Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00343 ATGGATAACGCAGTTGAAGAAGAATTCTCATTGGGAAGTCAAAGTGTTATTGAACCGAAGTTGACCTGCACTAGGCAGTCCACCCTGAATCAAAATTTGTGGTCTAAGGTTTGTATTGCAAGCTTCAGTAGATCCATTAACTTTACTCCCTTCTCAAAGTCGACTATCAGGCTTGCCTCCGGGCAGGTTAACAAATCAGCTGGTCCATTCGATGCACTTCTCTGCGTCGGGCAGTTCTTTCCGGAAAATGTTGAACAGCTCGAGGAGTTCATAGACTATGTTGTCGAAGGTCGCTTCCAAATCCCCCTCCCTACCTACTTTATCGGCGACTATGGAGTCGGCGTGGCTAAAGTGTTGCTTGCTGCTTCTATGGATTCGGCCAATCAAGGTTTCAAAATGGACGGGTTGAAGATATGCCAGAATCTGTACTGGTTGAAAGGCAGTGGCAAGTTTAATCTCCACGGATTATCTGTGGCTTATCTATCTGGTAGACAATCTTTGAATGATCAACAATATGGAGTATATAGTCAAGATGACGTTGATGTGCTCAGAGCCATAGCAGAGGAGCCGGGAATAATTGACTTGTTTCTCACATATCCTTTTTTTACCATGAAATTTTTGTCCGCTTCAACAACGGATATTCCAGCTGGAATCTCAGACACATTGGGCTGTGATTCTACCATATCTGAGTTAGTAGCGGAGATCAAACCCCGCTATCACATTGCAGGTTCAAAAGGCCTATTTTATGCTCGTGAGCCCTACTCTAACATTGAGGCCTTACATGTAACCCGCTTCTTTGGTCTCGCATCTGTTGGAAATAAAGAGAAACAGAAATTTATCCATGCTATTTCTCCTACTCCAGCATCTACCATGTCTGCCATGGAAATTAGCATGAAGTCAACGACTACTACACTATCTCCTTACACAGTTGTTGAAAAAAAAGCTGAGTCCAAAGAATTTTTGAAGAGGCTTGGTGACAGTCCTTCAGAGTCACAATATTGGAGATATGACGACCCTAAAAAACGACAGAAACATGGAGCTGGAGATAGTGATCTTCTGTGTTTTAAATTTATGTCAACTGGATCTTGTCCAAGAGGAGAGACATGCAGGTTCCAGCATGATGTAGCCACACATGAGCAATATCTGAGAGGTGTTTGTTTTGATTTCCTTATCAAGGGTAAATGTGAAAGAGGTCCAGAATGCAAATTTAAGCATGTTTTACAAAATGAAGGTGAAATTAATTCTCAGAAGGGCAGTACGTGTGAACCTGCTGGCACAAACAGGTCTGAAGAGTGTTGGTTCTGTCTTTCAAGTGCAAATGTAGAATCACATCTAATTATCAGTATAAGTGAAAGTTACTACTGTGCATTGGCTAAAGGGCCCCTTGTTCATGACCATGTACTGATAGTACCTATTGAGCATTTGCCTACTACACTTGCCTTGGCTTCGGAGAGTGAAATTGAGCTTGGCAGATTCCAGAGTAGTCTAAGGAAGTGCTACAAGAAACAAGGGATGGAGGTTGTATTCTTTGAGTGGGTTTCCAAGCGTATTAGGCATGCTAATCTTCAGGTTATTCCTATTCCAGCAGCCAGAGCACCTGTAGTTCAGAATATATTTGACTTAGCTGCTCAAAAGTTGGGATTCAAGTTTGAGACTGTTCACATGATTTCAGTCAATGATAGTTCTGTTGGGAGGAAAGCATTGAAGGAAAAATTTGACGGTAGTTGCAGTTTCTTCTATGTTGAATTACCAGAGGGTAAAGTTCTATTGCATTTGGCTGAGGAGAATGAAAAATTTCCGGCCCAATTTGGACGTGAGTTGTGTGTGGAGATTTTGAGATTTAGGTTTGGCTGGGACGAGGATGGAGATGCCTCTGATGCTTCAGCTGGATCGGTTTTGCCACCACCACTTGCATTATTGCATTCTCTGACAGCATTGCCACCCACGACTAGTAAAGGGGCAGTGGCACCACTGTCTGGATCATCCCCACCCCATAATCTATCTCCACAACCCTTTAATGTTCAAAGTCAAGTCCCTTCGATAGCACCAAGTGAAGCTCAGACGAAAGCACCCATCGAAAACCCGCCCTTTTCAGTTGCTCCAGCTCCATTTGAAAGTCCTTCGAAGATTTTACCCCAATATGCACCATCCAGACCTCCAACGGCCGATGTAGGAAATATGGATGGTCCCATGGCCCCTTTCGCTGGGCCACTTGCACCAGAGCATGATATTCCTCCATCTTTTGCTACTTCGCCAACCACTCCCTCTAAGAAGATGATCAAAGTGCCAGCATCTGCTCCTTATATCAACATGCCCAAAGAAGCACCACGGACGTATAAAGGACCTTCCCCGGACAGGTCCATGAGGCACTCACATTATGCTCATCCTCCATTTTCATCTCCTAACCCTCCTTTCAGTCAAAGAGATTATCGTCCCGCTTCGTCTCCGGCAATCTCATATACCAAGCATAACCATTCGAGAAGTAAAATCATCAGTCCTCCACCTGCTCCATCATACCCTGTTTCTTCTCAAACACCAGCTGTTTCTCCATCGTTTCTTCCCAGAAGCAAGACAAGGGACCATTCCCCTACACCATCCAATTCAGCCCCTCGAATTTCTCCATTCCATTCTTTTCCTCTACCTCCTAGGCATGTTTCACCAACTCCTTATCCGTCTCAAAATGTTCCCTCTGGCACTGCACATGTGCCCGTTTCTCCTTCTAAGGTTTGGCCCGCGAAGCCCTCGATGAATAGTCCAAAAACACCACTACTACCACCATTAAAAGCATTTCCTTCTCCACCTCCCAATCCAGATTGTTTAGGGACCATTTGCACAGACCCCTATACAAACACTCTCTCGAACTCACCATGCGGCTGTGCGTTGCCGATCCAAGTTGGCCTTCGGCTCGGTATCTATCTTTATACCTTCTTTCCTCTAGTCTCGGAGATGGCTAAGGAAATTGCTGCTTCCATTTTTCTGAAACAAAGCCAAGTTCGCATAATTGGAGCAAGTGCAGCAAACCAGCAAGCTCAAAAAACTGTCGTTCTTATTGACTTGGTTCCTCTGGGGGAAAAGTTTGACTTCACTACAGCCTTGTTGACTTATCATCGGTTCTGGCTTAAACAAGTTGCCATAAAAGCTTCCTTCTTTGGTGATTATGAAGTATTGTATGTTAAATATCCAGGTTTACCTCCGTCTCCTCCCGGAGTGCCTGTTATAAATAGTCAGCCTTATTCAAGAAATAATAATAATAACAATAACAACAATGGAAGGACAATAAAGCCGATTGGAGTTGATGTACATAGTAGACGACATAATGATCGGTTTACCGGTGGCATGATTGCTATCATAGCTCTCTCGACCCTTTTAGCCGTGGTTTTTTGCATAGCTGGTGCTTGGAATTTTGTGTTCAGACAAAGAGACTGTTTTAGGCCACAAAAGGCGGTTCCAGAGGCTTTGCTATCTTCCCTTTCTAAGCCATCAGGCATGGCTGGCTCGACAATGGGAAGTATGCGCAGTTATGTTTCTTTATCACTCGAGTCTAGTATGGCAACATATACGGGATCTGCCAAGACATTTAGTGCAAATGACATGGAGAGGGCCACTAACCATTTCGATCCTTCAAGAATACTTGGGGAAGGTGGCTTCGGATGTGTTTACAGTGGCGTTCTTGAAAGCGGAACGAAAGTGGCAGTAAAAGTTTTAAAGAGGGACGATCACCATGGCGGCCGAGAATTCTGTGCCGAAGTCGAAATGCTTAGCCGTCTCCATCATCGGAATTTGGTAAAGTTAATCGGCATATGCACGGAGGATCATATGCGCTGCCTCGTCTATGAACTCATTCCAAACGGCAGCGTTGAATCTCATTTACATGGAGTTGACAAGGAAAAAACTCCCCTCGATTGGATTACTCGTGTGAAGATAGCGCTTGGAGCTGCAAGGGGTCTGGCTTATCTCCACGAGGATTCAAGCCCTCGAGTCATACATCGGGACTTCAAAGCCAGCAACATTTTGCTAGAATGCGATTTCACTCCGAAAGTATCCGACTTTGGTTTGGCTCGAACGGCAATGGATGAGGAAAGCAGACACATATCGACACGAGTCATGGGAACTTTTGGGTATGTTGCTCCTGAGTATGCAATGACTGGCCATCTTCTCGTGAAGAGCGATGTTTACAGCTATGGAGTTGTCCTGCTCGAACTTCTAACAGGAAGAAAACCCGTAGACATGTCACAACCACCCGGCCAAGAAAACCTGGTCGCGTGGGCCCGTTCACTCCTCACGAGTAGAGAAGGCTTGGAATTGATAATCGATAAATCTTTGGGTTCTAATGCTCCTTTTGACAGTATTGCCAAAGTGGCTGCTATTGCTTCTATGTGTGTGCAGCCGGAAGTATCGAATCGTCCTTTCATGGGGGAGGTCGTTCAAGCTCTTAAACTAGTCTGCAACGAGTGTGACGAAAAAAGAGAAGCAGGGTCAAGAGGTTCGAGCCGGGAAGAGATCTCGATTGACATGGATGCGGACCCCGTTCACCGGGGCTTGAGACAATATCCTCATTCTTTTTATGGCCAATACTCACCACCTAACTTTGACAATGGGATGGATTCTGAAACAAGGCTGTCGATTTCAGAATTGTTGAGTTCATCTGCGAGATTTCAAATGCAGGAGTCTAGATCGCTTCAAAGGCAATCAAGCTCGGGTCCATTGAGTTCGAGAAGAGGCAGGCCGATTTGGCAAAGGATGAGATTTTCTAGTGAAAGTGTGAGCGAAAGCAGATTCAATACCAGATTTTGGCCGGGATCAAACTGA 4809 44.89 MDNAVEEEFSLGSQSVIEPKLTCTRQSTLNQNLWSKVCIASFSRSINFTPFSKSTIRLASGQVNKSAGPFDALLCVGQFFPENVEQLEEFIDYVVEGRFQIPLPTYFIGDYGVGVAKVLLAASMDSANQGFKMDGLKICQNLYWLKGSGKFNLHGLSVAYLSGRQSLNDQQYGVYSQDDVDVLRAIAEEPGIIDLFLTYPFFTMKFLSASTTDIPAGISDTLGCDSTISELVAEIKPRYHIAGSKGLFYAREPYSNIEALHVTRFFGLASVGNKEKQKFIHAISPTPASTMSAMEISMKSTTTTLSPYTVVEKKAESKEFLKRLGDSPSESQYWRYDDPKKRQKHGAGDSDLLCFKFMSTGSCPRGETCRFQHDVATHEQYLRGVCFDFLIKGKCERGPECKFKHVLQNEGEINSQKGSTCEPAGTNRSEECWFCLSSANVESHLIISISESYYCALAKGPLVHDHVLIVPIEHLPTTLALASESEIELGRFQSSLRKCYKKQGMEVVFFEWVSKRIRHANLQVIPIPAARAPVVQNIFDLAAQKLGFKFETVHMISVNDSSVGRKALKEKFDGSCSFFYVELPEGKVLLHLAEENEKFPAQFGRELCVEILRFRFGWDEDGDASDASAGSVLPPPLALLHSLTALPPTTSKGAVAPLSGSSPPHNLSPQPFNVQSQVPSIAPSEAQTKAPIENPPFSVAPAPFESPSKILPQYAPSRPPTADVGNMDGPMAPFAGPLAPEHDIPPSFATSPTTPSKKMIKVPASAPYINMPKEAPRTYKGPSPDRSMRHSHYAHPPFSSPNPPFSQRDYRPASSPAISYTKHNHSRSKIISPPPAPSYPVSSQTPAVSPSFLPRSKTRDHSPTPSNSAPRISPFHSFPLPPRHVSPTPYPSQNVPSGTAHVPVSPSKVWPAKPSMNSPKTPLLPPLKAFPSPPPNPDCLGTICTDPYTNTLSNSPCGCALPIQVGLRLGIYLYTFFPLVSEMAKEIAASIFLKQSQVRIIGASAANQQAQKTVVLIDLVPLGEKFDFTTALLTYHRFWLKQVAIKASFFGDYEVLYVKYPGLPPSPPGVPVINSQPYSRNNNNNNNNNGRTIKPIGVDVHSRRHNDRFTGGMIAIIALSTLLAVVFCIAGAWNFVFRQRDCFRPQKAVPEALLSSLSKPSGMAGSTMGSMRSYVSLSLESSMATYTGSAKTFSANDMERATNHFDPSRILGEGGFGCVYSGVLESGTKVAVKVLKRDDHHGGREFCAEVEMLSRLHHRNLVKLIGICTEDHMRCLVYELIPNGSVESHLHGVDKEKTPLDWITRVKIALGAARGLAYLHEDSSPRVIHRDFKASNILLECDFTPKVSDFGLARTAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARSLLTSREGLELIIDKSLGSNAPFDSIAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDEKREAGSRGSSREEISIDMDADPVHRGLRQYPHSFYGQYSPPNFDNGMDSETRLSISELLSSSARFQMQESRSLQRQSSSGPLSSRRGRPIWQRMRFSSESVSESRFNTRFWPGSN 1602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5295649 5309924 - BLOR20513 Blo08g00343 64295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00343 1602 Gene3D Phosphorylase Kinase; domain 1 1175 1280 - -
Blo08g00343 1602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1327 1339 IPR008271 GO:0004672|GO:0006468
Blo08g00343 1602 SMART c3hfinal6 350 375 IPR000571 GO:0046872
Blo08g00343 1602 SMART c3hfinal6 382 407 IPR000571 GO:0046872
Blo08g00343 1602 Gene3D Transferase(Phosphotransferase) domain 1 1281 1502 - -
Blo08g00343 1602 ProSitePatterns Protein kinases ATP-binding region signature. 1211 1233 IPR017441 GO:0005524
Blo08g00343 1602 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 595 1601 - -
Blo08g00343 1602 MobiDBLite consensus disorder prediction 1553 1576 - -
Blo08g00343 1602 ProSiteProfiles Zinc finger C3H1-type profile. 353 376 IPR000571 GO:0046872
Blo08g00343 1602 MobiDBLite consensus disorder prediction 842 873 - -
Blo08g00343 1602 Pfam Protein similar to CwfJ C-terminus 1 426 539 IPR006768 -
Blo08g00343 1602 MobiDBLite consensus disorder prediction 1553 1572 - -
Blo08g00343 1602 CDD STKc_IRAK 1211 1479 - -
Blo08g00343 1602 MobiDBLite consensus disorder prediction 804 828 - -
Blo08g00343 1602 Pfam Protein tyrosine and serine/threonine kinase 1209 1478 IPR001245 GO:0004672|GO:0006468
Blo08g00343 1602 MobiDBLite consensus disorder prediction 1489 1509 - -
Blo08g00343 1602 PANTHER OS01G0750732 PROTEIN 595 1601 - -
Blo08g00343 1602 MobiDBLite consensus disorder prediction 651 675 - -
Blo08g00343 1602 Gene3D - 337 409 - -
Blo08g00343 1602 MobiDBLite consensus disorder prediction 767 874 - -
Blo08g00343 1602 SUPERFAMILY Protein kinase-like (PK-like) 1184 1478 IPR011009 -
Blo08g00343 1602 Gene3D - 426 545 IPR036265 -
Blo08g00343 1602 ProSiteProfiles Protein kinase domain profile. 1205 1481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00343 1602 ProSiteProfiles Zinc finger C3H1-type profile. 380 408 IPR000571 GO:0046872
Blo08g00343 1602 SUPERFAMILY HIT-like 427 529 IPR036265 -
Blo08g00343 1602 SUPERFAMILY CCCH zinc finger 353 377 IPR036855 GO:0046872
Blo08g00343 1602 CDD MPP_CWF19_N 63 271 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00343 Blo-Chr8:5295649 Blo12g00288 Blo-Chr12:17085939 9.39E-98 dispersed
Blo01g00097 Blo-Chr1:1391699 Blo08g00343 Blo-Chr8:5295649 3.70E-13 transposed
Blo07g00596 Blo-Chr7:17677390 Blo08g00343 Blo-Chr8:5295649 5.97E-117 transposed
Blo10g00615 Blo-Chr10:18934834 Blo08g00343 Blo-Chr8:5295649 0 transposed
Blo05g00055 Blo-Chr5:538324 Blo08g00343 Blo-Chr8:5295649 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12733 PF07714 PK_Tyr_Ser-Thr 8.70E-49 CL0016 Blo TF
84442 PF07714 PK_Tyr_Ser-Thr 8.70E-49 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00343 - - vvi:100254143 1022.69