Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00396 ATGGCGGAAGGTCTTCTTCTTCATGGGGTTCTGCAAGTCACAATCTTCGAGATCGATAAGCTGTCTGGTAATTGCTGCTGCGATTTCTTTCCCAAGATTAAGAAAAATAAGGAAAAGGGTCGGTCAGCAAAGCTTTATGTAACAGTGGATCTAGGAAATGCTAGAGTTGGGAGAACTAGATTAATAGATGACAAAGAACGTAATCCAAAATGGTTTGAATCTTTGCATATTTACTGTGCCCACAAGGCTTCAACAGTTATATTCTCTATAAAGGAAGGCTTACCCATTGGGAGTAAAGTAATTGGGAAAGCTTCGATGGCTGCAGATAAGCTTCTAACCGGAGAAAGTATTAATAAATGGCTCCCAATTTTTGACAGTAAACACAAGCCACTCCATGGAAGATCTAAACTTCACGTGAATTTGCAGTTCTTTCATGTCAGCAAAGATGATAGCTGGTCACGAGGAATATCCAGCCTCGATTTTGAAGGAGTTCCATTTACTTTCTTCAGACAGAGAAATGGCTGCAAAGTTACACTTTATCAAGACGCTCACGTCCCGGTTGAGTTCACCCCCAAAATATCTCTTGATGGAAACAAGACGTATGAGCCTAATAGGTGTTGGGAAGATGTTTTTGATGCTATTTCTAATGCTAAGCACTTGATTTATATTGCTGGGTGGTCAGTCTACACTAAGATTGCATTAATTCGCGACGTTAATCGGGGAAAACCTGGCCGCGATGTGACACTTGGAGAGCTTCTCGTGAAGAAGGCCGAGGAAGGAGTTAGGGTTCTAATGCTTGTATGGGATGACAAAACTTCAGTGAAGTTGCTCAAGAAAGATGGATTAATGGCTACTCATGATGAAGATACAGCAAAATACTTTCACAATTCAGGTGTTCATTGTGTTTTATGCCCTAGAAATCCAGATAATGGGAAGAGCTTAGTTCAAGGAATGCAGATTTCCACTATGTTTACTCATCATCAGAAGACAATAGTTGTGGACAAAGAGATTTCGGTTTCGCATGAAATATCGTCGGATAAACGAAGAATAGTGAGTTTTATTGGAGGAATTGATCTTTGTGATGGGAGATATGATACTCCATTTCACTGTATTTTTAGAACTCTTGGTTCGACCCATCAAAATGATTATCATCAACCTTGTTTTTCTGCTGCGACGGTCAAGAAAGGCGGTCCCAGAGAGCCATGGCATGACGTTCATTGCCGCTTGGAAGGGCCGATTGCATGGGACGTTCTAATCAATTTCGAGCAGAGATGGAGGAAACAGTCTGAAGGAAAGACAGATTTGCTTGTTAAGGTTGAAGAGCTTGCCGAGATTTTCATACCCACTTCGCCGGCTTCTTCGGTGAAAGATCCAGAAACTTGGAATGTCCAGCTTTTTCGGTCCATTGATGGCGGCTCTGCGTTAGGGTTTCCATCGGATCCACGGGAGGCTGCAAAAGCTGGTCTTAGAAACTATAAGAATTCCACAGTTGAAAGAAGCATTCAAGATGCTTATATCCACGCCATTAGAAGAGCAAAACGCTTCATTTACATTGAAAACCAGTATTTCCTAGGAAGCTCATATAGCTGGAAGAATCAAAACGACAATGTCGGCGCCCTGAACCTAATTCCCAAAGAACTTTCACTAAAGATCGTGAGCAAGATTTTAGCCGGAGAGAGATTTGCGGTATACATAGTTATTCCTATGTGGCCGGAGGGTGTGCCGGAAAGTGGATCAGTTCAGGCAATACTGAACTGGCAAAGAAAGACGATGGAAATGATGTATAGAGATGTGGCTGAGGCCATTAAAGCAAAGAATATTGAAGCAGACCCTAGAGATTACTTGGCATTCTTCTGCCTCGGAAACAAAGAGAAGAAGATGGAGGGAGAATATGAACCTCCAGAAAAACCACAACACGATACAGATTACAGTAGAGCTCAAAAAGCTAGACGTTTTATGATCTACGTTCATTCCAAGACCATGATAGTTGACGATGAATACATAATAATTGGATCAGCCAACATCAACCAGAGGTCAATGGATGGAGGTAGAGACACAGAGATAGCCATGGGCGCTTACCAGCCCCACCACCTAGCCACCAACCAGCTAGCAAGAGGTCAAATTCATGGCTTCAGAATGGCCCTATGGCTAGAGCATCTAAGCCGGCTTGATGACTCCTTTCTAGCCCCAGACAGTTTAGAATCCATTCGAAAAGTGAACCACATCTCCGACACTTACCTGAAACTCTACTTGTCCGAGGAGACGGACGATTTGCCGGGCCATTTACTCAGTTATCCGATACGTGTTACTGACACTGGAGAAGTTACAAGTTTAGCTGGTGTGCAGTTCTTTTCTGATAGTAAAGCTAGAGTTTGTGGGTCTAAATCTGATCTTCTTCCTCCCATCCTAACTACTTGA 2418 42.72 MAEGLLLHGVLQVTIFEIDKLSGNCCCDFFPKIKKNKEKGRSAKLYVTVDLGNARVGRTRLIDDKERNPKWFESLHIYCAHKASTVIFSIKEGLPIGSKVIGKASMAADKLLTGESINKWLPIFDSKHKPLHGRSKLHVNLQFFHVSKDDSWSRGISSLDFEGVPFTFFRQRNGCKVTLYQDAHVPVEFTPKISLDGNKTYEPNRCWEDVFDAISNAKHLIYIAGWSVYTKIALIRDVNRGKPGRDVTLGELLVKKAEEGVRVLMLVWDDKTSVKLLKKDGLMATHDEDTAKYFHNSGVHCVLCPRNPDNGKSLVQGMQISTMFTHHQKTIVVDKEISVSHEISSDKRRIVSFIGGIDLCDGRYDTPFHCIFRTLGSTHQNDYHQPCFSAATVKKGGPREPWHDVHCRLEGPIAWDVLINFEQRWRKQSEGKTDLLVKVEELAEIFIPTSPASSVKDPETWNVQLFRSIDGGSALGFPSDPREAAKAGLRNYKNSTVERSIQDAYIHAIRRAKRFIYIENQYFLGSSYSWKNQNDNVGALNLIPKELSLKIVSKILAGERFAVYIVIPMWPEGVPESGSVQAILNWQRKTMEMMYRDVAEAIKAKNIEADPRDYLAFFCLGNKEKKMEGEYEPPEKPQHDTDYSRAQKARRFMIYVHSKTMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAYQPHHLATNQLARGQIHGFRMALWLEHLSRLDDSFLAPDSLESIRKVNHISDTYLKLYLSEETDDLPGHLLSYPIRVTDTGEVTSLAGVQFFSDSKARVCGSKSDLLPPILTT 805
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7090786 7098959 + BLOR20566 Blo08g00396 64348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00396 805 SMART C2_3c 10 120 IPR000008 -
Blo08g00396 805 Gene3D Endonuclease Chain A 191 447 - -
Blo08g00396 805 PANTHER PHOSPHOLIPASE D 4 805 - -
Blo08g00396 805 SUPERFAMILY Phospholipase D/nuclease 498 734 - -
Blo08g00396 805 CDD C2_plant_PLD 5 144 - -
Blo08g00396 805 Gene3D Endonuclease Chain A 472 706 - -
Blo08g00396 805 PIRSF PLD_plant 1 805 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Blo08g00396 805 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 146 IPR035892 -
Blo08g00396 805 Pfam C2 domain 11 123 IPR000008 -
Blo08g00396 805 SUPERFAMILY Phospholipase D/nuclease 149 439 - -
Blo08g00396 805 PANTHER PHOSPHOLIPASE D 4 805 IPR015679 -
Blo08g00396 805 Pfam PLD-like domain 506 689 IPR025202 -
Blo08g00396 805 Gene3D C2 domain 7 154 IPR035892 -
Blo08g00396 805 Pfam Phospholipase D C terminal 724 795 IPR024632 -
Blo08g00396 805 ProSiteProfiles C2 domain profile. 1 121 IPR000008 -
Blo08g00396 805 SMART pld_4 652 679 IPR001736 GO:0003824
Blo08g00396 805 SMART pld_4 322 363 IPR001736 GO:0003824
Blo08g00396 805 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 652 679 IPR001736 GO:0003824
Blo08g00396 805 Pfam Phospholipase D Active site motif 322 363 IPR001736 GO:0003824
Blo08g00396 805 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 322 363 IPR001736 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00130 Blo-Chr5:1211203 Blo08g00396 Blo-Chr8:7090786 0 dispersed
Blo07g00714 Blo-Chr7:23542689 Blo08g00396 Blo-Chr8:7090786 0 dispersed
Blo08g00396 Blo-Chr8:7090786 Blo18g00026 Blo-Chr18:198175 0 dispersed
Blo08g00396 Blo-Chr8:7090786 Blo06g00662 Blo-Chr6:29610978 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00396 K01115 - qsu:111988169 1139.79