Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00229 ATGATGACTTCAATCGAGGAAACTGATGAAGGCTCTGAAAATAAAGGCAGTATGTGGGTTTTGAATCAGAAGCTTGATCAGCCAATGGATGAGGAAGCTGGGAGGCTTAGAAACATGTATAGAGAAAAGAAATTTTCGGCTTTGCTTCTTCTTCGGCTAGCATTCCAAAGTCTAGGAGTTGTCTATGGAGATTTGGGCACTTCTCCTTTATATGTTTTCTACAATACATTTCCTCATGGAGTGACCGATACAGAGGACATCATCGGGACTCTTTCATTGATTATATATTCGCTTACTCTTATCCCGCTCCTCAAATACGTCTTTATTGTGTGTAGAGCGAATGACAATGGCCAAGGCGGTACATTTGCGCTTTATTCGTTGCTATGCCGACATGCAAAAATAAAAACCATTCCTAACCAACACCGGACCGATGAGGAGCTGACAACGTATAGTCGCACTACTTTTCAAGAAAAATCATTTTCTGCAACAACTAAAAAATGGCTAGAGGGACATGCATCCCGAAGAAATTTGCTGCTTATACTTGTCCTTGTCGGCACTTGCATGGTTATTGGAGATGGTATTCTTACTCCCGCAATATCAGGTATTACTTCTTCGATCTCAGAGCCTGAGTTGCTTTCATGTTCATTAGTCTGCATAGATATATATACTCCATCAAAACACTTTTCTGCAACTTTTCTATCTGCTGCTGGTGGAATCAAGGTGGACTACCCCAGACTGAATAATGATGTAGTTGTGGTCGTAGCAGTTGTCATTTTAGTTGGACTATTTAGCGTGCAACACTACGGTACAGGTAAAGTTGGGTGGCTCTTTGCTCCAATTGTGTTGCTTTGGTTTCTTCTAATCGGTGGTATTGGTGCATTCAATGTCTGGAAATACGATTCCACGGTTCTAAGAGCGTTTTCGCCTGTATTCCTATATCACTACTTCAAAAGACGAGGAAGAGATAGTTGGAACTCTCTTGGAGGTGTTATGTTGAGCATAACTGGGACGGAGGCGCTCTTTGCCGACCTGGCCCACTTTCCAGTATCGGCTATACAAATTGCATTTACCTTGGTAGTATTCCCGTGTCTTCTTTCTGCTTACTCCGGACAAGCTGCCTATCTTATGAAACACGAGGAGCATGTTAAAGACGCCTTTTATCGGTCTATTCCAGAGAGTATATACTGGCCGGTATTCGCGGTAGCAACAGCAGCTGCTATTGTTGCCAGTCAGGCGACCATATCTGCAACTTTTTCGATAATTAAACAGGCTCTTGCCCTTGGTTGTTTTCCGAGAGTGAAAGTTGTCCACACTTCGAAGAAGTTTCTCGGGCAGATATATATTCCCGATATTAATTGGATTCTCATGATTCTTTGCATCGCTGTGACTGCTGGATTCAAAAATCAAAGTCAAATTGGAAATGCTTATGGGACGGCCGTCGTAATTGTTATGCTCGTAACGACATTGCTCATGATTCTGATCATGATATTAGTGTGGCGATGTCATTGGATTCTCGTCTTGATATTCACCATCTTGTCACTCATCGTAGAAGGAAGTTACTTTTCGGCCATGCTCTTCAAGATCAATCAAGGCGGATGGGTTCCTCTCGTGATTGCTGCTGCCTTTCTCCTGATCATGTACGTCTGGCATTACGGCTCTGTCAAACGATACGAGTTCGAGATGACTAGCAAGGTCTCGATGGCCTGGATCCTCGGGCTGGGCCCTAGTCTGGGGCTTGTCCGAGTGCCAGGAATCGGGCTCGTCTACACTGAGCTAGCAAGCGGAGTTCCGAGTATTTTTTCCCACTTCATCACGAATTTACCCGCCATTCATTCAGTCGTCGTTTTCGTCTGCGTGAAGTATCTTCCTGTCTTCACCGTTCCTGAAGAAGAGAGGTTCCTCGTGAAGAGGATCGGACCGAAGAACTTCCACATGTTTCGATGCGTTGCCAGATATGGGTACAAAGATCTCCACAAGAAGGACGATAAATTTGAGAAAAAGCTATTCGATAATCTCTTCCTCTATGTCCGGCTCGAGTCAATGATGGAAGGATGCTCAGACTCGGATGATTGCAGTCTCAACCAGCAAACTCAGCAATCAAGAGAAGAACTCTTGAATTATAATAACAATCAGAATCCAAAGTCTTCGAATGCAGATACGACATTTTCATCAGTGGACTCAATAGCGCCCCACAAATCTCCGGTGCGGTCGAACTCGACTGGGCAGTCGTCCGGTCAGGGGAACAGCCAGATGGAGGGTGATGAGCTCGAGTTTTTGAACAGTTCTAGAGATGCAGGGGTGGTGCACATTCTTGGAAACACAGTGGTGAGAGCAAGGAGAGACTCAAGGCTGTACAAGAAGTTAGCTGTTGATTATATTTATGCTTTTCTTAGGAAGATTTGCAGAGAAAATAGTGTCATTTTCAATGTGCCTCATGAGAGTCTGCTGAATGTCGGCCAAATTTTTTATGTATAG 2475 44.08 MMTSIEETDEGSENKGSMWVLNQKLDQPMDEEAGRLRNMYREKKFSALLLLRLAFQSLGVVYGDLGTSPLYVFYNTFPHGVTDTEDIIGTLSLIIYSLTLIPLLKYVFIVCRANDNGQGGTFALYSLLCRHAKIKTIPNQHRTDEELTTYSRTTFQEKSFSATTKKWLEGHASRRNLLLILVLVGTCMVIGDGILTPAISGITSSISEPELLSCSLVCIDIYTPSKHFSATFLSAAGGIKVDYPRLNNDVVVVVAVVILVGLFSVQHYGTGKVGWLFAPIVLLWFLLIGGIGAFNVWKYDSTVLRAFSPVFLYHYFKRRGRDSWNSLGGVMLSITGTEALFADLAHFPVSAIQIAFTLVVFPCLLSAYSGQAAYLMKHEEHVKDAFYRSIPESIYWPVFAVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTLLMILIMILVWRCHWILVLIFTILSLIVEGSYFSAMLFKINQGGWVPLVIAAAFLLIMYVWHYGSVKRYEFEMTSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPSIFSHFITNLPAIHSVVVFVCVKYLPVFTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDKFEKKLFDNLFLYVRLESMMEGCSDSDDCSLNQQTQQSREELLNYNNNQNPKSSNADTTFSSVDSIAPHKSPVRSNSTGQSSGQGNSQMEGDELEFLNSSRDAGVVHILGNTVVRARRDSRLYKKLAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 824
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2697974 2701986 - BLOR20399 Blo08g00229 64181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00229 824 PANTHER POTASSIUM TRANSPORTER 220 823 - -
Blo08g00229 824 PANTHER POTASSIUM TRANSPORTER 5 204 - -
Blo08g00229 824 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 220 823 IPR003855 GO:0015079|GO:0016020|GO:0071805
Blo08g00229 824 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 5 204 IPR003855 GO:0015079|GO:0016020|GO:0071805
Blo08g00229 824 MobiDBLite consensus disorder prediction 707 752 - -
Blo08g00229 824 Pfam K+ potassium transporter 230 656 IPR003855 GO:0015079|GO:0016020|GO:0071805
Blo08g00229 824 Pfam K+ potassium transporter 54 208 IPR003855 GO:0015079|GO:0016020|GO:0071805
Blo08g00229 824 TIGRFAM kup: potassium uptake protein 211 823 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00229 Blo-Chr8:2697974 Blo13g00835 Blo-Chr13:31028278 0 dispersed
Blo11g00073 Blo-Chr11:561884 Blo08g00229 Blo-Chr8:2697974 0 transposed
Blo14g00420 Blo-Chr14:4698601 Blo08g00229 Blo-Chr8:2697974 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00229 K03549 - vvi:100264706 1267.29