Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00215 ATGGAGTCTCGCGTGCTATCACGCGCATCCGCATTCGCCGGAATTCCTCCCCTCCGAAAGCGGCCGAGAGAGAGTAGCAGCCACGTATGCTTAGTGTCATCTGGGTCGACTGGCGACGGAGGAAACCTACTATGGGGAAGGCAACTCCGTCCTGCTCTACTAATCCAGCACTCTCCAGCAGGACTCGTTGGATCGAGTAAGAGAGAGATTCTTCGGCCATGCCTCGCTGCTGCCTCCTCACCCGCTGGAGGGAGCGATTCCGCCGGGGAAGGTAAAATTGCTCCGGTGGGGTTTTTTAACAAGTATCCGGCTCTTGTCACCGGCTTCTTTTTCTTCATGTGGTACTTTCTGAACGTTATCTTCAACATCATTAACAAGAAGATCTATAACTACTTCCCTTACCCTTATTTTGTCTCGGTCGTTCATTTGTTTGTCGGGGTGGTCTATTGTTTGTTAAGCTGGGTTGTGGGTCTTCCTAAGCGCGCTCCCGTTGATTCGAATCTCTTGAAGCTTCTCATCCCTGTAGCTTTCTGTCATGCACTTGGCCATGTGACAAGCAATGTCTCCTTCGCTGCTGTTGCTGTCTCCTTCACACATACTATTAAAGCTCTCGAACCTTTCTTCAATGCTGCTGCTTCTCAGTTCATACTTGGACAGGCGATCCCTGTATCTCTATGGCTTTCATTGGCCCCTGTTGTTATTGGTGTTTCAATGGCATCATTGACTGAACTCTCATTCAATTGGCTTGGCTTCATTAGTGCTATGATTTCCAACATCTCTTTTACTTACAGGAGTATTTACTCAAAGAAAGCCATGACGGACATGGATAGCACAAATGTGTATGCCTACATTTCCATAATTGCACTTCTTTTCTGTTTACCTCCTGCTGCCATCATAGATGGCCCTCAGCTGCTTAAGCATGGGTTTAATGATGCAATTGCTAAAGTTGGTCTTAATAAGTTGCTCTTTGATCTCTTCTGGGTAGGAATGTTTTATCATCTCTACAATCAGGTGGCCACCAACACTCTGGAGAGGGTGGCTCCTTTAACTCACGCTGTTGGCAACGTGTTGAAACGTGTATTTGTGATTGGTTTCTCCATCATCGTCTTCGGCAACAAAATTTCAACTCAAACTGGAATTGGAACATGCATTGCGATTGCGGGTGTGGCTCTTTACTCCTACATCAAAGCCAAGATGGAAGAAGAGAAACGAGTGAGTTTAGTCTCTGACTCCTCCTGTCTATTCATTAATGTTCATGGCCAATTGAAATTTTCATGA 1278 46.17 MESRVLSRASAFAGIPPLRKRPRESSSHVCLVSSGSTGDGGNLLWGRQLRPALLIQHSPAGLVGSSKREILRPCLAAASSPAGGSDSAGEGKIAPVGFFNKYPALVTGFFFFMWYFLNVIFNIINKKIYNYFPYPYFVSVVHLFVGVVYCLLSWVVGLPKRAPVDSNLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQAIPVSLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALLFCLPPAAIIDGPQLLKHGFNDAIAKVGLNKLLFDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTCIAIAGVALYSYIKAKMEEEKRVSLVSDSSCLFINVHGQLKFS 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2519115 2521596 - BLOR20385 Blo08g00215 64167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00215 425 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 105 403 IPR004696 GO:0016021|GO:0022857|GO:0055085
Blo08g00215 425 Pfam Triose-phosphate Transporter family 106 393 IPR004853 -
Blo08g00215 425 PANTHER SOLUTE CARRIER FAMILY 35 33 407 - -
Blo08g00215 425 PANTHER BNAC02G47130D PROTEIN 33 407 - -
Blo08g00215 425 SUPERFAMILY Multidrug resistance efflux transporter EmrE 323 394 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00215 Blo-Chr8:2519115 Blo11g00659 Blo-Chr11:7046379 3.62E-62 dispersed
Blo14g00408 Blo-Chr14:4505368 Blo08g00215 Blo-Chr8:2519115 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00215 K15283 - twl:120005115 639.032