Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00204 ATGGAAGAAGACGCCAATTCCTGGTTAAGGAGAACGGCATTTTCTCACACCGTTTGTCATCGATTGGATTTGTTGAAATATACTTCAGTTCCTATCAACTTTCAGCCCGATCGGAATTTGGAGTTTAGATCAAGACCTCAAATTTCAACTTCCGATCACAATTTGGCTACCTGTAGTTCTCAAATTTATCGGAATCCGAAGCAGAGGTCTTCGTCTCCCCTTCCCAAGACCATACTCTCCCACGAATTTAAGGAAGCACAGTCTGATCGGAAGCGATTTTCATCTCCATGTCCTCGCCCGAGAGAACCTGAGACGCTGAAAATTGAAAAGACGAAATCGTCTGATTTGAGGTTGCTTTCGAGTGCGAATCTTTTGAAGCATTTTGCTTCGAATAAAGGACAGGAAAAGTCCAAACCGAGAAAGGAATCTGGGTGGACTAAGTATTTTGATTATGGTGGAGGTAGAGTAACTGCTGTGGAAGCAGCTGACGAGTTTAGTGTCGATATGTCCAAGCTGTTTCTTGGTCTAAGGTTTGCCCATGGAGCTCATAGCCGTCTCTACCATGGAGTCTATAAAGATGAACCAGTCGCTGTAAAGATGATCAGAGTTCCAGATGATGATGAAAATGGAGTTCTAGGAGCTCGACTGGAGAAGCAATATAGCAGAGAAGTCTCCCTACTCTCTCGTCTCCATCATCCAAATGTGATAAAGTTTACAGCAGCCTGTAGAGAGCCGCCGGTCTATTGTATCATCACGGAATATCTTCAAGAGGGATCGCTAAGGGCATATTTGCACAAACGAGAGAGAAAACCTCTTCCTTTACGACAACTTGTCGAATTTTCATTGGATATTTCTCGAGGGATGGAGTTCATTCACTCCCAAGGCATCATTCATCGGGATCTCAAGCCCGAGAATGTTATTATCGATCAAGAATTCCACCTAAAAGTTGCCGATTTTGGCATAGCTTGTGAAGAGGCGTATTGTGATGCTCTGGCTGACGATCCAGGGACTTACCGGTGGATGGCTCCCGAGATGATCAAACACAAATCTTACGGCCGGAAAGTTGATGTCTACAGTTTTGGGCTCATCTTGTGGGAAATGGTCACCGGAGCTGTTCCCTACGAGCACATGACCCCAATCCAAGCCGCCTATGCGGTGGTGAATAAGAATCTTAGACCAGCAATTCCGGACAGCTGTCCACACGCAATGAGAGCGCTGATCGAACAATGTTGGTCGGTGGAGCCAAAAAAGAGGCCAGAGTTTTGGCAAGTGGTTAAGGTTTTGGAGCAATTCGAAAGATCTCTCGCCCACAACGATACGCTGAATCTGGTGCAGAATCCGGGTCGACCAAGTTGCCATGATCATAAGAAAAAGCTTCTCCAATGGATTCAACAGGTGGGAGGCCAGAAGCCCTCTGCATTCAAACACTCAGCACATGCCTAA 1443 45.88 MEEDANSWLRRTAFSHTVCHRLDLLKYTSVPINFQPDRNLEFRSRPQISTSDHNLATCSSQIYRNPKQRSSSPLPKTILSHEFKEAQSDRKRFSSPCPRPREPETLKIEKTKSSDLRLLSSANLLKHFASNKGQEKSKPRKESGWTKYFDYGGGRVTAVEAADEFSVDMSKLFLGLRFAHGAHSRLYHGVYKDEPVAVKMIRVPDDDENGVLGARLEKQYSREVSLLSRLHHPNVIKFTAACREPPVYCIITEYLQEGSLRAYLHKRERKPLPLRQLVEFSLDISRGMEFIHSQGIIHRDLKPENVIIDQEFHLKVADFGIACEEAYCDALADDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVTGAVPYEHMTPIQAAYAVVNKNLRPAIPDSCPHAMRALIEQCWSVEPKKRPEFWQVVKVLEQFERSLAHNDTLNLVQNPGRPSCHDHKKKLLQWIQQVGGQKPSAFKHSAHA 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2323620 2325265 - BLOR20374 Blo08g00204 64156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00204 480 SMART serkin_6 172 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00204 480 Pfam Protein tyrosine and serine/threonine kinase 178 428 IPR001245 GO:0004672|GO:0006468
Blo08g00204 480 Gene3D Transferase(Phosphotransferase) domain 1 257 474 - -
Blo08g00204 480 CDD STKc_MAP3K-like 179 428 - -
Blo08g00204 480 PRINTS Tyrosine kinase catalytic domain signature 252 265 IPR001245 GO:0004672|GO:0006468
Blo08g00204 480 PRINTS Tyrosine kinase catalytic domain signature 290 308 IPR001245 GO:0004672|GO:0006468
Blo08g00204 480 PRINTS Tyrosine kinase catalytic domain signature 355 377 IPR001245 GO:0004672|GO:0006468
Blo08g00204 480 PRINTS Tyrosine kinase catalytic domain signature 399 421 IPR001245 GO:0004672|GO:0006468
Blo08g00204 480 PRINTS Tyrosine kinase catalytic domain signature 336 346 IPR001245 GO:0004672|GO:0006468
Blo08g00204 480 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 455 - -
Blo08g00204 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Blo08g00204 480 Gene3D Phosphorylase Kinase; domain 1 161 256 - -
Blo08g00204 480 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 455 - -
Blo08g00204 480 ProSiteProfiles Protein kinase domain profile. 172 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00204 480 SUPERFAMILY Protein kinase-like (PK-like) 163 428 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00328 Blo-Chr3:6872385 Blo08g00204 Blo-Chr8:2323620 3.87E-29 dispersed
Blo04g00738 Blo-Chr4:6896254 Blo08g00204 Blo-Chr8:2323620 7.73E-113 dispersed
Blo08g00204 Blo-Chr8:2323620 Blo14g00025 Blo-Chr14:173351 4.45E-109 dispersed
Blo19g00360 Blo-Chr19:23320066 Blo08g00204 Blo-Chr8:2323620 5.27E-29 dispersed
Blo01g00844 Blo-Chr1:14794983 Blo08g00204 Blo-Chr8:2323620 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84435 PF07714 PK_Tyr_Ser-Thr 3.20E-62 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00204 - - jre:109014417 681.019