Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo08g00468 ATGGATTCTTCGTCTCAAAACTGGCTTGGATTCTCTCTCTCTAACCCCTCTCATTTCTCTCTCTTCCACGCTTTCGACTCTACTTCTCCTCAAGGTAGTCTCGTAGTGGATAAAGGAGAAAAACAAGATGCACAGTCCGCAGGTACCGACCTCTCCATTTTTACTGGCCGCCCGAAGCTCGAGAACTTTCTGGGTGGCCCGACTGTGACAGGAGCTCCGGCTCCGACGCCAGCTCATTTCTCTGCTGAAAATGAAATCTATGAGTCCGAGCTCAAAACCATAGCCACGAGCTTCCTTCGTGGATATGCCGCCGAACAAGTCGACGTCAGAAATCAGTCACCTGTACCGGAATCTGCGCCGATGGTTCAGTCCGAGCACTGTGTGAAGAAGGCGCTCGATACATTTGGCCAGCGTACGTCGATTTACCGCGGCGTTACGAGACATAGATGGACTGGTAGATATGAAGCTCATTTGTGGGATAACAGTTGCAGACGAGAAGGTCAGAGTAGAAAAGGAAGACAAGGAGGATATGATAAGGAAGATAAAGCGGCTAGAGCTTATGATCTTGCTGCCCTTAAGTACTGGGGTCCGACCACCACTACAAACTTTTCTGTCAGCATCTATGAGAAGGAGCTGGAGGAGATGAAGAACATGACCAGACAAGAATTTGTTGCGTCGCTTAGAAGGAAAAGTAGTGGGTTTTCTCGAGGAGCCTCCATTTATAGAGGAGTGACAAGGCATCATCAACATGGTAGGTGGCAAGCAAGGATTGGGAGAGTTGCAGGCAACAAAGATCTCTATCTTGGAACATTCAGTACTCAAGAAGAAGCTGCAGAAGCATATGACATTGCCGCCATAAAATTCAGAGGCCTCAATGCAGTGACCAACTTCGACATGAGCCGCTACGACATCAAAAGCATCGCCACTACAAACCTTCCGATTGGAGGAATTGCCGGAAAATCTAAAACCTCCTCCGATTCCATCTCCGATAGCAAGAGTCTCAACGGAAACCACTCGGACGATAGAGATCATTCAGCTTCCTCTTCTTCACCCTTCCTGGCTCAACCTAACACCTCTGCATTAGCCTTCTCCATGCCTATCAAACAAGACCAATCAGATAATTACTGGCCAATGCTCAGCTACCAAAACAGTTCCTTCCTCAATTCTAGAAACCCTAACCCACCATTTTCCACGGAGTTTTCCTCTGGTTCTTCAGTTGATGAAGGCTATAACACTAATCAGCAAAATGGGGGTCATTCTAATCAGATTTCAAGTCAGTTTTCAACACCCATTTGCTTAAATGGTGAGATGAACGCTTATGAAGATTCAAATAATCCTGGGTATGGAAACCTGGTAGGGCAAACGATGTATTCTATACCTAATTTTTTTCAGACTGCCATTTTTGGTGTGGAATGA 1416 46.4 MDSSSQNWLGFSLSNPSHFSLFHAFDSTSPQGSLVVDKGEKQDAQSAGTDLSIFTGRPKLENFLGGPTVTGAPAPTPAHFSAENEIYESELKTIATSFLRGYAAEQVDVRNQSPVPESAPMVQSEHCVKKALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEDKAARAYDLAALKYWGPTTTTNFSVSIYEKELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDIKSIATTNLPIGGIAGKSKTSSDSISDSKSLNGNHSDDRDHSASSSSPFLAQPNTSALAFSMPIKQDQSDNYWPMLSYQNSSFLNSRNPNPPFSTEFSSGSSVDEGYNTNQQNGGHSNQISSQFSTPICLNGEMNAYEDSNNPGYGNLVGQTMYSIPNFFQTAIFGVE 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10549400 10552570 + BLOR20638 Blo08g00468 64420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo08g00468 471 ProSiteProfiles AP2/ERF domain profile. 240 298 IPR001471 GO:0003700|GO:0006355
Blo08g00468 471 MobiDBLite consensus disorder prediction 316 334 - -
Blo08g00468 471 MobiDBLite consensus disorder prediction 315 352 - -
Blo08g00468 471 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL5 8 426 - -
Blo08g00468 471 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 426 - -
Blo08g00468 471 SMART rav1_2 141 210 IPR001471 GO:0003700|GO:0006355
Blo08g00468 471 SMART rav1_2 240 304 IPR001471 GO:0003700|GO:0006355
Blo08g00468 471 Pfam AP2 domain 240 290 IPR001471 GO:0003700|GO:0006355
Blo08g00468 471 Pfam AP2 domain 141 196 IPR001471 GO:0003700|GO:0006355
Blo08g00468 471 SUPERFAMILY DNA-binding domain 239 300 IPR016177 GO:0003677
Blo08g00468 471 PRINTS Ethylene responsive element binding protein signature 280 300 IPR001471 GO:0003700|GO:0006355
Blo08g00468 471 PRINTS Ethylene responsive element binding protein signature 142 153 IPR001471 GO:0003700|GO:0006355
Blo08g00468 471 CDD AP2 140 206 IPR001471 GO:0003700|GO:0006355
Blo08g00468 471 SUPERFAMILY DNA-binding domain 140 206 IPR016177 GO:0003677
Blo08g00468 471 CDD AP2 239 300 IPR001471 GO:0003700|GO:0006355
Blo08g00468 471 MobiDBLite consensus disorder prediction 390 425 - -
Blo08g00468 471 Gene3D AP2/ERF domain 141 206 IPR036955 GO:0003700|GO:0006355
Blo08g00468 471 Gene3D AP2/ERF domain 240 300 IPR036955 GO:0003700|GO:0006355
Blo08g00468 471 ProSiteProfiles AP2/ERF domain profile. 141 204 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01123 Blo-Chr4:18182477 Blo08g00468 Blo-Chr8:10549400 2.92E-115 dispersed
Blo08g00468 Blo-Chr8:10549400 Blo11g00401 Blo-Chr11:3476505 2.66E-116 dispersed
Blo08g00468 Blo-Chr8:10549400 Blo03g01367 Blo-Chr3:40121441 6.33E-112 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12736 PF00847 AP2 5.50E-09 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo08g00468 K09285 - jre:108998775 542.347