Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00422 ATGGGGGAAGCTTTTGCACAAGGAGCTTTTGGAAAACTTTATCGAGGTACTTACAATGGTGAAGATGTTGCTATCAAAATCTTGGAGAGGCCAGATAATGATATTGTGAAGGCTCTGTCGATGGAGCAACAGTTTCAGCAGGAGGTCGTCATGTTGGCTACGTTGAAGCATCCAAATATAGTTCGTTTTATTGGTGGCTGTAGGAAGCCAATGCTTTGGTGCATTGTGACTGAATATGCAAAAGGTGGTTCAGTTCGGCAATTCTTAATGAAGCGACAAAGTCGATCAGTTCCTCTTAAACTGGCAGTCAAGCAAGCTTTAGATGTGGCAAGGGGGATGGCATATGTTCATGAGCTTGGACTAATACATCGGGACTTAAAGTCTGACAACTTGTTGATTTCTGCAGATAAATCTATAAAAATTGCTGACTTTGGAGTTGCCCGAATTGAGGTGCAGACTGAAGGAATGACGCCTGAGACTGGCACATACCGCTGGATGGCTCCGGAGATGATCCAGCACAGGCCCTACACACAAAAAGTAGATGTATATAGCTTCGGCATTGTTCTTTGGGAACTCATAACTGGAATGCTTCCGTTCCAAAATATGACGGCTGTACAGGCTGCATTTGCAGTTGTGAACAAGGCTTTTCGTCCTGTCATCCCCAATGATTGCTTACCTGTTCTCAGTGAGATAATGACAAGCTGCTGGGATGCCAATCCAAATGTTAGACCGCACTTCACAGAGGTGGTCAGAATGCTGGAGCATGCCCAAACTGAGATCATGACAAGCATCCGAAAGGCCCGTTTTAGGTGTTGCATTGCCGAGCCTGAAACTGCCGACTGA 843 45.43 MGEAFAQGAFGKLYRGTYNGEDVAIKILERPDNDIVKALSMEQQFQQEVVMLATLKHPNIVRFIGGCRKPMLWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMAYVHELGLIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKAFRPVIPNDCLPVLSEIMTSCWDANPNVRPHFTEVVRMLEHAQTEIMTSIRKARFRCCIAEPETAD 280
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 8287756 8294501 + BLOR20592 Blo08g00422 64374
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00422 280 SMART serkin_6 1 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00422 280 Gene3D Transferase(Phosphotransferase) domain 1 82 275 - -
Blo08g00422 280 ProSiteProfiles Protein kinase domain profile. 1 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo08g00422 280 CDD STKc_MAP3K-like 6 253 - -
Blo08g00422 280 SUPERFAMILY Protein kinase-like (PK-like) 5 253 IPR011009 -
Blo08g00422 280 PANTHER SERINE-THREONINE PROTEIN KINASE 1 266 - -
Blo08g00422 280 PRINTS Tyrosine kinase catalytic domain signature 115 133 IPR001245 GO:0004672|GO:0006468
Blo08g00422 280 PRINTS Tyrosine kinase catalytic domain signature 161 171 IPR001245 GO:0004672|GO:0006468
Blo08g00422 280 PRINTS Tyrosine kinase catalytic domain signature 224 246 IPR001245 GO:0004672|GO:0006468
Blo08g00422 280 PRINTS Tyrosine kinase catalytic domain signature 180 202 IPR001245 GO:0004672|GO:0006468
Blo08g00422 280 PRINTS Tyrosine kinase catalytic domain signature 77 90 IPR001245 GO:0004672|GO:0006468
Blo08g00422 280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Blo08g00422 280 PIRSF ILK 1 271 - -
Blo08g00422 280 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Blo08g00422 280 Pfam Protein tyrosine and serine/threonine kinase 2 253 IPR001245 GO:0004672|GO:0006468
Blo08g00422 280 PANTHER BNAA09G41440D PROTEIN 1 266 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Blo08g00422 Blo14g00757 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00422 Blo-Chr8:8287756 Blo16g00238 Blo-Chr16:5450718 1.57E-95 dispersed
Blo11g00647 Blo-Chr11:6736970 Blo08g00422 Blo-Chr8:8287756 1.09E-46 dispersed
Blo17g00337 Blo-Chr17:3509438 Blo08g00422 Blo-Chr8:8287756 3.16E-67 dispersed
Blo18g00343 Blo-Chr18:3574431 Blo08g00422 Blo-Chr8:8287756 1.15E-69 dispersed
Blo18g00740 Blo-Chr18:19978075 Blo08g00422 Blo-Chr8:8287756 3.00E-18 transposed
Blo14g00757 Blo-Chr14:22119798 Blo08g00422 Blo-Chr8:8287756 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84446 PF07714 PK_Tyr_Ser-Thr 1.40E-66 CL0016 Blo PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00422 - - pmum:103324302 516.153