersed
Blo08g00163 Blo-Chr8:1675259 Blo08g00164 Blo-Chr8:1772114 8.00E-65 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84431 PF07714 PK_Tyr_Ser-Thr 1.80E-45 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00163 - - twl:120005005 497.278