Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo08g00259 | ATGGCTTCTTATTCAGACGGTAGTCAGGCTGATGACCAGCAAAAACACGATGAATCTGAGAACAGGTCTTCATCTACATCGACTGGACTGTCTCATCATGGCATTTCGAATCCAAATCAGTATACAATGCCTGCGCAACTTGGAGTGGGTCATGCAATGGCACCATCGACTGATCCATATCCCGATCCTTACTACAGAAGCATCTTTGCTCCCTATGATGGACAGCCATATCCTACCCAGCCTTATGGTGGGCAACCTATGGTTCATTTCCAGTTGATGGGAATTCAGCAGGCTGGAGTGCCTTTGCCATCAGATGCAGTGGAGGAGCCTGTCTTTGTGAATGCCAAACAGTATCATGGCATCATGCGGAGGCGTCAATCTCGTGCAAAAGCAGAATCAGAAAATAAAGTTTTGAAGTCTAGGAAGCCATATTTGCACGAATCTCGGCATTTACATGCATTGAAACGAGCTAGAGGATGTGGCGGTAGGTTTCTTAAGGCGAAGGAAAATGAAAACCAATCAAATGAGGTGACATCAGGAGACGAATCACAAACCAACTTACGCCTTAACAACAACAAAAACAATCCTGCTTCCTCGGACAGTGCTTCCTAA | 612 | 45.59 | MASYSDGSQADDQQKHDESENRSSSTSTGLSHHGISNPNQYTMPAQLGVGHAMAPSTDPYPDPYYRSIFAPYDGQPYPTQPYGGQPMVHFQLMGIQQAGVPLPSDAVEEPVFVNAKQYHGIMRRRQSRAKAESENKVLKSRKPYLHESRHLHALKRARGCGGRFLKAKENENQSNEVTSGDESQTNLRLNNNKNNPASSDSAS | 203 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3301451 | 3303012 | + | BLOR20429 | Blo08g00259 | 64211 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo08g00259 | 203 | MobiDBLite | consensus disorder prediction | 125 | 144 | - | - | |
Blo08g00259 | 203 | ProSitePatterns | NF-YA/HAP2 subunit signature. | 112 | 132 | IPR018362 | GO:0003677|GO:0016602 | |
Blo08g00259 | 203 | MobiDBLite | consensus disorder prediction | 23 | 44 | - | - | |
Blo08g00259 | 203 | Gene3D | - | 107 | 169 | - | - | |
Blo08g00259 | 203 | MobiDBLite | consensus disorder prediction | 1 | 55 | - | - | |
Blo08g00259 | 203 | PRINTS | CCAAT-binding transcription factor subunit B signature | 141 | 164 | IPR001289 | GO:0003700|GO:0006355 | |
Blo08g00259 | 203 | PRINTS | CCAAT-binding transcription factor subunit B signature | 110 | 132 | IPR001289 | GO:0003700|GO:0006355 | |
Blo08g00259 | 203 | MobiDBLite | consensus disorder prediction | 164 | 203 | - | - | |
Blo08g00259 | 203 | Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B | 109 | 164 | IPR001289 | GO:0003700|GO:0006355 | |
Blo08g00259 | 203 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-7 | 4 | 186 | - | - | |
Blo08g00259 | 203 | SMART | cbf3 | 106 | 167 | IPR001289 | GO:0003700|GO:0006355 | |
Blo08g00259 | 203 | MobiDBLite | consensus disorder prediction | 171 | 203 | - | - | |
Blo08g00259 | 203 | ProSiteProfiles | NF-YA/HAP2 family profile. | 107 | 167 | IPR001289 | GO:0003700|GO:0006355 | |
Blo08g00259 | 203 | PANTHER | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED | 4 | 186 | IPR001289 | GO:0003700|GO:0006355 | |
Blo08g00259 | 203 | MobiDBLite | consensus disorder prediction | 125 | 146 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g01379 | Blo-Chr3:40225072 | Blo08g00259 | Blo-Chr8:3301451 | 1.80E-39 | dispersed | |
Blo08g00103 | Blo-Chr8:1083191 | Blo08g00259 | Blo-Chr8:3301451 | 6.72E-30 | dispersed | |
Blo08g00259 | Blo-Chr8:3301451 | Blo14g00284 | Blo-Chr14:2845175 | 2.00E-32 | dispersed | |
Blo14g00448 | Blo-Chr14:5297558 | Blo08g00259 | Blo-Chr8:3301451 | 4.47E-119 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12725 | PF02045 | CBFB_NFYA | 1.30E-26 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo08g00259 | K08064 | - | jre:109011209 | 280.026 |