Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00324 ATGGAGGCATCTGGATGTTTTTCCCGTCTTTTGCCAACACGTGCCGACTTAGACTTTTGTATATTACTTCCAATGAAGTATCATTGTGCATATGATCTTACTTCCATTATCTTTTGCAATATCTATCAATCTTTGTGGAAACGCAAGGTTTTGACTTATAAGGAACTGCTGAAGCCCAATGAGATTGCTGACGTTCTCAAGGACTTTGACGAACCAGGTCATCTTGCTCCCACTGGTTTACACCTTGGGGCTGCAAAATACATGGTAATACAAGGAGAACCCGGAGCTGTCATCCGTGGGAAGAAGGGATCTGGAGGAATCACAATCAAGAAGACTGGACAAGCACTAATTTTTGGCATCTACGAAGAGCCCGTAGCTCCCGGACAATGCAACATGGTAGTCGAGAGGTTGGGGGATTACCTGATTGACCAAGGTCTCTAA 441 44.44 MEASGCFSRLLPTRADLDFCILLPMKYHCAYDLTSIIFCNIYQSLWKRKVLTYKELLKPNEIADVLKDFDEPGHLAPTGLHLGAAKYMVIQGEPGAVIRGKKGSGGITIKKTGQALIFGIYEEPVAPGQCNMVVERLGDYLIDQGL 146
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4882509 4883576 - BLOR20494 Blo08g00324 64276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00324 146 SMART prof_2 25 146 IPR005455 GO:0003779
Blo08g00324 146 Pfam Profilin 57 145 IPR005455 GO:0003779
Blo08g00324 146 CDD PROF 44 145 IPR005455 GO:0003779
Blo08g00324 146 SUPERFAMILY Profilin (actin-binding protein) 57 145 IPR036140 -
Blo08g00324 146 PRINTS Plant profilin signature 132 145 IPR005455 GO:0003779
Blo08g00324 146 PRINTS Plant profilin signature 99 114 IPR005455 GO:0003779
Blo08g00324 146 PRINTS Plant profilin signature 67 81 IPR005455 GO:0003779
Blo08g00324 146 PRINTS Plant profilin signature 86 95 IPR005455 GO:0003779
Blo08g00324 146 PRINTS Plant profilin signature 119 132 IPR005455 GO:0003779
Blo08g00324 146 Gene3D Dynein light chain 2a, cytoplasmic 29 146 - -
Blo08g00324 146 PRINTS Profilin signature 55 75 IPR005455 GO:0003779
Blo08g00324 146 PRINTS Profilin signature 128 145 IPR005455 GO:0003779
Blo08g00324 146 PRINTS Profilin signature 79 93 IPR005455 GO:0003779
Blo08g00324 146 PRINTS Profilin signature 115 128 IPR005455 GO:0003779
Blo08g00324 146 PANTHER PROFILIN 44 146 - -
Blo08g00324 146 PANTHER PROFILIN 44 146 IPR005455 GO:0003779
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00529 Blo-Chr1:5842737 Blo08g00324 Blo-Chr8:4882509 1.72E-16 wgd
Blo14g00527 Blo-Chr14:7522515 Blo08g00324 Blo-Chr8:4882509 1.14E-49 wgd
Blo16g01002 Blo-Chr16:38385098 Blo08g00324 Blo-Chr8:4882509 1.61E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00324 K05759 - jre:109018861 163.31