Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00221 ATGGGTGGTCTGATCGATCTGAACACGGCCGACGACGATGACACTCCATCTTTTGCTGGTTCCCCTACTTCGTCTTCATCTGCTTCTGGTTCTTCTTCTTCCGCTTCGATTTGCTTGGAGTTATGGCACGCCTGCGCAGGTCCTCTAATTTCACTGCCGAAGAAAGGCAGTGTGGTCGTGTATCTGCCGCAAGCTCACTTGGAAATGGTGCAAGATTTTCCCATTAGCGCCACTGATCTTCCTCCTCACCTCTTCTGTCGTGTTCTTGATGCAGAGGCGGGTACGGATGAGGTTTACGCTCGAGTTTCTCTAATTCCTGAAAGTGAGAACTTTGAGCAGAAACTGCAAGAAGGGGAAATCCATGCCGAAGGTAGCGAAGACGATTTCGAAGCGGCAGTGAAGTCGACAACTACGCCTCATATGTTCTGCAAGACTCTAACTGCTTCAGACACCAGCACTCACGGCGGGTTCTCTGTCCCTCGCCGAGCCGCCGAAGATTGCTTTCCTGCGTTGGACTACAATCAACAGAGGCCTTCACAAGAGCTCATGGCAAAGGATCTTCACGGGTTGGAATGGCGGTTCCGACATATTTATCGAGCAGGGCAGCCAAGAAGGCATTTGCTCACTACTGGATGGAGTGCATTTGTAAACAAGAGAAAGCTGACCTCCGGCGATGCAGTACTATTTCTTAGGGGTGAAGATGGCGACTTGAGGCTCGGAATAAGAAGAGCATCTCAGGTCAAAATCGGATCTTCTCCTCCCGATTTGTGCAGCCAGCAGCCAAGCCCCTGCAATCTTCGAAATATCATTGATTCTATATCGACGAGAAGTGTATTTAGTGTTCGATGCAATCCAAGGACCGGTTTGTCAGAGTTCATTGTACCTCTGCCTAGATTTTTGAAGAGCAATAGCCAATCTTTCTCCATCGGGATGAGGTTTAAGCTGCGTTTCGAGACGGAAGACGCTGCAGAACGAAGATGCACAGGTCGAATAGCCGGAATTAGCGATGTGGATCCGAGGAGATGGCCTGGCTCTAAATGGAGATGTTTAGTGGTGAGGTGGGACGAAGCGGAAACGAATAGACATGGCAGGGTTTCTCCATGGGAGATCGAGCCATCTGGTTCTCCTTGTGGATTGAATGGCTCGGTCATACCTGGTTTGAAGAGGACTAGGATCAAATTGTCTTTGGACAAAACCGAGTATCCGATTCCTAATGGGATTGGGCAATCAGACTTTGAGGAATCTCTAAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTTTTGATATAACGTACGAAGGTTTAGGAAATAAAAATCAACGACCGTCCGAAAGAAGGATGTTTTCTTCTCAAAGCATATGCATTCCGGAGTCTCGTGGATTCCCCAAGGTCTTTCAAGGTCAAGAAATATTTTCGAGCCGGCCATACAGAAGAACTGCACTAACTCCTGACGAGGCTCGAGATAATGGTGGACGACTAATCTTCGATGGTGTTCGAGTTCCTAACTCTAAACACGAATGGCCTCTCTCAATGCATAGTTCGAATTCGGATCAGCGATTATCGGCTTCGACTGCTCAGGCGTCTTCTCCGTCTTCTGTGTTGATGTTTCAACAAGCAAAAAATCTAGCTCCAGCATCTAGTTCAGCCTACAACAATGGAAGAAGTTCTCACTTTAAGAATGGTGTAAAGTCATCGTCTTCCTACGACAATGGATTAAGAAAAGCAGTTCAGTCGAAGGAGGATAATCAACTAACTCAACCTGGATCGAGTTTCAGCGGAAATCTGTGCAAAACCAACTGCAAACTATTCGGGTTTTCGTTGACAGAAGAAAAGCAGGTTTCCCAAATGGAGAAAGCCTTTCCATCTGCATTGAGTGCTGGACCTCCTTTCCTGGGAGGGCAATGCCATCCAAAACCTCCATTGATGAACAAACCAGTTGGAAGTAAAGTAAGCCATGCTTTCCTCTTTCCGGTTTGTGGGTCTGAGTAG 1995 47.32 MGGLIDLNTADDDDTPSFAGSPTSSSSASGSSSSASICLELWHACAGPLISLPKKGSVVVYLPQAHLEMVQDFPISATDLPPHLFCRVLDAEAGTDEVYARVSLIPESENFEQKLQEGEIHAEGSEDDFEAAVKSTTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPALDYNQQRPSQELMAKDLHGLEWRFRHIYRAGQPRRHLLTTGWSAFVNKRKLTSGDAVLFLRGEDGDLRLGIRRASQVKIGSSPPDLCSQQPSPCNLRNIIDSISTRSVFSVRCNPRTGLSEFIVPLPRFLKSNSQSFSIGMRFKLRFETEDAAERRCTGRIAGISDVDPRRWPGSKWRCLVVRWDEAETNRHGRVSPWEIEPSGSPCGLNGSVIPGLKRTRIKLSLDKTEYPIPNGIGQSDFEESLRFQKVLQGQEILGFDITYEGLGNKNQRPSERRMFSSQSICIPESRGFPKVFQGQEIFSSRPYRRTALTPDEARDNGGRLIFDGVRVPNSKHEWPLSMHSSNSDQRLSASTAQASSPSSVLMFQQAKNLAPASSSAYNNGRSSHFKNGVKSSSSYDNGLRKAVQSKEDNQLTQPGSSFSGNLCKTNCKLFGFSLTEEKQVSQMEKAFPSALSAGPPFLGGQCHPKPPLMNKPVGSKVSHAFLFPVCGSE 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2600430 2603982 - BLOR20391 Blo08g00221 64173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00221 664 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 28 653 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo08g00221 664 MobiDBLite consensus disorder prediction 548 572 - -
Blo08g00221 664 CDD B3_DNA 140 243 IPR003340 GO:0003677
Blo08g00221 664 SMART B3_2 142 245 IPR003340 GO:0003677
Blo08g00221 664 Gene3D - 306 377 - -
Blo08g00221 664 Gene3D - 140 244 IPR015300 -
Blo08g00221 664 MobiDBLite consensus disorder prediction 508 528 - -
Blo08g00221 664 Pfam Auxin response factor 272 350 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Blo08g00221 664 MobiDBLite consensus disorder prediction 509 528 - -
Blo08g00221 664 MobiDBLite consensus disorder prediction 14 30 - -
Blo08g00221 664 MobiDBLite consensus disorder prediction 11 30 - -
Blo08g00221 664 SUPERFAMILY DNA-binding pseudobarrel domain 132 244 IPR015300 -
Blo08g00221 664 PANTHER AUXIN RESPONSE FACTOR 3 28 653 - -
Blo08g00221 664 ProSiteProfiles B3 DNA-binding domain profile. 142 245 IPR003340 GO:0003677
Blo08g00221 664 Pfam B3 DNA binding domain 142 244 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo08g00221 Blo14g00413 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00221 Blo-Chr8:2600430 Blo13g01112 Blo-Chr13:33240094 1.30E-136 dispersed
Blo14g00413 Blo-Chr14:4588879 Blo08g00221 Blo-Chr8:2600430 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12723 PF02362 B3 3.60E-20 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00221 K14486 - zju:107412017 748.429