Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00352 ATGCGATCAACCCTCGTGCAAAAACTGGAAAAACATGTTTTTCATGAATATCTTGCATTTTTTAAAGAACAAATCGTTAATCTTTCTTGTGATGAACAAGAGGAAGATTATGTCCGTTTGAGGCGCTCTGTATTGGAAAGGAAATTGGCATCTTCTGATGCATCAGAAGAGGAACAAATTAATCTTCTGAAAGATTTGGAGCGTAAAGAAACTGACTATATGCGACTTAAACGGCATAAAATTTGTGTCGATGACTTTGATCTACTAACAATTATCGGACGAGGAGCCTTCGGAGAGGTAAGACTCTGCAGGGACAAGAAATCCGGCAACATTTACGCCATGAAAAAGTTGAAGAAATCGGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCAGAAAGGAACTTACTTGCTGAAGTTGCCAGCCACTGCATTGTTAAACTCTATTATTCCTTTCAAGATACTGAATATTTATATCTAATTATGGAGTATCTACCTGGAGGTGATATGATGACTTTGCTGATTAGAGAGGAAACTTTGACCGAAACTGTCGCTAAATTTTACATCGCTCAAAGTGTTCTTGCAATCGAGTCTATTCATAAGCATAATTACATTCATAGAGACATAAAACCCGACAATCTTCTTCTAGACAAAAATGGTCACATGAAACTATCAGATTTTGGTCTCTGTAAACCTCTGGACTGCTCAAATTTATCCTCGATAAATGAAAATGAAGTTCTAGATGATAAGAACTTGAATGAAACAATGGACGTCGATGAATCCTCTCCAGCTACTGTAAGCGGAAGACGATGGAAGAGTCCTCTCGAACAACTTCAGCACTGGCAGATTAACAGGAGGAAGCTGGCGTATTCCACTGTTGGCACTCCCGACTATATCGCTCCAGAAGTATTGCTGAAGAAAGGATACGGCATGGAGTGTGACTGGTGGTCCCTTGGTGCAATACTGTATGAGATGCTTGTTGGTTATCCTCCATTTTATGCCGATGATCCAGTAACAACCTGCAGGAAGATTGTGCATTGGAGGAATCACTTGAAATTTCCTAATGAAACAAGGCTTTCGCCCGAAGTGAAGGATCTAATATCGAGGCTTCTCTGTGATGTTGAGCACAGGCTTGGTATAGGAGGAGCTGATCGAATCAAAGCTCACCCTTGGTTCAAAGATGTGGCATGGGACAAACTCTATGAAATGGAGGCAGCATTTAAACCCGAGGTCAACGGGGAACTTGACACTCAAAATTTTATGAAGTTCGATGAGGTGGAACAAGCAACCACTAGAGCTGGATCGGGACCAATGAGGAAGATGCTGTTGACTCCAAAGGATTTAAGTTTTGTTGGCTACACATACAAGAATTTCGAGGCTGTCAAAGGAGTTCTCCGCTCTTTGGGTACGTAA 1416 41.31 MRSTLVQKLEKHVFHEYLAFFKEQIVNLSCDEQEEDYVRLRRSVLERKLASSDASEEEQINLLKDLERKETDYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCRDKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDMMTLLIREETLTETVAKFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSSINENEVLDDKNLNETMDVDESSPATVSGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAILYEMLVGYPPFYADDPVTTCRKIVHWRNHLKFPNETRLSPEVKDLISRLLCDVEHRLGIGGADRIKAHPWFKDVAWDKLYEMEAAFKPEVNGELDTQNFMKFDEVEQATTRAGSGPMRKMLLTPKDLSFVGYTYKNFEAVKGVLRSLGT 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5513656 5517156 + BLOR20522 Blo08g00352 64304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00352 471 ProSiteProfiles Protein kinase domain profile. 86 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00352 471 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 466 - -
Blo08g00352 471 Pfam Protein kinase domain 88 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00352 471 Pfam Protein kinase domain 284 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00352 471 ProSiteProfiles AGC-kinase C-terminal domain profile. 394 466 IPR000961 GO:0004674|GO:0005524|GO:0006468
Blo08g00352 471 SMART pkinase_C_6 394 458 IPR000961 GO:0004674|GO:0005524|GO:0006468
Blo08g00352 471 Gene3D Transferase(Phosphotransferase) domain 1 170 235 - -
Blo08g00352 471 Gene3D Transferase(Phosphotransferase) domain 1 292 411 - -
Blo08g00352 471 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 41 466 - -
Blo08g00352 471 SMART serkin_6 86 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00352 471 Gene3D Phosphorylase Kinase; domain 1 84 169 - -
Blo08g00352 471 Gene3D Phosphorylase Kinase; domain 1 412 422 - -
Blo08g00352 471 SUPERFAMILY Protein kinase-like (PK-like) 83 431 IPR011009 -
Blo08g00352 471 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Blo08g00352 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Blo08g00352 471 CDD STKc_NDR_like 84 457 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01457 Blo-Chr1:53680900 Blo08g00352 Blo-Chr8:5513656 0 dispersed
Blo06g01092 Blo-Chr6:34219324 Blo08g00352 Blo-Chr8:5513656 3.71E-79 dispersed
Blo08g00352 Blo-Chr8:5513656 Blo14g00435 Blo-Chr14:5008763 0 dispersed
Blo08g00352 Blo-Chr8:5513656 Blo06g00514 Blo-Chr6:27285544 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84443 PF00069 Pkinase 3.30E-43 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00352 K08790 - cit:102622557 780.785