Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00318 ATGCACAAAGTGATAGCAGAAGAGTGGGAGCAGGAAATAGTAAATGGTTATGAATGGCAAAGGAGGTGGGAAGTGGCATTCTCTAATGGTTTTGAAAGGACGGACAAGGAGGTCATAACAGAGGCAGTGGCAGCTGACATGGTTGGATCAACCGCGGTTGTGGTGGTTGTGTCTAGCTGCCAAATAATTGTCTCCAATTGTGGCGACTCAAGGGCAGTGCTTTGCAGGCAGACTCACACAATCCCCCTCACCGTTGATCAAAAGCCTGATAGAGAGGACGAGCTCATCAGAATTGAAGGACTGGGAGGGAAAGTCATAAACTGGATGGGTGCTAGAGTACTTGGAGTTCTTGCCATGTCGAGAGCCATAGGTGATCGGTATCTACGACCATGGATTATTCCAGTTCCTGAGATTACTTTTATGACCAGAAGTGACGAGGATGAATGCGTTATATTAGCGAGTGATGGGCTATGGGATGTAATGACCAATGAAGAGGTGGGGGAGGTGACTCGTCGATTTTTAAGACGGCGAGCAAGATCTGCAACGATCAACGAGACGTCTATGGCACAAGCTGTTGCAGATAATCTCACCGAAATAGCATTTGGAAGAAACAGCTGTGATAACATTTCCGTTGTTGTCGTCGATCTGAAGCCAAGACGAACATGGCCAAAGAGTTCTGTTTTAGTCTCTCATTGA 696 46.7 MHKVIAEEWEQEIVNGYEWQRRWEVAFSNGFERTDKEVITEAVAADMVGSTAVVVVVSSCQIIVSNCGDSRAVLCRQTHTIPLTVDQKPDREDELIRIEGLGGKVINWMGARVLGVLAMSRAIGDRYLRPWIIPVPEITFMTRSDEDECVILASDGLWDVMTNEEVGEVTRRFLRRRARSATINETSMAQAVADNLTEIAFGRNSCDNISVVVVDLKPRRTWPKSSVLVSH 231
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 4623836 4624920 + BLOR20488 Blo08g00318 64270
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00318 231 ProSiteProfiles PPM-type phosphatase domain profile. 1 216 IPR001932 -
Blo08g00318 231 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 1 221 - -
Blo08g00318 231 CDD PP2Cc 1 216 IPR001932 -
Blo08g00318 231 Gene3D - 1 225 IPR036457 -
Blo08g00318 231 PANTHER ALPHABET, ISOFORM E-RELATED 1 221 - -
Blo08g00318 231 Pfam Protein phosphatase 2C 23 209 IPR001932 -
Blo08g00318 231 SUPERFAMILY PP2C-like 1 218 IPR036457 -
Blo08g00318 231 SMART PP2C_4 3 214 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00318 Blo-Chr8:4623836 Blo18g00273 Blo-Chr18:2890480 8.60E-69 dispersed
Blo08g00318 Blo-Chr8:4623836 Blo17g00280 Blo-Chr17:2952936 4.22E-67 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00318 K14497 - gmx:100793293 340.502