Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00267 ATGGAGAGTCTTCTGAGTAAAGGGGTTTTTTGTGGGCAAGAACAAATAGAGCAACTTTCGAGAGATGACAGCCATTACAGTTTGACTAGTGGCGTTTTGCCGCCGCTTGGAGCCAGAAGCAACCGGAGAGCCAAGCTCCGGTGGTTTATTATTTCGCCGTCTGACCGCAGATACAGGTTCTGGGAGACATTTCTCATCGTTCTTGTGGTTTATACGGCTTGGGCATCGCCTTTTGAATTCGGATTTCTGAGAAAACCAGAGGGCCCTCTCGCCATTGTTGATAATGTTGTTAATGGATTCTTTGCCATTGACATTATTCTAACATTCTTTGTTGCTTACTTGGACAAAACCACCTATCTGCTTGTTGATGAACCAAAGAAGATTGCCTGGAAATATACAAGTTCTTGGTTAGCCTTTGATGTCATTTCGACAATTCCTTTCGAAGTTGCGGAAAAGATCATCCCTTCTGCATTTCAATCTTATGGCTTCTTCAACATGCTTCGCCTTTGGCGTCTCCGTCGAGTTAGCAAGCTTTTCTCGAGATTGGAGAAGGATAGACATTATAACTACTTCTGGGTCAGATGTGCAAAGCTTGTTTGTGTTACCCTTTTCGCAGTTCATACCGCAGGATGCTTCTACTATCTACTTGCAGCCAGGTATCGTGACCCGAAAAAGACATGGATCGGCGCATCGGATGAGAATTTCCTTGAAGAAAGCTTGTGGATCAGATATGTCACTTCCATTTATTGGTCTATCACTACTCTTACAACTGTTGGATATGGCGATTTGCATCCAGTGAATATAAGGGAAATGATTTTTGACATATTCTATATGCTTTTCAATCTTGGTTTAACTGCATACTTGATCGGAAATATGACCAACTTGGTCGTTCACGGGACCAGTAGAACTAGGAGATTCAGAGACACGATACAAGCTGCTTCTAGTTTTGCTCAGAGGAATCAACTTCCTCCACGCTTGCAAGATCAAATGCTTGCACATTTGTGTTTGAAGTTTAGAACAGATTCAGAAGGACTTCAACAGCACGAAACTCTAGATTCTCTCCCGAAAGCCATACGATCTAGCATTTCGCATTATCTGTTCTACTCTCTCATCGATAAAGTCTACTTATTTCGAGGCGTCTCGAACGACTTGCTCTTCCAACTGGTCTCGGAGATGAAAGCCGAGTATTTTCCTCCGAAAGAAGACGTCATCTTGCAAAATGAAGCCCCCACCGACTTCTATATTCTTGTCACCGGAGCTGTGGATCTACTCGATCTAAAAAATGGAGTGGAACACCATTCTCAAAGAGATTTACTTTTGATTAGAGTTATTTTTCTTAGCATTCATACTCATTTTATAAGAAATGATTATCATTTGAAGGAACAAAGGGACCCAATAATGGATGGTATTTTGCTGGAGACAGAGAACATGTTGGCTCGAGGGCGAATGGACCTACCGCTCACTCTTTGCTTTGCAGCCATGAGAGGAGATGATTTGCTCTTGCACCAGCTTTTGAAAAGGGGGTTGGATCCTAATGAATCTGATAACAATGGCAGATCAGCGCTGCACATTGCAGCATCCAAAGGAAGTGAAAACTGTGTTCTTCTGTTGCTTGATTATGGTGCAGATCCAAACTGTAGAGATTCTGAGGGGAATGTACCGCTATGGGAAGCCATAGCCGGAGGCCACGAACAAGTCATCCAGCTTCTCAAAGATAACGGAGCAAATCTAGAGAGCGGAGACATGGCCCAATTCGCCTGCACTGCTACCGAGCAAAACAATCTGACCCTTCTCAAAGAAATCGTTCGGCACAGTGGTGACATCACCGTTCCGAAGAGCAATGGCTCTACCGCCCTCCACGTCGCCGTCTGCGAAGACAATGTTGAAATCGTCAAGTTCCTCCTCGCCCACGGCGCCGGAGTGGATATCCCGGACATCCACGGATGGACTCCTAGAGATCTGGCTGACCAACAAGGCCATGAAGAAATCAAAGCCCTTTTCGCTCGTCACAAACATCCCAAGGCCCAGTCCGTTGTCGCCATTTTTGACGAGCAAAGAGAAAATTGTTTCCTCGGAAGGTTCAAAAGCGAGCCAGTGATACGTCCTTTTCATACGGAAGTCTCTTTTGCCGACGGAGACTGGAACAACCACCGCCCGCGGCGGAAAACTAGTAACTTCCACAACTCACTGTTCGGAATAATGTCAGCGGCAAACTCCAGGGACACAGACCTCTTCTCGATGAGTCAAACAGAGAATGCTCCGATACCAGACGACAATCCAACAAGAGTGACGATTTGTTTCCCAGAGATCAGGAAAGTGAAAGGTAAGCTGGTGCTTTTGCCGGGGACAATGAGGGAGCTAATGGAGATGGGGAAGAAGAAATTCGGGGTGGAAGCGGCCAGAATTGTGAGCAAAGAAGGAGCTGAAATAGAAAATATAGAAGTAATAAGGGACGGGGATAAGCTTCAGTTTGTTGGCTATGGCGATGAAACGAGGAAATGCAGTCAAAGTAATGGCGGATTTCTAGCTTCTTGCTCGTCACTTTGA 2547 45.27 MESLLSKGVFCGQEQIEQLSRDDSHYSLTSGVLPPLGARSNRRAKLRWFIISPSDRRYRFWETFLIVLVVYTAWASPFEFGFLRKPEGPLAIVDNVVNGFFAIDIILTFFVAYLDKTTYLLVDEPKKIAWKYTSSWLAFDVISTIPFEVAEKIIPSAFQSYGFFNMLRLWRLRRVSKLFSRLEKDRHYNYFWVRCAKLVCVTLFAVHTAGCFYYLLAARYRDPKKTWIGASDENFLEESLWIRYVTSIYWSITTLTTVGYGDLHPVNIREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRRFRDTIQAASSFAQRNQLPPRLQDQMLAHLCLKFRTDSEGLQQHETLDSLPKAIRSSISHYLFYSLIDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLDLKNGVEHHSQRDLLLIRVIFLSIHTHFIRNDYHLKEQRDPIMDGILLETENMLARGRMDLPLTLCFAAMRGDDLLLHQLLKRGLDPNESDNNGRSALHIAASKGSENCVLLLLDYGADPNCRDSEGNVPLWEAIAGGHEQVIQLLKDNGANLESGDMAQFACTATEQNNLTLLKEIVRHSGDITVPKSNGSTALHVAVCEDNVEIVKFLLAHGAGVDIPDIHGWTPRDLADQQGHEEIKALFARHKHPKAQSVVAIFDEQRENCFLGRFKSEPVIRPFHTEVSFADGDWNNHRPRRKTSNFHNSLFGIMSAANSRDTDLFSMSQTENAPIPDDNPTRVTICFPEIRKVKGKLVLLPGTMRELMEMGKKKFGVEAARIVSKEGAEIENIEVIRDGDKLQFVGYGDETRKCSQSNGGFLASCSSL 848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3401762 3406521 + BLOR20437 Blo08g00267 64219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00267 848 ProSiteProfiles Ankyrin repeat profile. 517 549 IPR002110 GO:0005515
Blo08g00267 848 ProSiteProfiles Ankyrin repeat profile. 614 646 IPR002110 GO:0005515
Blo08g00267 848 Pfam KHA, dimerisation domain of potassium ion channel 762 822 IPR021789 -
Blo08g00267 848 Pfam Ankyrin repeats (3 copies) 489 579 IPR002110 GO:0005515
Blo08g00267 848 Pfam Ankyrin repeats (3 copies) 589 667 IPR002110 GO:0005515
Blo08g00267 848 ProSiteProfiles Ankyrin repeat region circular profile. 550 581 - -
Blo08g00267 848 Gene3D - 59 297 - -
Blo08g00267 848 Pfam Ion transport protein 59 303 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Blo08g00267 848 Gene3D - 485 669 IPR036770 -
Blo08g00267 848 ProSiteProfiles Ankyrin repeat profile. 550 582 IPR002110 GO:0005515
Blo08g00267 848 ProSiteProfiles Ankyrin repeat region circular profile. 517 548 - -
Blo08g00267 848 PANTHER K+ TRANSPORTER 1-RELATED 458 829 - -
Blo08g00267 848 PANTHER K+ TRANSPORTER 1-RELATED 13 432 - -
Blo08g00267 848 SUPERFAMILY Voltage-gated potassium channels 53 297 - -
Blo08g00267 848 CDD CAP_ED 376 423 IPR000595 -
Blo08g00267 848 ProSiteProfiles KHA domain profile. 762 842 IPR021789 -
Blo08g00267 848 PRINTS EAG/ELK/ERG potassium channel family signature 71 78 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo08g00267 848 PRINTS EAG/ELK/ERG potassium channel family signature 244 261 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo08g00267 848 PRINTS EAG/ELK/ERG potassium channel family signature 94 104 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo08g00267 848 PRINTS EAG/ELK/ERG potassium channel family signature 105 114 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo08g00267 848 PRINTS EAG/ELK/ERG potassium channel family signature 270 281 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo08g00267 848 PRINTS EAG/ELK/ERG potassium channel family signature 288 297 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo08g00267 848 ProSiteProfiles cAMP/cGMP binding motif profile. 376 424 IPR000595 -
Blo08g00267 848 SUPERFAMILY Ankyrin repeat 488 670 IPR036770 -
Blo08g00267 848 SMART cnmp_10 376 494 IPR000595 -
Blo08g00267 848 Gene3D Jelly Rolls 343 447 IPR014710 -
Blo08g00267 848 ProSiteProfiles Ankyrin repeat region circular profile. 614 645 - -
Blo08g00267 848 SMART ANK_2a 517 546 IPR002110 GO:0005515
Blo08g00267 848 SMART ANK_2a 484 513 IPR002110 GO:0005515
Blo08g00267 848 SMART ANK_2a 581 610 IPR002110 GO:0005515
Blo08g00267 848 SMART ANK_2a 550 579 IPR002110 GO:0005515
Blo08g00267 848 SMART ANK_2a 614 643 IPR002110 GO:0005515
Blo08g00267 848 PANTHER POTASSIUM CHANNEL AKT1 458 829 IPR045319 GO:0005249|GO:0006813
Blo08g00267 848 PANTHER POTASSIUM CHANNEL AKT1 13 432 IPR045319 GO:0005249|GO:0006813
Blo08g00267 848 SUPERFAMILY cAMP-binding domain-like 301 430 IPR018490 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo08g00267 Blo14g00462 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00941 Blo-Chr1:22824649 Blo08g00267 Blo-Chr8:3401762 0 dispersed
Blo08g00267 Blo-Chr8:3401762 Blo12g01092 Blo-Chr12:28596716 6.13E-150 dispersed
Blo07g01382 Blo-Chr7:33916990 Blo08g00267 Blo-Chr8:3401762 5.54E-15 transposed
Blo14g00462 Blo-Chr14:5703453 Blo08g00267 Blo-Chr8:3401762 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00267 K21867 - zju:107432387 1253.04