Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo08g00183 | ATGGCGTCTGCTGCTGCCCCCGCTGGCCCGTCTTCCTCATCGTCGATGAAGGTTTGTTATAACTCTGACTGCAAGGAATTGAAACCGGAGAGGTCGAGGAAAGGTTGGCGTCTTCAGACTGGCGAGTTTGCGGAGCTCTGTGATCGATGCGGTTGTGCTTATGAAGAAGGAAGATTCTGTGAAACTTTCCACTTAAATGCTACTGGTTGGAGATGCTGTGAGTCGTGTGGGAAGCGTGTTCATTGTGGATGTATTGTCTCGGCTCATGGATTTTCTTTACTGGATCCTGGAGGTATCGAGTGCATGGTGTGTTCAAGGAAGAACTCCATTATGACTCCACATCCAATGTGGTCGCCTTCTATGTTTTTCCATTCGTCTTTCCCAGACAGACTCAAAGACCTATCTGTGAAGAATTGGAGTCAATTGGCTGGATCAGGGCCTGTACCATGGCGACAAGCTCCAAGTCTATTCAATTCTTCTCTTGCTACACCTGAAATGCATTCTAGGATTCCATATGAAGTTGACATGGCAACTGGAATTGGCAAACCTAGTTCCATTGAAAAACCATCTACTCCTTGTTTTGAGAGACAGAAAAATGAGGATTTTTCTGAACGATTCTTGAATGGAAACCTGAAGCATGGTCCACGGGATATATGTGAGAGTGGGAATGCAGGCACGTTAACTAATTTTGTTATTGTTACAGGGATCAAACGCGAAGAGCAATACAATTCGTGTTCTAACCCAATACAACATTCTATTTCCTTGAAGGAGGATTCATCTATCCCACCATTTGGTTTAAATATTCCGTATGCATCTCCGAATGATAAAAGTTGTCAAAATGGAGTTTCTGGAACTCATTTAAGACCAACTCATCCACCTCCTCATGCCAAACAGTTGAATAGCATTCATAGCAGTTTACAAAACGGAACTGATTTACCTAATGAAAATAATATTCGTAATGGAAGGTCTCGAGCAGATCAACGAGGAAGAAATTATTTACTTCCAAGATATTGGCCTCGATTTACTGATCAAGAGCTACAGCAAATATCTGCTGATTCAAACTCTGTGATTACTCCTTTATTTGAGAAAATGTTAAGTGCTAGTGATGCTGGGCGGATTGGGCGGTTAGTACTTCCAAAAAAATGTGCAGAGGCTTATTTTCCATCAATCTCCCAACCGGAAGGATTACCTTTGAAAGTCCAGGATGCAAAAGGAAAGGAGTGGATATTTCAATTTCGCTTCTGGCCCAATAATAATAGTAGGATGTATGTTCTTGAAGGTGTTACTCCTTGCATACAAGCCATGCAATTGCAAGCAGGCGATATAGTAACGTTTAGTCGATTAGAGCCAGAAGGGAAGTTGGTTATGGGGTTCAGAAGGGCTACAACAGCACCTGATCAGGAGAATGAAATAAATAAGACTCTCAACGGAGTTCCTACCCATGGAGACGCTGACATGGTGGAGCCAAATTCATGGACGAAAGTTGATAAGTCAGGATACATAGCAAAAGAAGTCTTGGGAGCAAAGCCTCTTGTTGCTAGAAAGAGGAAAAATAGCACACCAGGTTCAAAGACTAAACGACTTAAAATTGAAAGTGAGGACATTATAGAACTGAAGTTGACTTGGGAAGAAGCTCAAGGATTGCTCCGTCCCCCTTCTAACCATGTTCCCAGTATTGTGGTGATTGAAGGCTTTGAGTTTGAGGAATATGAGGATGCTCCAATAATTGGGAGGCCAACCATTATAACTTCTGATAATACATGCAATAAAGCTAAACTGGCAGACTTTCTGCATGTAATTATTCTTAAAATCTTCTTTACGCTGCCTGGTAGATCCATTTGTTCCGCCGCCCAAGAACTGACTACAGAACAGCTTGAAGAAATGCTAGCCCCCAGTTACTCGGCTCCTAAGAAAATGAAGGCTGCCAAACAAGAACCAGAACAGGTCGAGGCTTTAGAGGGGCTTGACGCTCTTGCAAACCTAGCTATATTGGGCGAGGGCGATTCAGTCCAGGCATCTTCACAGGCCACTACAAAGCACCCTCGCCATAGACCTGGCTGCTCTTGCATTGTCTGCATCCAACCTCCGAGCGGTAAGGGCCCCAAACATAAGCAAACATGTACATGTATTGTCTGCCTGACAGTAAAACGTAGATTCAGAACTCTAATGCTTCGCCGAGAAAGAAAACAGACAGAGCGGGAAGCAGAAACCACCCGCAAAAAGCAGCAACTATCAGTGCCTGAAGTGGATGATGAAATTCTGGAAAGTAGTAGTAGTAGACTGGTGGAGAAGGAGATGAATGATTGTTCTGATGATGATCCGACCAAGAAAAGAGCATCAACATCACCTTTTAAAGGACAAATTGATTTGAATATCCAACCGGAAAGAGAGGAAGAGCTGTCTCCTGGTTCGGACTCCGGCACCGTGATGAAGTTGCTCCAAGATGCATCCGAGAGGAGTCTCGGGCCGCCAAAAGTATCCGGCTCTGATGGAAGTATATCAAGCAATCCAGCGGAGCCTAGTGGAGGTGGAGCTCCGGCTGAAATTAGTAATAATAATGGCGTCGACCTCAGCAATAATTGTGAAGAAGATGACAAAGAACTTCCAGCAACTTTTACAAACATTTTGGCGTCCATGTCAGCCACTGGGTTGAAGTTATCTGCATCTTCCTCCTGGAGCTTGCTCACCTTCTACCACTGGCAAAGGAGAAAAGACACGAGAGTATTTTCTCGATCTGCACAAGCTGGCAAGGATCAAAACTCGGGCAAGATGAACGATCTGTTCTCTAACTCTTTCAAAAAATACGCAGACCTGAAGCAGCAGGCCTACGAAGACGGAATGGAGGCAGGAAACGAGACGGTAAATCTCGATAAGTTTTTTGAAGACGTTGAGAATGTGAAGGAAGACATGAGACAGGTGGAAAAGCTCTACAAGAAACTACAAGAAGCAAATGAAGAAAGCAAAGTAGTCCACAACGCAAAAACCATGAAGGAATTGAGAGCAAGAATGGATCAAGATGTCAGCCAGGTCTTAAGAAGAGTCAAAGTGATCAAAGGAAAGCTCGAAGCTCTCGATCGATCAAACGCATCCCATCGAAGCCTTCCCGGGTGCGGACCCGGTTCGTCTGCGGATAGAACAAGAACCTCAGTGGTGAGTGGATTGGGGAAGAAACTTAAAGACACCATGGATGATTTTCAGAGCTTAAGATCTAGAATGAATGCAGAATACAAAGAAACAGTAGAACGCAGGTATTTCACAATCACAGGAGAGAAGGCAAATGAAGAAACAATCGAGAATCTGATATCGAGCGGAGAAAGCGAAAATTTTCTGCAGAAAGCGATTCAAGAACAGGGTAGAGGCCAAATAATGGACACAATATCAGAAATACAAGAAAGGCACGATGCAGTGAAGGAGATAGAGAAGAACCTGATTGAGCTGCACCAGATATTTCTTGACATGGCTGCACTTGTGGAGGCGCAGGGGCATCAGCTCAACGACATAGAGAGTCACGTTGCACATGCTAATTCGTTTGTCCGGCGAGGCACTGAGCAGCTGCAGGAGGCCAGAGAACATCAGAAAAGCTCGAGGAAATGGACGTGCATTGCTGTAGTTCTCGGCGCAGTTCTCGTTGCCGTTCTGCTCTTCCCGCTTTTGACGTCGATTTTCCCCCATTTGATGTAG | 3681 | 44.5 | MASAAAPAGPSSSSSMKVCYNSDCKELKPERSRKGWRLQTGEFAELCDRCGCAYEEGRFCETFHLNATGWRCCESCGKRVHCGCIVSAHGFSLLDPGGIECMVCSRKNSIMTPHPMWSPSMFFHSSFPDRLKDLSVKNWSQLAGSGPVPWRQAPSLFNSSLATPEMHSRIPYEVDMATGIGKPSSIEKPSTPCFERQKNEDFSERFLNGNLKHGPRDICESGNAGTLTNFVIVTGIKREEQYNSCSNPIQHSISLKEDSSIPPFGLNIPYASPNDKSCQNGVSGTHLRPTHPPPHAKQLNSIHSSLQNGTDLPNENNIRNGRSRADQRGRNYLLPRYWPRFTDQELQQISADSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPSISQPEGLPLKVQDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQAMQLQAGDIVTFSRLEPEGKLVMGFRRATTAPDQENEINKTLNGVPTHGDADMVEPNSWTKVDKSGYIAKEVLGAKPLVARKRKNSTPGSKTKRLKIESEDIIELKLTWEEAQGLLRPPSNHVPSIVVIEGFEFEEYEDAPIIGRPTIITSDNTCNKAKLADFLHVIILKIFFTLPGRSICSAAQELTTEQLEEMLAPSYSAPKKMKAAKQEPEQVEALEGLDALANLAILGEGDSVQASSQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCIVCLTVKRRFRTLMLRRERKQTEREAETTRKKQQLSVPEVDDEILESSSSRLVEKEMNDCSDDDPTKKRASTSPFKGQIDLNIQPEREEELSPGSDSGTVMKLLQDASERSLGPPKVSGSDGSISSNPAEPSGGGAPAEISNNNGVDLSNNCEEDDKELPATFTNILASMSATGLKLSASSSWSLLTFYHWQRRKDTRVFSRSAQAGKDQNSGKMNDLFSNSFKKYADLKQQAYEDGMEAGNETVNLDKFFEDVENVKEDMRQVEKLYKKLQEANEESKVVHNAKTMKELRARMDQDVSQVLRRVKVIKGKLEALDRSNASHRSLPGCGPGSSADRTRTSVVSGLGKKLKDTMDDFQSLRSRMNAEYKETVERRYFTITGEKANEETIENLISSGESENFLQKAIQEQGRGQIMDTISEIQERHDAVKEIEKNLIELHQIFLDMAALVEAQGHQLNDIESHVAHANSFVRRGTEQLQEAREHQKSSRKWTCIAVVLGAVLVAVLLFPLLTSIFPHLM | 1226 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 2085505 | 2099590 | + | BLOR20353 | Blo08g00183 | 64135 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo08g00183 | 1226 | Gene3D | - | 956 | 1083 | - | - | |
Blo08g00183 | 1226 | Pfam | Syntaxin | 958 | 1161 | IPR006011 | GO:0016020 | |
Blo08g00183 | 1226 | MobiDBLite | consensus disorder prediction | 1029 | 1050 | - | - | |
Blo08g00183 | 1226 | MobiDBLite | consensus disorder prediction | 275 | 326 | - | - | |
Blo08g00183 | 1226 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 | 14 | 807 | - | - | |
Blo08g00183 | 1226 | SMART | B3_2 | 361 | 462 | IPR003340 | GO:0003677 | |
Blo08g00183 | 1226 | MobiDBLite | consensus disorder prediction | 725 | 860 | - | - | |
Blo08g00183 | 1226 | CDD | B3_DNA | 359 | 460 | IPR003340 | GO:0003677 | |
Blo08g00183 | 1226 | Pfam | SNARE domain | 1163 | 1214 | IPR000727 | - | |
Blo08g00183 | 1226 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS07G0563300-LIKE ISOFORM X1 | 14 | 807 | - | - | |
Blo08g00183 | 1226 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 1126 | 1188 | IPR000727 | - | |
Blo08g00183 | 1226 | ProSitePatterns | Syntaxin / epimorphin family signature. | 1132 | 1171 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 | |
Blo08g00183 | 1226 | Pfam | B3 DNA binding domain | 361 | 461 | IPR003340 | GO:0003677 | |
Blo08g00183 | 1226 | SMART | SynN_4 | 951 | 1077 | IPR006011 | GO:0016020 | |
Blo08g00183 | 1226 | Gene3D | - | 1119 | 1219 | - | - | |
Blo08g00183 | 1226 | Gene3D | - | 339 | 466 | IPR015300 | - | |
Blo08g00183 | 1226 | Coils | Coil | 956 | 993 | - | - | |
Blo08g00183 | 1226 | MobiDBLite | consensus disorder prediction | 725 | 779 | - | - | |
Blo08g00183 | 1226 | SUPERFAMILY | DNA-binding pseudobarrel domain | 358 | 461 | IPR015300 | - | |
Blo08g00183 | 1226 | SUPERFAMILY | t-snare proteins | 955 | 1181 | IPR010989 | GO:0016020|GO:0016192 | |
Blo08g00183 | 1226 | CDD | SynN | 956 | 1113 | IPR006011 | GO:0016020 | |
Blo08g00183 | 1226 | MobiDBLite | consensus disorder prediction | 297 | 320 | - | - | |
Blo08g00183 | 1226 | CDD | SNARE_syntaxin1-like | 1125 | 1187 | - | - | |
Blo08g00183 | 1226 | SMART | tSNARE_6 | 1121 | 1188 | IPR000727 | - | |
Blo08g00183 | 1226 | ProSiteProfiles | B3 DNA-binding domain profile. | 361 | 462 | IPR003340 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g01197 | Blo-Chr3:38216882 | Blo08g00183 | Blo-Chr8:2085505 | 1.26E-162 | dispersed | |
Blo04g00912 | Blo-Chr4:10701857 | Blo08g00183 | Blo-Chr8:2085505 | 3.16E-51 | dispersed | |
Blo08g00183 | Blo-Chr8:2085505 | Blo09g00301 | Blo-Chr9:12804074 | 6.49E-25 | dispersed | |
Blo10g00609 | Blo-Chr10:18598301 | Blo08g00183 | Blo-Chr8:2085505 | 1.97E-16 | dispersed | |
Blo16g00051 | Blo-Chr16:1903083 | Blo08g00183 | Blo-Chr8:2085505 | 1.12E-45 | dispersed | |
Blo18g00545 | Blo-Chr18:7632504 | Blo08g00183 | Blo-Chr8:2085505 | 1.58E-17 | dispersed | |
Blo19g00130 | Blo-Chr19:3745824 | Blo08g00183 | Blo-Chr8:2085505 | 2.05E-16 | dispersed | |
Blo14g00365 | Blo-Chr14:3972538 | Blo08g00183 | Blo-Chr8:2085505 | 0 | transposed | |
Blo15g00503 | Blo-Chr15:8565426 | Blo08g00183 | Blo-Chr8:2085505 | 8.50E-69 | transposed | |
Blo14g00364 | Blo-Chr14:3958679 | Blo08g00183 | Blo-Chr8:2085505 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12717 | PF00804 | Syntaxin | 6.50E-73 | CL0445 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo08g00183 | - | - | csv:101209415 | 1175.61 |