Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo08g00352 | ATGCGATCAACCCTCGTGCAAAAACTGGAAAAACATGTTTTTCATGAATATCTTGCATTTTTTAAAGAACAAATCGTTAATCTTTCTTGTGATGAACAAGAGGAAGATTATGTCCGTTTGAGGCGCTCTGTATTGGAAAGGAAATTGGCATCTTCTGATGCATCAGAAGAGGAACAAATTAATCTTCTGAAAGATTTGGAGCGTAAAGAAACTGACTATATGCGACTTAAACGGCATAAAATTTGTGTCGATGACTTTGATCTACTAACAATTATCGGACGAGGAGCCTTCGGAGAGGTAAGACTCTGCAGGGACAAGAAATCCGGCAACATTTACGCCATGAAAAAGTTGAAGAAATCGGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCAGAAAGGAACTTACTTGCTGAAGTTGCCAGCCACTGCATTGTTAAACTCTATTATTCCTTTCAAGATACTGAATATTTATATCTAATTATGGAGTATCTACCTGGAGGTGATATGATGACTTTGCTGATTAGAGAGGAAACTTTGACCGAAACTGTCGCTAAATTTTACATCGCTCAAAGTGTTCTTGCAATCGAGTCTATTCATAAGCATAATTACATTCATAGAGACATAAAACCCGACAATCTTCTTCTAGACAAAAATGGTCACATGAAACTATCAGATTTTGGTCTCTGTAAACCTCTGGACTGCTCAAATTTATCCTCGATAAATGAAAATGAAGTTCTAGATGATAAGAACTTGAATGAAACAATGGACGTCGATGAATCCTCTCCAGCTACTGTAAGCGGAAGACGATGGAAGAGTCCTCTCGAACAACTTCAGCACTGGCAGATTAACAGGAGGAAGCTGGCGTATTCCACTGTTGGCACTCCCGACTATATCGCTCCAGAAGTATTGCTGAAGAAAGGATACGGCATGGAGTGTGACTGGTGGTCCCTTGGTGCAATACTGTATGAGATGCTTGTTGGTTATCCTCCATTTTATGCCGATGATCCAGTAACAACCTGCAGGAAGATTGTGCATTGGAGGAATCACTTGAAATTTCCTAATGAAACAAGGCTTTCGCCCGAAGTGAAGGATCTAATATCGAGGCTTCTCTGTGATGTTGAGCACAGGCTTGGTATAGGAGGAGCTGATCGAATCAAAGCTCACCCTTGGTTCAAAGATGTGGCATGGGACAAACTCTATGAAATGGAGGCAGCATTTAAACCCGAGGTCAACGGGGAACTTGACACTCAAAATTTTATGAAGTTCGATGAGGTGGAACAAGCAACCACTAGAGCTGGATCGGGACCAATGAGGAAGATGCTGTTGACTCCAAAGGATTTAAGTTTTGTTGGCTACACATACAAGAATTTCGAGGCTGTCAAAGGAGTTCTCCGCTCTTTGGGTACGTAA | 1416 | 41.31 | MRSTLVQKLEKHVFHEYLAFFKEQIVNLSCDEQEEDYVRLRRSVLERKLASSDASEEEQINLLKDLERKETDYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCRDKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLIREETLTETVAKFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSSINENEVLDDKNLNETMDVDESSPATVSGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAILYEMLVGYPPFYADDPVTTCRKIVHWRNHLKFPNETRLSPEVKDLISRLLCDVEHRLGIGGADRIKAHPWFKDVAWDKLYEMEAAFKPEVNGELDTQNFMKFDEVEQATTRAGSGPMRKMLLTPKDLSFVGYTYKNFEAVKGVLRSLGT | 471 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5513656 | 5517156 | + | BLOR20522 | Blo08g00352 | 64304 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo08g00352 | 471 | ProSiteProfiles | Protein kinase domain profile. | 86 | 393 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Blo08g00352 | 471 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 41 | 466 | - | - | |
Blo08g00352 | 471 | Pfam | Protein kinase domain | 88 | 237 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Blo08g00352 | 471 | Pfam | Protein kinase domain | 284 | 393 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Blo08g00352 | 471 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 394 | 466 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Blo08g00352 | 471 | SMART | pkinase_C_6 | 394 | 458 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Blo08g00352 | 471 | Gene3D | Transferase(Phosphotransferase) domain 1 | 170 | 235 | - | - | |
Blo08g00352 | 471 | Gene3D | Transferase(Phosphotransferase) domain 1 | 292 | 411 | - | - | |
Blo08g00352 | 471 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 41 | 466 | - | - | |
Blo08g00352 | 471 | SMART | serkin_6 | 86 | 393 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Blo08g00352 | 471 | Gene3D | Phosphorylase Kinase; domain 1 | 84 | 169 | - | - | |
Blo08g00352 | 471 | Gene3D | Phosphorylase Kinase; domain 1 | 412 | 422 | - | - | |
Blo08g00352 | 471 | SUPERFAMILY | Protein kinase-like (PK-like) | 83 | 431 | IPR011009 | - | |
Blo08g00352 | 471 | ProSitePatterns | Protein kinases ATP-binding region signature. | 92 | 115 | IPR017441 | GO:0005524 | |
Blo08g00352 | 471 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 205 | 217 | IPR008271 | GO:0004672|GO:0006468 | |
Blo08g00352 | 471 | CDD | STKc_NDR_like | 84 | 457 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g01457 | Blo-Chr1:53680900 | Blo08g00352 | Blo-Chr8:5513656 | 0 | dispersed | |
Blo06g01092 | Blo-Chr6:34219324 | Blo08g00352 | Blo-Chr8:5513656 | 3.71E-79 | dispersed | |
Blo08g00352 | Blo-Chr8:5513656 | Blo14g00435 | Blo-Chr14:5008763 | 0 | dispersed | |
Blo08g00352 | Blo-Chr8:5513656 | Blo06g00514 | Blo-Chr6:27285544 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
84443 | PF00069 | Pkinase | 3.30E-43 | CL0016 | Blo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo08g00352 | K08790 | - | cit:102622557 | 780.785 |