Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00378 ATGAAGAGGGTGGAAAGGAGATTAGAGATGGTAATGATGGGTCAAAAAGGGAAAAAGGAGAATGCAAACGCAGAGAAACGAGGTGGGTCGCACACCTCCTCCTGTGACGAGGGTTCTTCCGTTTCCATGGCTGCCCCCAATCCGAATTCAATTGGTATTCTCAATGCCCAAAACTCTCTGCAGTCCATCTGCTACGAACCCGGGTCCCTTCGTCTTCTCGATCAGAGAAAGCTTCCTCTTGAAACTATTTATCTGGATATCAAGGATACAACAGATGGATGGCATGCAATAAGTGATATGGTGGTCCGTGGAGCACCTGCAATTGCAATTGCAGCCGCACTCTCTTTGGCTGTCGAAGTTTTTAACTTCAAGGATTTTCGAGGGACCTCTAATGATGCAGCTACTTTTCTTGGCAATAAGCTGGATTACCTCGTTTCCAGCCGGCCCACTGCTGTGAATCTCTCTGATGCTGCCACAAAACTCAAACAAATAGTATCAGAGGCATCTTCTACTTCTTCGGAAGCCAGCAGCATTTTCCAGGCCTACATTGAGGCTGCTGAATATATGCTTAAGGACGATGTTGCTTCAAATAAAGCGATTGGGTCATATGGAGCAGATTTTATTCAGCATCAACAGAAAACATTGAACAAACTCTCTGTTCTAACCCACTGCAACACTGGCAGTCTTGCGACGGCTGGATATGGTACTGCCCTGGGTGTGATCCGCTCACTTCATGCTGAAGGAGTCTTAGAAAGGGCCTACTGTACTGAAACAAGGCCATTTAATCAAGGATCCAGATTGACAGCATATGAGTTGGTGCATGAAAAAATACCTGCCACTCTCGTTGCAGATTCTGCTGCAGCTGCACTTATGCAACTTGGACGTGTGAATGCTGCCATTGTTGGAGCAGATCGTGTGGCTGCCAACGGCGATACGGCTAACAAGATTGGAACTTACAATCTGGCCTTGAGTGCAATGTATCACAAGGTCCCGTTTTATGTGGCAGCCCCATTGACTTCCATAGATTTATCTCTTTCTTCTGGCAAAGCGATTGTCATTGAAGAACGGTCGCCCAAAGAGTTGTTGCACACCCGGGGCGGTCTTGGGGAGCAAGTTGCAGCTTCTGGAATCTCAGTTTGGAATCCGGCATTTGATGTGACCCCAGCTTCTCTCATATCAGGGATCATAACAGAAAAGGGTGTGATCACCAAGGAGAGTGGTGATGTTTTCGACATTAAGGGATTTGTCAAGCGCAGAGGTGGGCAAGCTGCTGTGTAG 1278 47.18 MKRVERRLEMVMMGQKGKKENANAEKRGGSHTSSCDEGSSVSMAAPNPNSIGILNAQNSLQSICYEPGSLRLLDQRKLPLETIYLDIKDTTDGWHAISDMVVRGAPAIAIAAALSLAVEVFNFKDFRGTSNDAATFLGNKLDYLVSSRPTAVNLSDAATKLKQIVSEASSTSSEASSIFQAYIEAAEYMLKDDVASNKAIGSYGADFIQHQQKTLNKLSVLTHCNTGSLATAGYGTALGVIRSLHAEGVLERAYCTETRPFNQGSRLTAYELVHEKIPATLVADSAAAALMQLGRVNAAIVGADRVAANGDTANKIGTYNLALSAMYHKVPFYVAAPLTSIDLSLSSGKAIVIEERSPKELLHTRGGLGEQVAASGISVWNPAFDVTPASLISGIITEKGVITKESGDVFDIKGFVKRRGGQAAV 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6294316 6302378 - BLOR20548 Blo08g00378 64330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00378 425 Gene3D - 251 415 IPR042529 -
Blo08g00378 425 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 61 404 IPR005251 -
Blo08g00378 425 Pfam Initiation factor 2 subunit family 102 403 IPR000649 GO:0044237
Blo08g00378 425 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 58 417 - -
Blo08g00378 425 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 87 404 IPR011559 GO:0044249
Blo08g00378 425 SUPERFAMILY NagB/RpiA/CoA transferase-like 58 406 IPR037171 -
Blo08g00378 425 MobiDBLite consensus disorder prediction 12 42 - -
Blo08g00378 425 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 60 413 IPR005251 -
Blo08g00378 425 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 58 417 - -
Blo08g00378 425 MobiDBLite consensus disorder prediction 12 32 - -
Blo08g00378 425 Gene3D - 58 250 IPR027363 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00378 Blo-Chr8:6294316 Blo01g00695 Blo-Chr1:8332611 1.10E-07 dispersed
Blo05g00020 Blo-Chr5:188897 Blo08g00378 Blo-Chr8:6294316 8.58E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00378 K08963 - csv:101210526 565.459