Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo08g00318 | ATGCACAAAGTGATAGCAGAAGAGTGGGAGCAGGAAATAGTAAATGGTTATGAATGGCAAAGGAGGTGGGAAGTGGCATTCTCTAATGGTTTTGAAAGGACGGACAAGGAGGTCATAACAGAGGCAGTGGCAGCTGACATGGTTGGATCAACCGCGGTTGTGGTGGTTGTGTCTAGCTGCCAAATAATTGTCTCCAATTGTGGCGACTCAAGGGCAGTGCTTTGCAGGCAGACTCACACAATCCCCCTCACCGTTGATCAAAAGCCTGATAGAGAGGACGAGCTCATCAGAATTGAAGGACTGGGAGGGAAAGTCATAAACTGGATGGGTGCTAGAGTACTTGGAGTTCTTGCCATGTCGAGAGCCATAGGTGATCGGTATCTACGACCATGGATTATTCCAGTTCCTGAGATTACTTTTATGACCAGAAGTGACGAGGATGAATGCGTTATATTAGCGAGTGATGGGCTATGGGATGTAATGACCAATGAAGAGGTGGGGGAGGTGACTCGTCGATTTTTAAGACGGCGAGCAAGATCTGCAACGATCAACGAGACGTCTATGGCACAAGCTGTTGCAGATAATCTCACCGAAATAGCATTTGGAAGAAACAGCTGTGATAACATTTCCGTTGTTGTCGTCGATCTGAAGCCAAGACGAACATGGCCAAAGAGTTCTGTTTTAGTCTCTCATTGA | 696 | 46.7 | MHKVIAEEWEQEIVNGYEWQRRWEVAFSNGFERTDKEVITEAVAADMVGSTAVVVVVSSCQIIVSNCGDSRAVLCRQTHTIPLTVDQKPDREDELIRIEGLGGKVINWMGARVLGVLAMSRAIGDRYLRPWIIPVPEITFMTRSDEDECVILASDGLWDVMTNEEVGEVTRRFLRRRARSATINETSMAQAVADNLTEIAFGRNSCDNISVVVVDLKPRRTWPKSSVLVSH | 231 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 4623836 | 4624920 | + | BLOR20488 | Blo08g00318 | 64270 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo08g00318 | 231 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 216 | IPR001932 | - | |
| Blo08g00318 | 231 | PANTHER | PROTEIN PHOSPHATASE 2C 6-RELATED | 1 | 221 | - | - | |
| Blo08g00318 | 231 | CDD | PP2Cc | 1 | 216 | IPR001932 | - | |
| Blo08g00318 | 231 | Gene3D | - | 1 | 225 | IPR036457 | - | |
| Blo08g00318 | 231 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 221 | - | - | |
| Blo08g00318 | 231 | Pfam | Protein phosphatase 2C | 23 | 209 | IPR001932 | - | |
| Blo08g00318 | 231 | SUPERFAMILY | PP2C-like | 1 | 218 | IPR036457 | - | |
| Blo08g00318 | 231 | SMART | PP2C_4 | 3 | 214 | IPR001932 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo08g00318 | Blo-Chr8:4623836 | Blo18g00273 | Blo-Chr18:2890480 | 8.60E-69 | dispersed | |
| Blo08g00318 | Blo-Chr8:4623836 | Blo17g00280 | Blo-Chr17:2952936 | 4.22E-67 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo08g00318 | K14497 | - | gmx:100793293 | 340.502 |